RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 RSPH6AQ9H0K4 717 aa25.92■■□□□ 1.74
HLA-A-209ENST00000638375 TNS2Q63HR2 1409 aa25.91■■□□□ 1.74
HLA-A-209ENST00000638375 CCER2I3L3R5 266 aa25.9■■□□□ 1.74
HLA-A-209ENST00000638375 DDB1Q16531 1140 aa25.9■■□□□ 1.74
HLA-A-209ENST00000638375 WDR43Q15061 677 aaKnown RBP eCLIP25.89■■□□□ 1.74
HLA-A-209ENST00000638375 PNISRQ8TF01 805 aaKnown RBP25.89■■□□□ 1.74
HLA-A-209ENST00000638375 PLEKHG2Q9H7P9 1386 aa25.88■■□□□ 1.73
HLA-A-209ENST00000638375 EXOC5O00471 708 aa25.88■■□□□ 1.73
HLA-A-209ENST00000638375 FCHSD2O94868 740 aa25.88■■□□□ 1.73
HLA-A-209ENST00000638375 PRKAR2BP31323 418 aa25.88■■□□□ 1.73
HLA-A-209ENST00000638375 ZCRB1Q8TBF4 217 aaKnown RBP25.87■■□□□ 1.73
HLA-A-209ENST00000638375 ADAMTS8Q9UP79 889 aa25.87■■□□□ 1.73
HLA-A-209ENST00000638375 PKD1L3Q7Z443 1732 aa25.87■■□□□ 1.73
HLA-A-209ENST00000638375 BRWD3Q6RI45 1802 aa25.86■■□□□ 1.73
HLA-A-209ENST00000638375 SHANK3Q9BYB0 1731 aa25.85■■□□□ 1.73
HLA-A-209ENST00000638375 PLEKHF1Q96S99 279 aa25.84■■□□□ 1.73
HLA-A-209ENST00000638375 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.84■■□□□ 1.73
HLA-A-209ENST00000638375 PDE3BQ13370 1112 aa25.83■■□□□ 1.73
HLA-A-209ENST00000638375 KRT27Q7Z3Y8 459 aa25.83■■□□□ 1.73
HLA-A-209ENST00000638375 MARCH10Q8NA82 808 aaPredicted RBP25.83■■□□□ 1.73
HLA-A-209ENST00000638375 PHACTR3Q96KR7 559 aa25.83■■□□□ 1.73
HLA-A-209ENST00000638375 AMOTQ4VCS5 1084 aa25.82■■□□□ 1.72
HLA-A-209ENST00000638375 PLEKHO1Q53GL0 409 aaPredicted RBP25.82■■□□□ 1.72
HLA-A-209ENST00000638375 SPG7Q9UQ90 795 aa25.82■■□□□ 1.72
HLA-A-209ENST00000638375 DDX54Q8TDD1 881 aaKnown RBP25.81■■□□□ 1.72
HLA-A-209ENST00000638375 PCDH11XQ9BZA7 1347 aa25.81■■□□□ 1.72
HLA-A-209ENST00000638375 PCDH11YQ9BZA8 1340 aa25.81■■□□□ 1.72
HLA-A-209ENST00000638375 CYP27B1O15528 508 aa25.8■■□□□ 1.72
HLA-A-209ENST00000638375 MTHFSDQ2M296 383 aaKnown RBP25.8■■□□□ 1.72
HLA-A-209ENST00000638375 FAM182BQ5T319 152 aa25.79■■□□□ 1.72
HLA-A-209ENST00000638375 ILDR2Q71H61 639 aa25.79■■□□□ 1.72
HLA-A-209ENST00000638375 CCDC146Q8IYE0 955 aa25.79■■□□□ 1.72
HLA-A-209ENST00000638375 ZNF530Q6P9A1 599 aaPredicted RBP25.78■■□□□ 1.72
HLA-A-209ENST00000638375 FAM9BQ8IZU0 186 aa25.77■■□□□ 1.72
HLA-A-209ENST00000638375 PNNQ9H307 717 aaKnown RBP25.77■■□□□ 1.72
HLA-A-209ENST00000638375 PHKG2P15735 406 aa25.76■■□□□ 1.71
HLA-A-209ENST00000638375 IFNL2Q8IZJ0 200 aa25.75■■□□□ 1.71
HLA-A-209ENST00000638375 RUNDC1Q96C34 613 aa25.75■■□□□ 1.71
HLA-A-209ENST00000638375 MAPK8IP3Q9UPT6 1336 aa25.74■■□□□ 1.71
HLA-A-209ENST00000638375 GAS2L2Q8NHY3 880 aa25.74■■□□□ 1.71
HLA-A-209ENST00000638375 NEFMP07197 916 aa25.72■■□□□ 1.71
HLA-A-209ENST00000638375 BCL9O00512 1426 aa25.71■■□□□ 1.71
HLA-A-209ENST00000638375 NKX1-1Q15270 411 aaPredicted RBP25.71■■□□□ 1.71
HLA-A-209ENST00000638375 AKAP4Q5JQC9 854 aa25.71■■□□□ 1.71
HLA-A-209ENST00000638375 C1orf141Q5JVX7 400 aa25.71■■□□□ 1.71
HLA-A-209ENST00000638375 NFE2L2Q16236 605 aa25.69■■□□□ 1.7
HLA-A-209ENST00000638375 FAM196AQ6ZSG2 479 aa25.69■■□□□ 1.7
HLA-A-209ENST00000638375 KDM6AO15550 1401 aaPredicted RBP25.69■■□□□ 1.7
HLA-A-209ENST00000638375 MAP3K5Q99683 1374 aa25.68■■□□□ 1.7
HLA-A-209ENST00000638375 TOGARAM1Q9Y4F4 1720 aa25.66■■□□□ 1.7
HLA-A-209ENST00000638375 HSP90AB1P08238 724 aaKnown RBP25.66■■□□□ 1.7
HLA-A-209ENST00000638375 TMPOP42166 694 aaKnown RBP25.66■■□□□ 1.7
HLA-A-209ENST00000638375 MPRIPQ6WCQ1 1025 aa25.66■■□□□ 1.7
HLA-A-209ENST00000638375 RRP7AQ9Y3A4 280 aaKnown RBP25.66■■□□□ 1.7
HLA-A-209ENST00000638375 GNAT3A8MTJ3 354 aa25.65■■□□□ 1.7
HLA-A-209ENST00000638375 APAF1O14727 1248 aa25.65■■□□□ 1.7
HLA-A-209ENST00000638375 ACSBG1Q96GR2 724 aa25.65■■□□□ 1.7
HLA-A-209ENST00000638375 DCAF5Q96JK2 942 aa25.65■■□□□ 1.7
HLA-A-209ENST00000638375 DOT1LQ8TEK3 1739 aa25.64■■□□□ 1.7
HLA-A-209ENST00000638375 LGR6Q9HBX8 967 aa25.63■■□□□ 1.69
HLA-A-209ENST00000638375 ADAMTS7Q9UKP4 1686 aa25.63■■□□□ 1.69
HLA-A-209ENST00000638375 RNMTO43148 476 aaKnown RBP25.62■■□□□ 1.69
HLA-A-209ENST00000638375 RIPK4P57078 832 aa25.62■■□□□ 1.69
HLA-A-209ENST00000638375 DLG5Q8TDM6 1919 aa25.62■■□□□ 1.69
HLA-A-209ENST00000638375 SBF2Q86WG5 1849 aa25.62■■□□□ 1.69
HLA-A-209ENST00000638375 SENP3-EIF4A1A0A087X0R7 540 aa25.61■■□□□ 1.69
HLA-A-209ENST00000638375 KCNQ2O43526 872 aa25.61■■□□□ 1.69
HLA-A-209ENST00000638375 NEUROD2Q15784 382 aa25.61■■□□□ 1.69
HLA-A-209ENST00000638375 PTF1AQ7RTS3 328 aa25.61■■□□□ 1.69
HLA-A-209ENST00000638375 IL17REQ8NFR9 667 aa25.61■■□□□ 1.69
HLA-A-209ENST00000638375 NHSQ6T4R5 1651 aa25.61■■□□□ 1.69
HLA-A-209ENST00000638375 SCN11AQ9UI33 1791 aa25.6■■□□□ 1.69
HLA-A-209ENST00000638375 PRIM1P49642 420 aaKnown RBP25.6■■□□□ 1.69
HLA-A-209ENST00000638375 HTATSF1O43719 755 aaKnown RBP25.59■■□□□ 1.69
HLA-A-209ENST00000638375 TRIM37O94972 964 aa25.59■■□□□ 1.69
HLA-A-209ENST00000638375 DCTN1Q14203 1278 aa25.59■■□□□ 1.69
HLA-A-209ENST00000638375 EP400Q96L91 3159 aa25.59■■□□□ 1.69
HLA-A-209ENST00000638375 CEMIPQ8WUJ3 1361 aa25.58■■□□□ 1.69
HLA-A-209ENST00000638375 ERVV-2B6SEH9 535 aa25.58■■□□□ 1.69
HLA-A-209ENST00000638375 MCM10Q7L590 875 aa25.58■■□□□ 1.69
HLA-A-209ENST00000638375 RTF1Q92541 710 aaKnown RBP25.58■■□□□ 1.69
HLA-A-209ENST00000638375 TRIM35Q9UPQ4 493 aa25.58■■□□□ 1.69
HLA-A-209ENST00000638375 SYTL4Q96C24 671 aaPredicted RBP25.57■■□□□ 1.68
HLA-A-209ENST00000638375 MRC1P22897 1456 aa25.57■■□□□ 1.68
HLA-A-209ENST00000638375 BCL11BQ9C0K0 894 aaPredicted RBP25.56■■□□□ 1.68
HLA-A-209ENST00000638375 VIRMAQ69YN4 1812 aaKnown RBP25.56■■□□□ 1.68
HLA-A-209ENST00000638375 THUMPD2Q9BTF0 503 aaKnown RBP25.55■■□□□ 1.68
HLA-A-209ENST00000638375 ITGB4P16144 1822 aa25.55■■□□□ 1.68
HLA-A-209ENST00000638375 CABP4P57796 275 aa25.54■■□□□ 1.68
HLA-A-209ENST00000638375 LMOD3Q0VAK6 560 aa25.54■■□□□ 1.68
HLA-A-209ENST00000638375 PIGBQ92521 554 aa25.54■■□□□ 1.68
HLA-A-209ENST00000638375 SLC52A2Q9HAB3 445 aa25.54■■□□□ 1.68
HLA-A-209ENST00000638375 TMOD3Q9NYL9 352 aa25.53■■□□□ 1.68
HLA-A-209ENST00000638375 TNS1Q9HBL0 1735 aaKnown RBP25.53■■□□□ 1.68
HLA-A-209ENST00000638375 NFATC2IPQ8NCF5 419 aa25.52■■□□□ 1.68
HLA-A-209ENST00000638375 KAT6BQ8WYB5 2073 aa25.52■■□□□ 1.68
HLA-A-209ENST00000638375 UPF1Q92900 1129 aaKnown RBP eCLIP25.51■■□□□ 1.67
HLA-A-209ENST00000638375 BTAF1O14981 1849 aa25.5■■□□□ 1.67
HLA-A-209ENST00000638375 TEFQ10587 303 aa25.5■■□□□ 1.67
HLA-A-209ENST00000638375 NCBP3Q53F19 620 aaKnown RBP25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms