RNA–Protein interactions for RNA: ENST00000636901.1

CACNB4-238, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5 BASIC

Gene CACNB4, Length 7,706 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-238	ENST00000636901	SOCS7	O14512	581 aa		3.31	□□□□□ -1.88
CACNB4-238	ENST00000636901	SYCP1	Q15431	976 aa		3.31	□□□□□ -1.88
CACNB4-238	ENST00000636901	DPY19L2	Q6NUT2	758 aa		3.31	□□□□□ -1.88
CACNB4-238	ENST00000636901	SRCIN1	Q9C0H9	1055 aa		3.31	□□□□□ -1.88
CACNB4-238	ENST00000636901	ABCC10	Q5T3U5	1492 aa		3.31	□□□□□ -1.88
CACNB4-238	ENST00000636901	OFD1	O75665	1012 aa		3.3	□□□□□ -1.88
CACNB4-238	ENST00000636901	IPO7	O95373	1038 aa	Known RBP	3.3	□□□□□ -1.88
CACNB4-238	ENST00000636901	MS4A1	P11836	297 aa		3.3	□□□□□ -1.88
CACNB4-238	ENST00000636901	PDE6B	P35913	854 aa		3.3	□□□□□ -1.88
CACNB4-238	ENST00000636901	MNS1	Q8NEH6	495 aa		3.3	□□□□□ -1.88
CACNB4-238	ENST00000636901	TRAPPC8	Q9Y2L5	1435 aa		3.3	□□□□□ -1.88
CACNB4-238	ENST00000636901	ATP10A	O60312	1499 aa		3.3	□□□□□ -1.88
CACNB4-238	ENST00000636901	OPA1	O60313	960 aa		3.3	□□□□□ -1.88
CACNB4-238	ENST00000636901	LETM1	O95202	739 aa	Predicted RBP	3.3	□□□□□ -1.88
CACNB4-238	ENST00000636901	ANKRD18A	Q8IVF6	992 aa		3.3	□□□□□ -1.88
CACNB4-238	ENST00000636901	ZNF592	Q92610	1267 aa		3.3	□□□□□ -1.88
CACNB4-238	ENST00000636901	MYH14	Q7Z406	1995 aa	Known RBP	3.3	□□□□□ -1.88
CACNB4-238	ENST00000636901		E9PSI1	815 aa		3.3	□□□□□ -1.88
CACNB4-238	ENST00000636901	ZNF354C	Q86Y25	554 aa		3.3	□□□□□ -1.88
CACNB4-238	ENST00000636901	ARHGAP35	Q9NRY4	1499 aa		3.3	□□□□□ -1.88
CACNB4-238	ENST00000636901	DOPEY1	Q5JWR5	2465 aa		3.3	□□□□□ -1.88
CACNB4-238	ENST00000636901	AATK	Q6ZMQ8	1374 aa		3.3	□□□□□ -1.88
CACNB4-238	ENST00000636901	MCC	P23508	829 aa		3.3	□□□□□ -1.88
CACNB4-238	ENST00000636901	ARL1	P40616	181 aa	Predicted RBP	3.3	□□□□□ -1.88
CACNB4-238	ENST00000636901	CCDC39	Q9UFE4	941 aa		3.3	□□□□□ -1.88
CACNB4-238	ENST00000636901	EVC2	Q86UK5	1308 aa		3.3	□□□□□ -1.88
CACNB4-238	ENST00000636901	KCNA6	P17658	529 aa		3.3	□□□□□ -1.88
CACNB4-238	ENST00000636901	LRRFIP1	Q32MZ4	808 aa	Known RBP	3.3	□□□□□ -1.88
CACNB4-238	ENST00000636901	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	3.3	□□□□□ -1.88
CACNB4-238	ENST00000636901	ZCRB1	Q8TBF4	217 aa	Known RBP	3.3	□□□□□ -1.88
CACNB4-238	ENST00000636901	MTMR7	Q9Y216	660 aa		3.3	□□□□□ -1.88
CACNB4-238	ENST00000636901	UHRF1BP1L	A0JNW5	1464 aa		3.3	□□□□□ -1.88
CACNB4-238	ENST00000636901	BRD4	O60885	1362 aa	Predicted RBP	3.3	□□□□□ -1.88
CACNB4-238	ENST00000636901	TPM1	P09493	284 aa		3.3	□□□□□ -1.88
CACNB4-238	ENST00000636901	SLFN14	P0C7P3	912 aa		3.3	□□□□□ -1.88
CACNB4-238	ENST00000636901	SF3A1	Q15459	793 aa	Known RBP	3.3	□□□□□ -1.88
CACNB4-238	ENST00000636901	ARHGEF10	O15013	1369 aa		3.3	□□□□□ -1.88
CACNB4-238	ENST00000636901	JCAD	Q9P266	1359 aa		3.3	□□□□□ -1.88
CACNB4-238	ENST00000636901	TRO	Q12816	1431 aa	Predicted RBP	3.29	□□□□□ -1.88
CACNB4-238	ENST00000636901	PYGB	P11216	843 aa		3.29	□□□□□ -1.88
CACNB4-238	ENST00000636901	TMF1	P82094	1093 aa		3.29	□□□□□ -1.88
CACNB4-238	ENST00000636901	NUCB1	Q02818	461 aa		3.29	□□□□□ -1.88
CACNB4-238	ENST00000636901	OTUD7B	Q6GQQ9	843 aa		3.29	□□□□□ -1.88
CACNB4-238	ENST00000636901	FAM196A	Q6ZSG2	479 aa		3.29	□□□□□ -1.88
CACNB4-238	ENST00000636901	PPM1E	Q8WY54	764 aa		3.29	□□□□□ -1.88
CACNB4-238	ENST00000636901	SLK	Q9H2G2	1235 aa	Predicted RBP	3.29	□□□□□ -1.88
CACNB4-238	ENST00000636901	SPON1	Q9HCB6	807 aa		3.29	□□□□□ -1.88
CACNB4-238	ENST00000636901	SEC24B	O95487	1268 aa		3.29	□□□□□ -1.88
CACNB4-238	ENST00000636901	TAT	P17735	454 aa	Predicted RBP	3.29	□□□□□ -1.88
CACNB4-238	ENST00000636901	CLASRP	Q8N2M8	674 aa	Known RBP	3.29	□□□□□ -1.88
CACNB4-238	ENST00000636901	TMOD2	Q9NZR1	351 aa		3.29	□□□□□ -1.88
CACNB4-238	ENST00000636901	KNSTRN	Q9Y448	316 aa		3.29	□□□□□ -1.88
CACNB4-238	ENST00000636901	PIEZO1	Q92508	2521 aa		3.29	□□□□□ -1.88
CACNB4-238	ENST00000636901	RRBP1	Q9P2E9	1410 aa	Known RBP	3.29	□□□□□ -1.88
CACNB4-238	ENST00000636901	GOLGA6L9	A6NEM1	432 aa		3.29	□□□□□ -1.88
CACNB4-238	ENST00000636901	PRPF40A	O75400	957 aa	Known RBP	3.29	□□□□□ -1.88
CACNB4-238	ENST00000636901	ESCO1	Q5FWF5	840 aa		3.29	□□□□□ -1.88
CACNB4-238	ENST00000636901	CCDC47	Q96A33	483 aa	Known RBP	3.29	□□□□□ -1.88
CACNB4-238	ENST00000636901	SPG7	Q9UQ90	795 aa		3.29	□□□□□ -1.88
CACNB4-238	ENST00000636901	EXOC5	O00471	708 aa		3.29	□□□□□ -1.88
CACNB4-238	ENST00000636901	SEMA3F	Q13275	785 aa		3.29	□□□□□ -1.88
CACNB4-238	ENST00000636901	ACBD5	Q5T8D3	534 aa	Predicted RBP	3.29	□□□□□ -1.88
CACNB4-238	ENST00000636901	TEX13A	Q9BXU3	409 aa	Predicted RBP	3.29	□□□□□ -1.88
CACNB4-238	ENST00000636901	IQGAP2	Q13576	1575 aa		3.29	□□□□□ -1.88
CACNB4-238	ENST00000636901	GPATCH3	Q96I76	525 aa		3.28	□□□□□ -1.88
CACNB4-238	ENST00000636901	ERCC6L2	Q5T890	1561 aa		3.28	□□□□□ -1.88
CACNB4-238	ENST00000636901	CCER2	I3L3R5	266 aa		3.28	□□□□□ -1.88
CACNB4-238	ENST00000636901	SYNE3	Q6ZMZ3	975 aa		3.28	□□□□□ -1.88
CACNB4-238	ENST00000636901	TTC28	Q96AY4	2481 aa		3.28	□□□□□ -1.88
CACNB4-238	ENST00000636901	RAD54L2	Q9Y4B4	1467 aa		3.28	□□□□□ -1.88
CACNB4-238	ENST00000636901	PLCE1	Q9P212	2302 aa		3.28	□□□□□ -1.88
CACNB4-238	ENST00000636901	CUX1	P39880	1505 aa		3.28	□□□□□ -1.88
CACNB4-238	ENST00000636901	NUP155	O75694	1391 aa		3.28	□□□□□ -1.88
CACNB4-238	ENST00000636901	XRCC6	P12956	609 aa	Known RBP eCLIP	3.28	□□□□□ -1.88
CACNB4-238	ENST00000636901	CCDC146	Q8IYE0	955 aa		3.28	□□□□□ -1.88
CACNB4-238	ENST00000636901	COG3	Q96JB2	828 aa		3.28	□□□□□ -1.88
CACNB4-238	ENST00000636901	CNOT7	Q9UIV1	285 aa	Known RBP	3.28	□□□□□ -1.88
CACNB4-238	ENST00000636901	USP48	Q86UV5	1035 aa		3.28	□□□□□ -1.88
CACNB4-238	ENST00000636901	BANK1	Q8NDB2	785 aa		3.28	□□□□□ -1.88
CACNB4-238	ENST00000636901	SPC25	Q9HBM1	224 aa		3.28	□□□□□ -1.88
CACNB4-238	ENST00000636901	CHIC2	Q9UKJ5	165 aa		3.28	□□□□□ -1.88
CACNB4-238	ENST00000636901	KIF26B	Q2KJY2	2108 aa		3.28	□□□□□ -1.88
CACNB4-238	ENST00000636901	NACA	E9PAV3	2078 aa		3.28	□□□□□ -1.88
CACNB4-238	ENST00000636901	TOM1L2	Q6ZVM7	507 aa		3.28	□□□□□ -1.88
CACNB4-238	ENST00000636901	MORC4	Q8TE76	937 aa		3.28	□□□□□ -1.88
CACNB4-238	ENST00000636901	SFMBT1	Q9UHJ3	866 aa		3.28	□□□□□ -1.88
CACNB4-238	ENST00000636901	SCN3A	Q9NY46	2000 aa		3.28	□□□□□ -1.88
CACNB4-238	ENST00000636901	LPXN	O60711	386 aa		3.28	□□□□□ -1.88
CACNB4-238	ENST00000636901	HMGB1	P09429	215 aa	Known RBP	3.28	□□□□□ -1.88
CACNB4-238	ENST00000636901	MKRN3	Q13064	507 aa	Known RBP	3.28	□□□□□ -1.88
CACNB4-238	ENST00000636901	KMT5B	Q4FZB7	885 aa		3.28	□□□□□ -1.88
CACNB4-238	ENST00000636901	ANKRD45	Q5TZF3	282 aa		3.28	□□□□□ -1.88
CACNB4-238	ENST00000636901	FAM200A	Q8TCP9	573 aa		3.28	□□□□□ -1.88
CACNB4-238	ENST00000636901	GTF3C6	Q969F1	213 aa		3.28	□□□□□ -1.88
CACNB4-238	ENST00000636901	U2SURP	O15042	1029 aa	Known RBP	3.27	□□□□□ -1.89
CACNB4-238	ENST00000636901	FYB1	O15117	783 aa		3.27	□□□□□ -1.89
CACNB4-238	ENST00000636901	MAP4K4	O95819	1239 aa	Predicted RBP	3.27	□□□□□ -1.89
CACNB4-238	ENST00000636901	KIF22	Q14807	665 aa		3.27	□□□□□ -1.89
CACNB4-238	ENST00000636901	SEPT8	Q92599	483 aa		3.27	□□□□□ -1.89
CACNB4-238	ENST00000636901	ITM2B	Q9Y287	266 aa		3.27	□□□□□ -1.89

Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms