RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 SPG7Q9UQ90 795 aa13.19□□□□□ -0.3
FOXCUT-201ENST00000628509 COL18A1P39060 1754 aa13.19□□□□□ -0.3
FOXCUT-201ENST00000628509 CAMTA1Q9Y6Y1 1673 aa13.18□□□□□ -0.3
FOXCUT-201ENST00000628509 ZNF521Q96K83 1311 aa13.18□□□□□ -0.3
FOXCUT-201ENST00000628509 GNAI1P63096 354 aa13.18□□□□□ -0.3
FOXCUT-201ENST00000628509 NCAPD2Q15021 1401 aa13.18□□□□□ -0.3
FOXCUT-201ENST00000628509 GNAT3A8MTJ3 354 aa13.17□□□□□ -0.3
FOXCUT-201ENST00000628509 HSP90AB1P08238 724 aaKnown RBP13.17□□□□□ -0.3
FOXCUT-201ENST00000628509 POLA2Q14181 598 aa13.17□□□□□ -0.3
FOXCUT-201ENST00000628509 CHRNA2Q15822 529 aa13.17□□□□□ -0.3
FOXCUT-201ENST00000628509 NBPF6Q5VWK0 638 aa13.17□□□□□ -0.3
FOXCUT-201ENST00000628509 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.17□□□□□ -0.3
FOXCUT-201ENST00000628509 NBPF4Q96M43 638 aa13.17□□□□□ -0.3
FOXCUT-201ENST00000628509 CDCA7Q9BWT1 371 aaPredicted RBP13.17□□□□□ -0.3
FOXCUT-201ENST00000628509 RRP7AQ9Y3A4 280 aaKnown RBP13.17□□□□□ -0.3
FOXCUT-201ENST00000628509 LMO7Q8WWI1 1683 aa13.16□□□□□ -0.3
FOXCUT-201ENST00000628509 SLFN5Q08AF3 891 aa13.16□□□□□ -0.3
FOXCUT-201ENST00000628509 AEBP1Q8IUX7 1158 aa13.16□□□□□ -0.3
FOXCUT-201ENST00000628509 CARD10Q9BWT7 1032 aa13.16□□□□□ -0.3
FOXCUT-201ENST00000628509 BABAM1Q9NWV8 329 aa13.16□□□□□ -0.3
FOXCUT-201ENST00000628509 AXIN2Q9Y2T1 843 aa13.16□□□□□ -0.3
FOXCUT-201ENST00000628509 RGPD5Q99666 1765 aa13.16□□□□□ -0.3
FOXCUT-201ENST00000628509 COL5A2P05997 1499 aaPredicted RBP13.16□□□□□ -0.3
FOXCUT-201ENST00000628509 CRB1P82279 1406 aa13.15□□□□□ -0.3
FOXCUT-201ENST00000628509 AKAP4Q5JQC9 854 aa13.15□□□□□ -0.3
FOXCUT-201ENST00000628509 ZNF428Q96B54 188 aa13.15□□□□□ -0.3
FOXCUT-201ENST00000628509 PHACTR3Q96KR7 559 aa13.15□□□□□ -0.3
FOXCUT-201ENST00000628509 IFT57Q9NWB7 429 aa13.15□□□□□ -0.3
FOXCUT-201ENST00000628509 MAP3K5Q99683 1374 aa13.15□□□□□ -0.3
FOXCUT-201ENST00000628509 NWD2Q9ULI1 1742 aa13.14□□□□□ -0.31
FOXCUT-201ENST00000628509 FAM83GA6ND36 823 aa13.14□□□□□ -0.31
FOXCUT-201ENST00000628509 STRN4Q9NRL3 753 aa13.14□□□□□ -0.31
FOXCUT-201ENST00000628509 BTG4Q9NY30 223 aa13.14□□□□□ -0.31
FOXCUT-201ENST00000628509 THRAP3Q9Y2W1 955 aaKnown RBP13.14□□□□□ -0.31
FOXCUT-201ENST00000628509 PARP4Q9UKK3 1724 aaKnown RBP13.13□□□□□ -0.31
FOXCUT-201ENST00000628509 NUTM2BA6NNL0 878 aaPredicted RBP13.13□□□□□ -0.31
FOXCUT-201ENST00000628509 NUTM2EB1AL46 878 aaPredicted RBP13.13□□□□□ -0.31
FOXCUT-201ENST00000628509 MEX3CQ5U5Q3 659 aaKnown RBP13.13□□□□□ -0.31
FOXCUT-201ENST00000628509 NUTM2AQ8IVF1 878 aaPredicted RBP13.13□□□□□ -0.31
FOXCUT-201ENST00000628509 OVOS2A0A0G2JMS6 1433 aa13.13□□□□□ -0.31
FOXCUT-201ENST00000628509 DLG5Q8TDM6 1919 aa13.12□□□□□ -0.31
FOXCUT-201ENST00000628509 IL2RBP14784 551 aa13.12□□□□□ -0.31
FOXCUT-201ENST00000628509 MTHFSDQ2M296 383 aaKnown RBP13.12□□□□□ -0.31
FOXCUT-201ENST00000628509 ZNF530Q6P9A1 599 aaPredicted RBP13.12□□□□□ -0.31
FOXCUT-201ENST00000628509 CFAP44Q96MT7 982 aa13.12□□□□□ -0.31
FOXCUT-201ENST00000628509 RCAN3Q9UKA8 241 aa13.12□□□□□ -0.31
FOXCUT-201ENST00000628509 TRIM35Q9UPQ4 493 aa13.12□□□□□ -0.31
FOXCUT-201ENST00000628509 SOS1Q07889 1333 aaPredicted RBP13.12□□□□□ -0.31
FOXCUT-201ENST00000628509 ADAMTS2O95450 1211 aa13.11□□□□□ -0.31
FOXCUT-201ENST00000628509 DUSP27Q5VZP5 1158 aa13.11□□□□□ -0.31
FOXCUT-201ENST00000628509 TRMT2AQ8IZ69 625 aaKnown RBP13.11□□□□□ -0.31
FOXCUT-201ENST00000628509 IFNL2Q8IZJ0 200 aa13.11□□□□□ -0.31
FOXCUT-201ENST00000628509 USHBP1Q8N6Y0 703 aa13.11□□□□□ -0.31
FOXCUT-201ENST00000628509 PCDH11XQ9BZA7 1347 aa13.11□□□□□ -0.31
FOXCUT-201ENST00000628509 PCDH11YQ9BZA8 1340 aa13.11□□□□□ -0.31
FOXCUT-201ENST00000628509 RGPD2P0DJD1 1756 aa13.1□□□□□ -0.31
FOXCUT-201ENST00000628509 TEFQ10587 303 aa13.1□□□□□ -0.31
FOXCUT-201ENST00000628509 ERICH6BQ5W0A0 696 aa13.1□□□□□ -0.31
FOXCUT-201ENST00000628509 NGLY1Q96IV0 654 aa13.1□□□□□ -0.31
FOXCUT-201ENST00000628509 PLCH1Q4KWH8 1693 aa13.09□□□□□ -0.31
FOXCUT-201ENST00000628509 MS4A1P11836 297 aa13.09□□□□□ -0.31
FOXCUT-201ENST00000628509 CDCA7LQ96GN5 454 aa13.09□□□□□ -0.31
FOXCUT-201ENST00000628509 LAS1LQ9Y4W2 734 aaKnown RBP13.09□□□□□ -0.31
FOXCUT-201ENST00000628509 SENP3-EIF4A1A0A087X0R7 540 aa13.08□□□□□ -0.32
FOXCUT-201ENST00000628509 ZCRB1Q8TBF4 217 aaKnown RBP13.08□□□□□ -0.32
FOXCUT-201ENST00000628509 DCAF5Q96JK2 942 aa13.08□□□□□ -0.32
FOXCUT-201ENST00000628509 HSPA1LP34931 641 aa13.07□□□□□ -0.32
FOXCUT-201ENST00000628509 TAF7Q15545 349 aaPredicted RBP13.07□□□□□ -0.32
FOXCUT-201ENST00000628509 LARP1Q6PKG0 1096 aaKnown RBP13.07□□□□□ -0.32
FOXCUT-201ENST00000628509 UNC5CLQ8IV45 518 aa13.07□□□□□ -0.32
FOXCUT-201ENST00000628509 CCDC9Q9Y3X0 531 aaKnown RBP13.07□□□□□ -0.32
FOXCUT-201ENST00000628509 FANCIQ9NVI1 1328 aa13.07□□□□□ -0.32
FOXCUT-201ENST00000628509 PKD1L3Q7Z443 1732 aa13.06□□□□□ -0.32
FOXCUT-201ENST00000628509 SUPT16HQ9Y5B9 1047 aaKnown RBP13.06□□□□□ -0.32
FOXCUT-201ENST00000628509 SLIT2O94813 1529 aa13.05□□□□□ -0.32
FOXCUT-201ENST00000628509 EXOC5O00471 708 aa13.05□□□□□ -0.32
FOXCUT-201ENST00000628509 CANXP27824 592 aaKnown RBP13.05□□□□□ -0.32
FOXCUT-201ENST00000628509 MCM10Q7L590 875 aa13.05□□□□□ -0.32
FOXCUT-201ENST00000628509 C8orf37Q96NL8 207 aa13.05□□□□□ -0.32
FOXCUT-201ENST00000628509 TSPYL4Q9UJ04 414 aa13.05□□□□□ -0.32
FOXCUT-201ENST00000628509 CHL1O00533 1208 aa13.04□□□□□ -0.32
FOXCUT-201ENST00000628509 IPO8O15397 1037 aaKnown RBP13.04□□□□□ -0.32
FOXCUT-201ENST00000628509 ZNF853P0CG23 659 aa13.04□□□□□ -0.32
FOXCUT-201ENST00000628509 PHKG2P15735 406 aa13.04□□□□□ -0.32
FOXCUT-201ENST00000628509 ALDH1L2Q3SY69 923 aa13.04□□□□□ -0.32
FOXCUT-201ENST00000628509 BARGINQ6ZT62 677 aa13.04□□□□□ -0.32
FOXCUT-201ENST00000628509 FNBP4Q8N3X1 1017 aaPredicted RBP13.04□□□□□ -0.32
FOXCUT-201ENST00000628509 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.04□□□□□ -0.32
FOXCUT-201ENST00000628509 CEMIPQ8WUJ3 1361 aa13.04□□□□□ -0.32
FOXCUT-201ENST00000628509 MEGF6O75095 1541 aa13.03□□□□□ -0.32
FOXCUT-201ENST00000628509 RNMTO43148 476 aaKnown RBP13.03□□□□□ -0.32
FOXCUT-201ENST00000628509 VPS72Q15906 364 aa13.03□□□□□ -0.32
FOXCUT-201ENST00000628509 MBIPQ9NS73 344 aa13.03□□□□□ -0.32
FOXCUT-201ENST00000628509 USP35Q9P2H5 1018 aa13.03□□□□□ -0.32
FOXCUT-201ENST00000628509 SPATA31A1Q5TZJ5 1347 aa13.03□□□□□ -0.32
FOXCUT-201ENST00000628509 KIF16BQ96L93 1317 aa13.03□□□□□ -0.32
FOXCUT-201ENST00000628509 NRAPQ86VF7 1730 aa13.02□□□□□ -0.32
FOXCUT-201ENST00000628509 ERVV-2B6SEH9 535 aa13.02□□□□□ -0.33
FOXCUT-201ENST00000628509 HOXB7P09629 217 aa13.02□□□□□ -0.33
FOXCUT-201ENST00000628509 EXOSC9Q06265 439 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms