RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 RTL5Q5HYW3 569 aaPredicted RBP8.86□□□□□ -0.99
CLN5-212ENST00000636602 ZBTB33Q86T24 672 aa8.86□□□□□ -0.99
CLN5-212ENST00000636602 KDF1Q8NAX2 398 aaPredicted RBP8.86□□□□□ -0.99
CLN5-212ENST00000636602 ADD1P35611 737 aaKnown RBP8.85□□□□□ -0.99
CLN5-212ENST00000636602 MYSM1Q5VVJ2 828 aa8.85□□□□□ -0.99
CLN5-212ENST00000636602 PRICKLE2Q7Z3G6 844 aa8.85□□□□□ -0.99
CLN5-212ENST00000636602 ZNF784Q8NCA9 323 aaPredicted RBP8.85□□□□□ -0.99
CLN5-212ENST00000636602 TIMELESSQ9UNS1 1208 aa8.85□□□□□ -0.99
CLN5-212ENST00000636602 ZMYND10O75800 440 aa8.84□□□□□ -0.99
CLN5-212ENST00000636602 RHOQP17081 205 aa8.84□□□□□ -0.99
CLN5-212ENST00000636602 LILRA1O75019 489 aa8.83□□□□□ -1
CLN5-212ENST00000636602 FKBPLQ9UIM3 349 aa8.83□□□□□ -1
CLN5-212ENST00000636602 OIP5O43482 229 aa8.82□□□□□ -1
CLN5-212ENST00000636602 RNF144AP50876 292 aaPredicted RBP8.82□□□□□ -1
CLN5-212ENST00000636602 BRPF1P55201 1214 aaPredicted RBP8.82□□□□□ -1
CLN5-212ENST00000636602 SNRPNP63162 240 aaKnown RBP8.82□□□□□ -1
CLN5-212ENST00000636602 RIPOR1Q6ZS17 1223 aa8.82□□□□□ -1
CLN5-212ENST00000636602 GTPBP3Q969Y2 492 aaKnown RBP8.82□□□□□ -1
CLN5-212ENST00000636602 ALYREFQ86V81 257 aaKnown RBP8.81□□□□□ -1
CLN5-212ENST00000636602 OCSTAMPQ9BR26 566 aa8.81□□□□□ -1
CLN5-212ENST00000636602 H7C1W4 665 aa8.8□□□□□ -1
CLN5-212ENST00000636602 TRERF1Q96PN7 1200 aa8.8□□□□□ -1
CLN5-212ENST00000636602 SLC24A3Q9HC58 644 aa8.8□□□□□ -1
CLN5-212ENST00000636602 MX2P20592 715 aa8.79□□□□□ -1
CLN5-212ENST00000636602 CTDSPL2Q05D32 466 aa8.79□□□□□ -1
CLN5-212ENST00000636602 NBPF20Q3BBV1 942 aa8.79□□□□□ -1
CLN5-212ENST00000636602 KRTAP1-3Q8IUG1 177 aa8.79□□□□□ -1
CLN5-212ENST00000636602 NSFL1CQ9UNZ2 370 aaKnown RBP8.79□□□□□ -1
CLN5-212ENST00000636602 ZC3H4Q9UPT8 1303 aaKnown RBP8.79□□□□□ -1
CLN5-212ENST00000636602 ERVH48-1M5A8F1 160 aa8.78□□□□□ -1
CLN5-212ENST00000636602 COL8A1P27658 744 aa8.78□□□□□ -1
CLN5-212ENST00000636602 RAB15P59190 212 aa8.78□□□□□ -1
CLN5-212ENST00000636602 PTK2Q05397 1052 aa8.78□□□□□ -1
CLN5-212ENST00000636602 NEUROD2Q15784 382 aa8.78□□□□□ -1
CLN5-212ENST00000636602 ADAM32Q8TC27 787 aa8.78□□□□□ -1
CLN5-212ENST00000636602 MKL2Q9ULH7 1088 aa8.78□□□□□ -1
CLN5-212ENST00000636602 DYRK1BQ9Y463 629 aa8.78□□□□□ -1
CLN5-212ENST00000636602 ERICH6Q7L0X2 663 aa8.77□□□□□ -1.01
CLN5-212ENST00000636602 TRIM66O15016 1216 aa8.76□□□□□ -1.01
CLN5-212ENST00000636602 OXCT2Q9BYC2 517 aaPredicted RBP8.76□□□□□ -1.01
CLN5-212ENST00000636602 GPSM3Q9Y4H4 160 aa8.76□□□□□ -1.01
CLN5-212ENST00000636602 LRRN4Q8WUT4 740 aa8.75□□□□□ -1.01
CLN5-212ENST00000636602 GAS2L1Q99501 681 aaPredicted RBP8.75□□□□□ -1.01
CLN5-212ENST00000636602 SHISA8B8ZZ34 492 aa8.74□□□□□ -1.01
CLN5-212ENST00000636602 GPC1P35052 558 aa8.74□□□□□ -1.01
CLN5-212ENST00000636602 CLK2P49760 499 aaKnown RBP8.74□□□□□ -1.01
CLN5-212ENST00000636602 MAP2K3P46734 347 aa8.73□□□□□ -1.01
CLN5-212ENST00000636602 NR6A1Q15406 480 aa8.73□□□□□ -1.01
CLN5-212ENST00000636602 ESPNB1AK53 854 aa8.72□□□□□ -1.01
CLN5-212ENST00000636602 C1orf229Q6ZS94 237 aaPredicted RBP8.72□□□□□ -1.01
CLN5-212ENST00000636602 CYLDQ9NQC7 956 aa8.72□□□□□ -1.01
CLN5-212ENST00000636602 ATP5J2-PTCD1G3V325 749 aa8.71□□□□□ -1.02
CLN5-212ENST00000636602 ITGB7P26010 798 aa8.71□□□□□ -1.02
CLN5-212ENST00000636602 POU4F2Q12837 409 aa8.71□□□□□ -1.02
CLN5-212ENST00000636602 RRAGCQ9HB90 399 aa8.71□□□□□ -1.02
CLN5-212ENST00000636602 C1QTNF9BB2RNN3 333 aa8.7□□□□□ -1.02
CLN5-212ENST00000636602 MEN1O00255 615 aa8.7□□□□□ -1.02
CLN5-212ENST00000636602 DZIP3Q86Y13 1208 aaKnown RBP8.7□□□□□ -1.02
CLN5-212ENST00000636602 NUCKS1Q9H1E3 243 aaKnown RBP8.7□□□□□ -1.02
CLN5-212ENST00000636602 GRIN2CQ14957 1233 aa8.69□□□□□ -1.02
CLN5-212ENST00000636602 PPP2R2DQ66LE6 453 aa8.69□□□□□ -1.02
CLN5-212ENST00000636602 C14orf37Q86TY3 774 aa8.69□□□□□ -1.02
CLN5-212ENST00000636602 EDARADDQ8WWZ3 215 aa8.69□□□□□ -1.02
CLN5-212ENST00000636602 KLRG1Q96E93 195 aa8.69□□□□□ -1.02
CLN5-212ENST00000636602 CFHR5Q9BXR6 569 aa8.69□□□□□ -1.02
CLN5-212ENST00000636602 NBPF10Q6P3W6 841 aaKnown RBP8.68□□□□□ -1.02
CLN5-212ENST00000636602 LINC00114Q6XXX2 140 aa8.68□□□□□ -1.02
CLN5-212ENST00000636602 NBPF15Q8N660 670 aa8.68□□□□□ -1.02
CLN5-212ENST00000636602 TRIM52Q96A61 297 aa8.68□□□□□ -1.02
CLN5-212ENST00000636602 SUV39H2Q9H5I1 410 aa8.68□□□□□ -1.02
CLN5-212ENST00000636602 A0A1W2PRU2 124 aa8.67□□□□□ -1.02
CLN5-212ENST00000636602 SLC27A3Q5K4L6 730 aa8.67□□□□□ -1.02
CLN5-212ENST00000636602 LCE3BQ5TA77 95 aa8.67□□□□□ -1.02
CLN5-212ENST00000636602 CD163Q86VB7 1156 aa8.67□□□□□ -1.02
CLN5-212ENST00000636602 SEPT12Q8IYM1 358 aa8.67□□□□□ -1.02
CLN5-212ENST00000636602 AK7Q96M32 723 aa8.67□□□□□ -1.02
CLN5-212ENST00000636602 POLR3EQ9NVU0 708 aa8.67□□□□□ -1.02
CLN5-212ENST00000636602 GDF2Q9UK05 429 aaPredicted RBP8.67□□□□□ -1.02
CLN5-212ENST00000636602 F11P03951 625 aa8.66□□□□□ -1.02
CLN5-212ENST00000636602 HOXB4P17483 251 aaPredicted RBP8.66□□□□□ -1.02
CLN5-212ENST00000636602 GRIP2Q9C0E4 1043 aa8.66□□□□□ -1.02
CLN5-212ENST00000636602 WDR44Q5JSH3 913 aa8.65□□□□□ -1.02
CLN5-212ENST00000636602 KRTAP4-12Q9BQ66 201 aa8.65□□□□□ -1.02
CLN5-212ENST00000636602 SEMA6BQ9H3T3 888 aa8.65□□□□□ -1.02
CLN5-212ENST00000636602 TIMMDC1Q9NPL8 285 aa8.65□□□□□ -1.02
CLN5-212ENST00000636602 SPATA31C2B4DYI2 1134 aa8.64□□□□□ -1.03
CLN5-212ENST00000636602 THBS1P07996 1170 aa8.64□□□□□ -1.03
CLN5-212ENST00000636602 ZMYM1Q5SVZ6 1142 aa8.64□□□□□ -1.03
CLN5-212ENST00000636602 RSPH6AQ9H0K4 717 aa8.64□□□□□ -1.03
CLN5-212ENST00000636602 CHRNA4P43681 627 aa8.63□□□□□ -1.03
CLN5-212ENST00000636602 GOLGA6L1Q8N7Z2 621 aa8.63□□□□□ -1.03
CLN5-212ENST00000636602 NLRP3Q96P20 1036 aa8.63□□□□□ -1.03
CLN5-212ENST00000636602 PIK3R2O00459 728 aa8.62□□□□□ -1.03
CLN5-212ENST00000636602 GNB5O14775 395 aa8.62□□□□□ -1.03
CLN5-212ENST00000636602 AMPD1P23109 780 aa8.62□□□□□ -1.03
CLN5-212ENST00000636602 PDE4DQ08499 809 aa8.62□□□□□ -1.03
CLN5-212ENST00000636602 PHF24Q9UPV7 400 aa8.62□□□□□ -1.03
CLN5-212ENST00000636602 WASLO00401 505 aaPredicted RBP8.61□□□□□ -1.03
CLN5-212ENST00000636602 DOC2BQ14184 412 aa8.61□□□□□ -1.03
CLN5-212ENST00000636602 PNMA1Q8ND90 353 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms