RNA–Protein interactions for RNA: ENST00000633225.1

SKIDA1-204, Transcript of SKI/DACH domain containing 1, humanhuman

TSL 1 (best)

Gene SKIDA1, Length 1,452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-204ENST00000633225 U2AF1Q01081 240 aaKnown RBP eCLIP25.74■■□□□ 1.71
SKIDA1-204ENST00000633225 TATP17735 454 aaPredicted RBP25.73■■□□□ 1.71
SKIDA1-204ENST00000633225 RSPH6AQ9H0K4 717 aa25.73■■□□□ 1.71
SKIDA1-204ENST00000633225 DDB1Q16531 1140 aa25.72■■□□□ 1.71
SKIDA1-204ENST00000633225 MIER1Q8N108 512 aa25.72■■□□□ 1.71
SKIDA1-204ENST00000633225 MRS2Q9HD23 443 aa25.72■■□□□ 1.71
SKIDA1-204ENST00000633225 ILDR2Q71H61 639 aa25.72■■□□□ 1.71
SKIDA1-204ENST00000633225 EP400Q96L91 3159 aa25.71■■□□□ 1.71
SKIDA1-204ENST00000633225 PLEKHG2Q9H7P9 1386 aa25.71■■□□□ 1.71
SKIDA1-204ENST00000633225 EXOC5O00471 708 aa25.68■■□□□ 1.7
SKIDA1-204ENST00000633225 PRKAR2BP31323 418 aa25.68■■□□□ 1.7
SKIDA1-204ENST00000633225 ZCRB1Q8TBF4 217 aaKnown RBP25.68■■□□□ 1.7
SKIDA1-204ENST00000633225 KRT27Q7Z3Y8 459 aa25.67■■□□□ 1.7
SKIDA1-204ENST00000633225 MARCH10Q8NA82 808 aaPredicted RBP25.67■■□□□ 1.7
SKIDA1-204ENST00000633225 FCHSD2O94868 740 aa25.66■■□□□ 1.7
SKIDA1-204ENST00000633225 PNISRQ8TF01 805 aaKnown RBP25.66■■□□□ 1.7
SKIDA1-204ENST00000633225 FAM182BQ5T319 152 aa25.66■■□□□ 1.7
SKIDA1-204ENST00000633225 ADAMTS8Q9UP79 889 aa25.66■■□□□ 1.7
SKIDA1-204ENST00000633225 WDR43Q15061 677 aaKnown RBP eCLIP25.65■■□□□ 1.7
SKIDA1-204ENST00000633225 PLEKHF1Q96S99 279 aa25.65■■□□□ 1.7
SKIDA1-204ENST00000633225 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.65■■□□□ 1.7
SKIDA1-204ENST00000633225 CCER2I3L3R5 266 aa25.64■■□□□ 1.69
SKIDA1-204ENST00000633225 CYP27B1O15528 508 aa25.64■■□□□ 1.69
SKIDA1-204ENST00000633225 PDE3BQ13370 1112 aa25.64■■□□□ 1.69
SKIDA1-204ENST00000633225 PHACTR3Q96KR7 559 aa25.64■■□□□ 1.69
SKIDA1-204ENST00000633225 PCDH11XQ9BZA7 1347 aa25.63■■□□□ 1.69
SKIDA1-204ENST00000633225 PCDH11YQ9BZA8 1340 aa25.63■■□□□ 1.69
SKIDA1-204ENST00000633225 DDX54Q8TDD1 881 aaKnown RBP25.62■■□□□ 1.69
SKIDA1-204ENST00000633225 MTHFSDQ2M296 383 aaKnown RBP25.61■■□□□ 1.69
SKIDA1-204ENST00000633225 PLEKHO1Q53GL0 409 aaPredicted RBP25.61■■□□□ 1.69
SKIDA1-204ENST00000633225 SPG7Q9UQ90 795 aa25.61■■□□□ 1.69
SKIDA1-204ENST00000633225 AMOTQ4VCS5 1084 aa25.6■■□□□ 1.69
SKIDA1-204ENST00000633225 TOGARAM1Q9Y4F4 1720 aa25.59■■□□□ 1.69
SKIDA1-204ENST00000633225 PHKG2P15735 406 aa25.59■■□□□ 1.69
SKIDA1-204ENST00000633225 ZNF530Q6P9A1 599 aaPredicted RBP25.59■■□□□ 1.69
SKIDA1-204ENST00000633225 CCDC146Q8IYE0 955 aa25.59■■□□□ 1.69
SKIDA1-204ENST00000633225 BCL9O00512 1426 aa25.58■■□□□ 1.69
SKIDA1-204ENST00000633225 SBF2Q86WG5 1849 aa25.58■■□□□ 1.68
SKIDA1-204ENST00000633225 DOT1LQ8TEK3 1739 aa25.57■■□□□ 1.68
SKIDA1-204ENST00000633225 IFNL2Q8IZJ0 200 aa25.55■■□□□ 1.68
SKIDA1-204ENST00000633225 KDM6AO15550 1401 aaPredicted RBP25.55■■□□□ 1.68
SKIDA1-204ENST00000633225 ADAMTS7Q9UKP4 1686 aa25.54■■□□□ 1.68
SKIDA1-204ENST00000633225 DLG5Q8TDM6 1919 aa25.53■■□□□ 1.68
SKIDA1-204ENST00000633225 NKX1-1Q15270 411 aaPredicted RBP25.53■■□□□ 1.68
SKIDA1-204ENST00000633225 VIRMAQ69YN4 1812 aaKnown RBP25.53■■□□□ 1.68
SKIDA1-204ENST00000633225 FAM9BQ8IZU0 186 aa25.53■■□□□ 1.68
SKIDA1-204ENST00000633225 GAS2L2Q8NHY3 880 aa25.53■■□□□ 1.68
SKIDA1-204ENST00000633225 NHSQ6T4R5 1651 aa25.52■■□□□ 1.68
SKIDA1-204ENST00000633225 AKAP4Q5JQC9 854 aa25.52■■□□□ 1.68
SKIDA1-204ENST00000633225 FAM196AQ6ZSG2 479 aa25.52■■□□□ 1.68
SKIDA1-204ENST00000633225 RUNDC1Q96C34 613 aa25.52■■□□□ 1.68
SKIDA1-204ENST00000633225 PNNQ9H307 717 aaKnown RBP25.52■■□□□ 1.68
SKIDA1-204ENST00000633225 MAPK8IP3Q9UPT6 1336 aa25.51■■□□□ 1.67
SKIDA1-204ENST00000633225 SCN11AQ9UI33 1791 aa25.51■■□□□ 1.67
SKIDA1-204ENST00000633225 C1orf141Q5JVX7 400 aa25.5■■□□□ 1.67
SKIDA1-204ENST00000633225 MAP3K5Q99683 1374 aa25.5■■□□□ 1.67
SKIDA1-204ENST00000633225 TNS1Q9HBL0 1735 aaKnown RBP25.49■■□□□ 1.67
SKIDA1-204ENST00000633225 NFE2L2Q16236 605 aa25.48■■□□□ 1.67
SKIDA1-204ENST00000633225 PTF1AQ7RTS3 328 aa25.48■■□□□ 1.67
SKIDA1-204ENST00000633225 ACSBG1Q96GR2 724 aa25.48■■□□□ 1.67
SKIDA1-204ENST00000633225 MPRIPQ6WCQ1 1025 aa25.47■■□□□ 1.67
SKIDA1-204ENST00000633225 ITGB4P16144 1822 aa25.47■■□□□ 1.67
SKIDA1-204ENST00000633225 KCNQ2O43526 872 aa25.47■■□□□ 1.67
SKIDA1-204ENST00000633225 NEFMP07197 916 aa25.47■■□□□ 1.67
SKIDA1-204ENST00000633225 TMPOP42166 694 aaKnown RBP25.46■■□□□ 1.67
SKIDA1-204ENST00000633225 DCAF5Q96JK2 942 aa25.46■■□□□ 1.67
SKIDA1-204ENST00000633225 LGR6Q9HBX8 967 aa25.46■■□□□ 1.67
SKIDA1-204ENST00000633225 MRC1P22897 1456 aa25.45■■□□□ 1.66
SKIDA1-204ENST00000633225 GNAT3A8MTJ3 354 aa25.45■■□□□ 1.66
SKIDA1-204ENST00000633225 TRIM37O94972 964 aa25.45■■□□□ 1.66
SKIDA1-204ENST00000633225 HSP90AB1P08238 724 aaKnown RBP25.45■■□□□ 1.66
SKIDA1-204ENST00000633225 RRP7AQ9Y3A4 280 aaKnown RBP25.45■■□□□ 1.66
SKIDA1-204ENST00000633225 APAF1O14727 1248 aa25.44■■□□□ 1.66
SKIDA1-204ENST00000633225 RNMTO43148 476 aaKnown RBP25.44■■□□□ 1.66
SKIDA1-204ENST00000633225 KAT6BQ8WYB5 2073 aa25.43■■□□□ 1.66
SKIDA1-204ENST00000633225 CEMIPQ8WUJ3 1361 aa25.42■■□□□ 1.66
SKIDA1-204ENST00000633225 BTAF1O14981 1849 aa25.42■■□□□ 1.66
SKIDA1-204ENST00000633225 PRIM1P49642 420 aaKnown RBP25.42■■□□□ 1.66
SKIDA1-204ENST00000633225 IL17REQ8NFR9 667 aa25.42■■□□□ 1.66
SKIDA1-204ENST00000633225 SENP3-EIF4A1A0A087X0R7 540 aa25.41■■□□□ 1.66
SKIDA1-204ENST00000633225 SIPA1L3O60292 1781 aaPredicted RBP25.41■■□□□ 1.66
SKIDA1-204ENST00000633225 RIPK4P57078 832 aa25.4■■□□□ 1.66
SKIDA1-204ENST00000633225 DCTN1Q14203 1278 aa25.4■■□□□ 1.66
SKIDA1-204ENST00000633225 NEUROD2Q15784 382 aa25.4■■□□□ 1.66
SKIDA1-204ENST00000633225 MCM10Q7L590 875 aa25.4■■□□□ 1.66
SKIDA1-204ENST00000633225 SYTL4Q96C24 671 aaPredicted RBP25.4■■□□□ 1.66
SKIDA1-204ENST00000633225 BCL11BQ9C0K0 894 aaPredicted RBP25.4■■□□□ 1.66
SKIDA1-204ENST00000633225 ERVV-2B6SEH9 535 aa25.39■■□□□ 1.65
SKIDA1-204ENST00000633225 UPF1Q92900 1129 aaKnown RBP eCLIP25.39■■□□□ 1.65
SKIDA1-204ENST00000633225 TRIM35Q9UPQ4 493 aa25.38■■□□□ 1.65
SKIDA1-204ENST00000633225 HTATSF1O43719 755 aaKnown RBP25.37■■□□□ 1.65
SKIDA1-204ENST00000633225 THUMPD2Q9BTF0 503 aaKnown RBP25.37■■□□□ 1.65
SKIDA1-204ENST00000633225 PIGBQ92521 554 aa25.36■■□□□ 1.65
SKIDA1-204ENST00000633225 SLC52A2Q9HAB3 445 aa25.36■■□□□ 1.65
SKIDA1-204ENST00000633225 PAPPAQ13219 1627 aa25.35■■□□□ 1.65
SKIDA1-204ENST00000633225 RTF1Q92541 710 aaKnown RBP25.34■■□□□ 1.65
SKIDA1-204ENST00000633225 TMOD3Q9NYL9 352 aa25.34■■□□□ 1.65
SKIDA1-204ENST00000633225 CABP4P57796 275 aa25.34■■□□□ 1.65
SKIDA1-204ENST00000633225 NFATC2IPQ8NCF5 419 aa25.34■■□□□ 1.65
SKIDA1-204ENST00000633225 LMOD3Q0VAK6 560 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms