RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 SECISBP2LQ93073 1101 aaKnown RBP8.86□□□□□ -0.99
NECAP1-213ENST00000638883 SASS6Q6UVJ0 657 aa8.86□□□□□ -0.99
NECAP1-213ENST00000638883 CERS3Q8IU89 383 aa8.86□□□□□ -0.99
NECAP1-213ENST00000638883 PDE3BQ13370 1112 aa8.85□□□□□ -0.99
NECAP1-213ENST00000638883 CCDC66A2RUB6 948 aa8.85□□□□□ -0.99
NECAP1-213ENST00000638883 RYDENQ9NUL5 291 aaKnown RBP8.85□□□□□ -0.99
NECAP1-213ENST00000638883 HNRNPMP52272 730 aaKnown RBP eCLIP8.85□□□□□ -0.99
NECAP1-213ENST00000638883 USP47Q96K76 1375 aa8.84□□□□□ -0.99
NECAP1-213ENST00000638883 KDM3BQ7LBC6 1761 aa8.84□□□□□ -0.99
NECAP1-213ENST00000638883 HSP90AB1P08238 724 aaKnown RBP8.84□□□□□ -0.99
NECAP1-213ENST00000638883 SSH2Q76I76 1423 aa8.84□□□□□ -0.99
NECAP1-213ENST00000638883 ADAMTS13Q76LX8 1427 aa8.84□□□□□ -0.99
NECAP1-213ENST00000638883 ZSCAN20P17040 1043 aaPredicted RBP8.84□□□□□ -0.99
NECAP1-213ENST00000638883 DNAJC2Q99543 621 aaKnown RBP8.84□□□□□ -0.99
NECAP1-213ENST00000638883 DDX49Q9Y6V7 483 aaKnown RBP8.84□□□□□ -0.99
NECAP1-213ENST00000638883 CHAF1AQ13111 956 aaPredicted RBP8.84□□□□□ -0.99
NECAP1-213ENST00000638883 TEX2Q8IWB9 1127 aa8.83□□□□□ -1
NECAP1-213ENST00000638883 PRR29P0C7W0 189 aa8.83□□□□□ -1
NECAP1-213ENST00000638883 KIAA2012Q0VF49 1180 aa8.83□□□□□ -1
NECAP1-213ENST00000638883 PDAP1Q13442 181 aaKnown RBP8.83□□□□□ -1
NECAP1-213ENST00000638883 COL24A1Q17RW2 1714 aa8.83□□□□□ -1
NECAP1-213ENST00000638883 SBNO2Q9Y2G9 1366 aa8.83□□□□□ -1
NECAP1-213ENST00000638883 ZNF646O15015 1829 aaPredicted RBP8.82□□□□□ -1
NECAP1-213ENST00000638883 CDCA7LQ96GN5 454 aa8.82□□□□□ -1
NECAP1-213ENST00000638883 CCDC144AA2RUR9 1427 aa8.82□□□□□ -1
NECAP1-213ENST00000638883 NUP155O75694 1391 aa8.82□□□□□ -1
NECAP1-213ENST00000638883 EFCAB3Q8N7B9 438 aa8.82□□□□□ -1
NECAP1-213ENST00000638883 A0A1B0GUL6 1792 aa8.82□□□□□ -1
NECAP1-213ENST00000638883 FXR2P51116 673 aaKnown RBP eCLIP8.82□□□□□ -1
NECAP1-213ENST00000638883 E2F4Q16254 413 aa8.82□□□□□ -1
NECAP1-213ENST00000638883 TBC1D2Q9BYX2 928 aa8.82□□□□□ -1
NECAP1-213ENST00000638883 PHF8Q9UPP1 1060 aa8.82□□□□□ -1
NECAP1-213ENST00000638883 PATL2C9JE40 543 aaKnown RBP8.81□□□□□ -1
NECAP1-213ENST00000638883 PNISRQ8TF01 805 aaKnown RBP8.81□□□□□ -1
NECAP1-213ENST00000638883 COL16A1Q07092 1604 aaPredicted RBP8.81□□□□□ -1
NECAP1-213ENST00000638883 KIF12Q96FN5 646 aa8.81□□□□□ -1
NECAP1-213ENST00000638883 MLLT3P42568 568 aaPredicted RBP8.81□□□□□ -1
NECAP1-213ENST00000638883 PDCL2Q8N4E4 241 aa8.81□□□□□ -1
NECAP1-213ENST00000638883 ST20-MTHFSA0A0A6YYL1 179 aa8.8□□□□□ -1
NECAP1-213ENST00000638883 PLEKHG3A1L390 1219 aa8.8□□□□□ -1
NECAP1-213ENST00000638883 HMGN5P82970 282 aaKnown RBP8.8□□□□□ -1
NECAP1-213ENST00000638883 NKTRP30414 1462 aaKnown RBP8.8□□□□□ -1
NECAP1-213ENST00000638883 ANKRD30AQ9BXX3 1397 aa8.8□□□□□ -1
NECAP1-213ENST00000638883 EP400Q96L91 3159 aa8.8□□□□□ -1
NECAP1-213ENST00000638883 TOGARAM1Q9Y4F4 1720 aa8.8□□□□□ -1
NECAP1-213ENST00000638883 MFAP1P55081 439 aaKnown RBP8.8□□□□□ -1
NECAP1-213ENST00000638883 TRERF1Q96PN7 1200 aa8.8□□□□□ -1
NECAP1-213ENST00000638883 FARP1Q9Y4F1 1045 aaPredicted RBP8.8□□□□□ -1
NECAP1-213ENST00000638883 PTPRUQ92729 1446 aa8.79□□□□□ -1
NECAP1-213ENST00000638883 ABCC6O95255 1503 aa8.79□□□□□ -1
NECAP1-213ENST00000638883 NCAPD2Q15021 1401 aa8.79□□□□□ -1
NECAP1-213ENST00000638883 PLEKHD1A6NEE1 506 aa8.79□□□□□ -1
NECAP1-213ENST00000638883 PSEN1P49768 467 aa8.79□□□□□ -1
NECAP1-213ENST00000638883 KIF3AQ9Y496 699 aa8.79□□□□□ -1
NECAP1-213ENST00000638883 MAPK8IP3Q9UPT6 1336 aa8.79□□□□□ -1
NECAP1-213ENST00000638883 TRIM6-TRIM34B2RNG4 842 aa8.78□□□□□ -1
NECAP1-213ENST00000638883 NBPF1Q3BBV0 1214 aa8.78□□□□□ -1
NECAP1-213ENST00000638883 C20orf194Q5TEA3 1177 aa8.78□□□□□ -1
NECAP1-213ENST00000638883 TIGD1Q96MW7 591 aa8.78□□□□□ -1
NECAP1-213ENST00000638883 TRIM34Q9BYJ4 488 aa8.78□□□□□ -1
NECAP1-213ENST00000638883 ZNF831Q5JPB2 1677 aa8.78□□□□□ -1
NECAP1-213ENST00000638883 CARD11Q9BXL7 1154 aa8.78□□□□□ -1
NECAP1-213ENST00000638883 CCDC39Q9UFE4 941 aa8.78□□□□□ -1
NECAP1-213ENST00000638883 FAM69CQ0P6D2 419 aa8.78□□□□□ -1
NECAP1-213ENST00000638883 ZNF467Q7Z7K2 595 aaPredicted RBP8.77□□□□□ -1
NECAP1-213ENST00000638883 GAS2L3Q86XJ1 694 aa8.77□□□□□ -1
NECAP1-213ENST00000638883 LTBP4Q8N2S1 1624 aa8.77□□□□□ -1.01
NECAP1-213ENST00000638883 ERICH4A6NGS2 130 aa8.77□□□□□ -1.01
NECAP1-213ENST00000638883 WWC1Q8IX03 1113 aa8.77□□□□□ -1.01
NECAP1-213ENST00000638883 TSC1Q92574 1164 aa8.77□□□□□ -1.01
NECAP1-213ENST00000638883 GPBP1L1Q9HC44 474 aaPredicted RBP8.77□□□□□ -1.01
NECAP1-213ENST00000638883 HDAC5Q9UQL6 1122 aa8.77□□□□□ -1.01
NECAP1-213ENST00000638883 EMILIN3Q9NT22 766 aa8.77□□□□□ -1.01
NECAP1-213ENST00000638883 NFAT5O94916 1531 aa8.77□□□□□ -1.01
NECAP1-213ENST00000638883 CHADLQ6NUI6 762 aa8.76□□□□□ -1.01
NECAP1-213ENST00000638883 HOMEZQ8IX15 550 aa8.76□□□□□ -1.01
NECAP1-213ENST00000638883 SEC24BO95487 1268 aa8.76□□□□□ -1.01
NECAP1-213ENST00000638883 WDR43Q15061 677 aaKnown RBP eCLIP8.76□□□□□ -1.01
NECAP1-213ENST00000638883 C14orf37Q86TY3 774 aa8.76□□□□□ -1.01
NECAP1-213ENST00000638883 DDX60Q8IY21 1712 aaKnown RBP8.76□□□□□ -1.01
NECAP1-213ENST00000638883 SCAF11Q99590 1463 aaKnown RBP8.76□□□□□ -1.01
NECAP1-213ENST00000638883 RGL3Q3MIN7 710 aa8.76□□□□□ -1.01
NECAP1-213ENST00000638883 NOL7Q9UMY1 257 aaKnown RBP8.76□□□□□ -1.01
NECAP1-213ENST00000638883 FAM177BA6PVY3 158 aa8.75□□□□□ -1.01
NECAP1-213ENST00000638883 ZKSCAN5Q9Y2L8 839 aa8.75□□□□□ -1.01
NECAP1-213ENST00000638883 ANTXR1Q9H6X2 564 aa8.75□□□□□ -1.01
NECAP1-213ENST00000638883 CLGNO14967 610 aa8.75□□□□□ -1.01
NECAP1-213ENST00000638883 TESK2Q96S53 571 aa8.75□□□□□ -1.01
NECAP1-213ENST00000638883 TRPC6Q9Y210 931 aa8.75□□□□□ -1.01
NECAP1-213ENST00000638883 SOX12O15370 315 aa8.74□□□□□ -1.01
NECAP1-213ENST00000638883 MPNDQ8N594 471 aa8.74□□□□□ -1.01
NECAP1-213ENST00000638883 ZBTB9Q96C00 473 aa8.74□□□□□ -1.01
NECAP1-213ENST00000638883 PPP1R9BQ96SB3 815 aa8.74□□□□□ -1.01
NECAP1-213ENST00000638883 MAP3K13O43283 966 aa8.74□□□□□ -1.01
NECAP1-213ENST00000638883 IRX5P78411 483 aaPredicted RBP8.74□□□□□ -1.01
NECAP1-213ENST00000638883 CAVIN1Q6NZI2 390 aaKnown RBP8.74□□□□□ -1.01
NECAP1-213ENST00000638883 C22orf23Q9BZE7 217 aa8.74□□□□□ -1.01
NECAP1-213ENST00000638883 CALCOCO1Q9P1Z2 691 aa8.74□□□□□ -1.01
NECAP1-213ENST00000638883 C5P01031 1676 aa8.74□□□□□ -1.01
NECAP1-213ENST00000638883 TSPY4P0CV99 314 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms