RNA–Protein interactions for RNA: ENST00000636367.1

SMARCA2-250, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 1,889 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-250ENST00000636367 NAA30Q147X3 362 aaPredicted RBP10.72□□□□□ -0.69
SMARCA2-250ENST00000636367 KCNK17Q96T54 332 aa10.71□□□□□ -0.69
SMARCA2-250ENST00000636367 ACBD3Q9H3P7 528 aa10.71□□□□□ -0.69
SMARCA2-250ENST00000636367 THOC2Q8NI27 1593 aaKnown RBP10.71□□□□□ -0.7
SMARCA2-250ENST00000636367 HOXB3P14651 431 aaPredicted RBP10.7□□□□□ -0.7
SMARCA2-250ENST00000636367 CTHP32929 405 aa10.7□□□□□ -0.7
SMARCA2-250ENST00000636367 SF3B2Q13435 895 aaKnown RBP10.7□□□□□ -0.7
SMARCA2-250ENST00000636367 BLOC1S3Q6QNY0 202 aa10.7□□□□□ -0.7
SMARCA2-250ENST00000636367 NOP9Q86U38 636 aaKnown RBP10.7□□□□□ -0.7
SMARCA2-250ENST00000636367 PIF1Q9H611 641 aa10.7□□□□□ -0.7
SMARCA2-250ENST00000636367 DOLKQ9UPQ8 538 aa10.7□□□□□ -0.7
SMARCA2-250ENST00000636367 ARID4BQ4LE39 1312 aaPredicted RBP10.7□□□□□ -0.7
SMARCA2-250ENST00000636367 FANCCQ00597 558 aa10.7□□□□□ -0.7
SMARCA2-250ENST00000636367 PARP2Q9UGN5 583 aa10.7□□□□□ -0.7
SMARCA2-250ENST00000636367 TMA7Q9Y2S6 64 aaKnown RBP10.7□□□□□ -0.7
SMARCA2-250ENST00000636367 CLCN6P51797 869 aa10.69□□□□□ -0.7
SMARCA2-250ENST00000636367 PSME1Q06323 249 aa10.69□□□□□ -0.7
SMARCA2-250ENST00000636367 PMFBP1Q8TBY8 1022 aa10.69□□□□□ -0.7
SMARCA2-250ENST00000636367 SLC39A7Q92504 469 aa10.69□□□□□ -0.7
SMARCA2-250ENST00000636367 METRNQ9UJH8 293 aa10.69□□□□□ -0.7
SMARCA2-250ENST00000636367 SBNO2Q9Y2G9 1366 aa10.69□□□□□ -0.7
SMARCA2-250ENST00000636367 MARCH6O60337 910 aa10.68□□□□□ -0.7
SMARCA2-250ENST00000636367 XPCQ01831 940 aaPredicted RBP10.68□□□□□ -0.7
SMARCA2-250ENST00000636367 CCSER2Q9H7U1 834 aa10.68□□□□□ -0.7
SMARCA2-250ENST00000636367 RBM19Q9Y4C8 960 aaKnown RBP10.68□□□□□ -0.7
SMARCA2-250ENST00000636367 MRC2Q9UBG0 1479 aa10.68□□□□□ -0.7
SMARCA2-250ENST00000636367 ATP2B1P20020 1258 aa10.68□□□□□ -0.7
SMARCA2-250ENST00000636367 MAPK8P45983 427 aa10.68□□□□□ -0.7
SMARCA2-250ENST00000636367 SAMD7Q7Z3H4 446 aa10.68□□□□□ -0.7
SMARCA2-250ENST00000636367 GPATCH3Q96I76 525 aa10.68□□□□□ -0.7
SMARCA2-250ENST00000636367 DUSP9Q99956 384 aaKnown RBP10.68□□□□□ -0.7
SMARCA2-250ENST00000636367 CUEDC1Q9NWM3 386 aaPredicted RBP10.68□□□□□ -0.7
SMARCA2-250ENST00000636367 PTK2Q05397 1052 aa10.67□□□□□ -0.7
SMARCA2-250ENST00000636367 FMR1Q06787 632 aaKnown RBP eCLIP10.67□□□□□ -0.7
SMARCA2-250ENST00000636367 TSEN2Q8NCE0 465 aaKnown RBP10.67□□□□□ -0.7
SMARCA2-250ENST00000636367 ADAM32Q8TC27 787 aa10.67□□□□□ -0.7
SMARCA2-250ENST00000636367 SETDB2Q96T68 719 aa10.67□□□□□ -0.7
SMARCA2-250ENST00000636367 TLDC2A0PJX2 215 aa10.66□□□□□ -0.7
SMARCA2-250ENST00000636367 TREHO43280 583 aa10.66□□□□□ -0.7
SMARCA2-250ENST00000636367 DNAJA1P31689 397 aaKnown RBP10.66□□□□□ -0.7
SMARCA2-250ENST00000636367 TGIF2Q9GZN2 237 aa10.66□□□□□ -0.7
SMARCA2-250ENST00000636367 MRS2Q9HD23 443 aa10.66□□□□□ -0.7
SMARCA2-250ENST00000636367 LDHBP07195 334 aaKnown RBP10.66□□□□□ -0.7
SMARCA2-250ENST00000636367 NOL8Q76FK4 1167 aaKnown RBP10.66□□□□□ -0.7
SMARCA2-250ENST00000636367 CERS3Q8IU89 383 aa10.66□□□□□ -0.7
SMARCA2-250ENST00000636367 RBCK1Q9BYM8 510 aa10.66□□□□□ -0.7
SMARCA2-250ENST00000636367 WWC3Q9ULE0 1092 aa10.66□□□□□ -0.7
SMARCA2-250ENST00000636367 URB2Q14146 1524 aaKnown RBP10.65□□□□□ -0.7
SMARCA2-250ENST00000636367 WEE1P30291 646 aa10.65□□□□□ -0.7
SMARCA2-250ENST00000636367 Q3C1V9 767 aa10.65□□□□□ -0.7
SMARCA2-250ENST00000636367 RNF34Q969K3 372 aa10.65□□□□□ -0.7
SMARCA2-250ENST00000636367 DOK7Q18PE1 504 aa10.64□□□□□ -0.71
SMARCA2-250ENST00000636367 HELQQ8TDG4 1101 aa10.64□□□□□ -0.71
SMARCA2-250ENST00000636367 MICAL1Q8TDZ2 1067 aa10.64□□□□□ -0.71
SMARCA2-250ENST00000636367 USB1Q9BQ65 265 aaKnown RBP10.64□□□□□ -0.71
SMARCA2-250ENST00000636367 ZBED2Q9BTP6 218 aa10.64□□□□□ -0.71
SMARCA2-250ENST00000636367 VTI1BQ9UEU0 232 aa10.64□□□□□ -0.71
SMARCA2-250ENST00000636367 PCDHGA11Q9Y5H2 935 aa10.64□□□□□ -0.71
SMARCA2-250ENST00000636367 HAX1O00165 279 aa10.64□□□□□ -0.71
SMARCA2-250ENST00000636367 RAB11FIP3O75154 756 aa10.64□□□□□ -0.71
SMARCA2-250ENST00000636367 MPSTP25325 297 aa10.64□□□□□ -0.71
SMARCA2-250ENST00000636367 NLGN1Q8N2Q7 840 aa10.64□□□□□ -0.71
SMARCA2-250ENST00000636367 WDR62O43379 1518 aa10.63□□□□□ -0.71
SMARCA2-250ENST00000636367 HDGFP51858 240 aaKnown RBP10.63□□□□□ -0.71
SMARCA2-250ENST00000636367 SDE2Q6IQ49 451 aa10.63□□□□□ -0.71
SMARCA2-250ENST00000636367 PDXDC2PQ6P474 469 aa10.63□□□□□ -0.71
SMARCA2-250ENST00000636367 SLC43A3Q8NBI5 491 aa10.63□□□□□ -0.71
SMARCA2-250ENST00000636367 TMC1Q8TDI8 760 aa10.63□□□□□ -0.71
SMARCA2-250ENST00000636367 GPSM3Q9Y4H4 160 aa10.62□□□□□ -0.71
SMARCA2-250ENST00000636367 CUX2O14529 1486 aa10.62□□□□□ -0.71
SMARCA2-250ENST00000636367 SORBS3O60504 671 aa10.61□□□□□ -0.71
SMARCA2-250ENST00000636367 SLC4A3P48751 1232 aa10.61□□□□□ -0.71
SMARCA2-250ENST00000636367 PTPRNQ16849 979 aa10.61□□□□□ -0.71
SMARCA2-250ENST00000636367 EGFLAMQ63HQ2 1017 aa10.61□□□□□ -0.71
SMARCA2-250ENST00000636367 TBX22Q9Y458 520 aa10.61□□□□□ -0.71
SMARCA2-250ENST00000636367 ZNF76P36508 570 aa10.61□□□□□ -0.71
SMARCA2-250ENST00000636367 TMC4Q7Z404 712 aa10.61□□□□□ -0.71
SMARCA2-250ENST00000636367 ZSWIM4Q9H7M6 989 aa10.61□□□□□ -0.71
SMARCA2-250ENST00000636367 ABCC8Q09428 1581 aa10.61□□□□□ -0.71
SMARCA2-250ENST00000636367 PRPF40AO75400 957 aaKnown RBP10.6□□□□□ -0.71
SMARCA2-250ENST00000636367 MCCD1P59942 119 aaPredicted RBP10.6□□□□□ -0.71
SMARCA2-250ENST00000636367 DSC3Q14574 896 aa10.6□□□□□ -0.71
SMARCA2-250ENST00000636367 KMT5BQ4FZB7 885 aa10.6□□□□□ -0.71
SMARCA2-250ENST00000636367 ZNF592Q92610 1267 aa10.6□□□□□ -0.71
SMARCA2-250ENST00000636367 DCBLD2Q96PD2 775 aa10.6□□□□□ -0.71
SMARCA2-250ENST00000636367 ARHGAP9Q9BRR9 750 aa10.6□□□□□ -0.71
SMARCA2-250ENST00000636367 TOPBP1Q92547 1522 aa10.6□□□□□ -0.71
SMARCA2-250ENST00000636367 PSDA5PKW4 1024 aaPredicted RBP10.59□□□□□ -0.71
SMARCA2-250ENST00000636367 NDUFB5O43674 189 aa10.59□□□□□ -0.71
SMARCA2-250ENST00000636367 JUNDP17535 347 aa10.59□□□□□ -0.71
SMARCA2-250ENST00000636367 DAB2P98082 770 aa10.59□□□□□ -0.71
SMARCA2-250ENST00000636367 PSMD2Q13200 908 aa10.59□□□□□ -0.71
SMARCA2-250ENST00000636367 CCDC87Q9NVE4 849 aa10.59□□□□□ -0.71
SMARCA2-250ENST00000636367 PTCD1O75127 700 aaKnown RBP10.59□□□□□ -0.71
SMARCA2-250ENST00000636367 GIGYF1O75420 1035 aaPredicted RBP10.59□□□□□ -0.71
SMARCA2-250ENST00000636367 EHHADHQ08426 723 aa10.59□□□□□ -0.71
SMARCA2-250ENST00000636367 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.59□□□□□ -0.71
SMARCA2-250ENST00000636367 RIMBP2O15034 1052 aa10.58□□□□□ -0.72
SMARCA2-250ENST00000636367 FAM13AO94988 1023 aa10.58□□□□□ -0.72
SMARCA2-250ENST00000636367 PPP1R18Q6NYC8 613 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms