RNA–Protein interactions for RNA: ENST00000627441.2

SPTAN1-212, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-212ENST00000627441 RRAGCQ9HB90 399 aa12.43□□□□□ -0.42
SPTAN1-212ENST00000627441 TAF1LQ8IZX4 1826 aa12.43□□□□□ -0.42
SPTAN1-212ENST00000627441 KIF13BQ9NQT8 1826 aa12.43□□□□□ -0.42
SPTAN1-212ENST00000627441 PXDNLA1KZ92 1463 aa12.42□□□□□ -0.42
SPTAN1-212ENST00000627441 NUDT16Q96DE0 195 aaKnown RBP12.42□□□□□ -0.42
SPTAN1-212ENST00000627441 SBF1O95248 1867 aa12.42□□□□□ -0.42
SPTAN1-212ENST00000627441 SMC1BQ8NDV3 1235 aa12.41□□□□□ -0.42
SPTAN1-212ENST00000627441 CARD10Q9BWT7 1032 aa12.41□□□□□ -0.42
SPTAN1-212ENST00000627441 TRAK1Q9UPV9 953 aa12.41□□□□□ -0.42
SPTAN1-212ENST00000627441 VIRMAQ69YN4 1812 aaKnown RBP12.41□□□□□ -0.42
SPTAN1-212ENST00000627441 CPSF1Q10570 1443 aaKnown RBP12.4□□□□□ -0.42
SPTAN1-212ENST00000627441 MKRN1Q9UHC7 482 aaKnown RBP12.4□□□□□ -0.42
SPTAN1-212ENST00000627441 CCDC85CA6NKD9 419 aa12.39□□□□□ -0.43
SPTAN1-212ENST00000627441 LBX1P52954 281 aa12.39□□□□□ -0.43
SPTAN1-212ENST00000627441 NSD2O96028 1365 aa12.39□□□□□ -0.43
SPTAN1-212ENST00000627441 ARFGEF1Q9Y6D6 1849 aa12.39□□□□□ -0.43
SPTAN1-212ENST00000627441 ERBB3P21860 1342 aa12.38□□□□□ -0.43
SPTAN1-212ENST00000627441 APLP2Q06481 763 aa12.38□□□□□ -0.43
SPTAN1-212ENST00000627441 C9orf131Q5VYM1 1079 aa12.38□□□□□ -0.43
SPTAN1-212ENST00000627441 NLRP13Q86W25 1043 aa12.38□□□□□ -0.43
SPTAN1-212ENST00000627441 AMIGO3Q86WK7 504 aa12.38□□□□□ -0.43
SPTAN1-212ENST00000627441 UBR3Q6ZT12 1888 aa12.38□□□□□ -0.43
SPTAN1-212ENST00000627441 CSB-PGBD3P0DP91 1061 aa12.37□□□□□ -0.43
SPTAN1-212ENST00000627441 ARHGAP27Q6ZUM4 889 aa12.37□□□□□ -0.43
SPTAN1-212ENST00000627441 PLEKHG2Q9H7P9 1386 aa12.36□□□□□ -0.43
SPTAN1-212ENST00000627441 BCS1LQ9Y276 419 aa12.36□□□□□ -0.43
SPTAN1-212ENST00000627441 CCDC7Q96M83 1385 aa12.35□□□□□ -0.43
SPTAN1-212ENST00000627441 CTCFP49711 727 aaPredicted RBP12.35□□□□□ -0.43
SPTAN1-212ENST00000627441 CCNL1Q9UK58 526 aaPredicted RBP12.35□□□□□ -0.43
SPTAN1-212ENST00000627441 KDM2BQ8NHM5 1336 aa12.34□□□□□ -0.43
SPTAN1-212ENST00000627441 C4BP0C0L5 1744 aa12.33□□□□□ -0.44
SPTAN1-212ENST00000627441 HSPA8P11142 646 aaKnown RBP12.32□□□□□ -0.44
SPTAN1-212ENST00000627441 SYTL4Q96C24 671 aaPredicted RBP12.32□□□□□ -0.44
SPTAN1-212ENST00000627441 PLEKHG3A1L390 1219 aa12.31□□□□□ -0.44
SPTAN1-212ENST00000627441 NLRP6P59044 892 aa12.31□□□□□ -0.44
SPTAN1-212ENST00000627441 ARHGEF25Q86VW2 580 aa12.31□□□□□ -0.44
SPTAN1-212ENST00000627441 SLC4A1APQ9BWU0 796 aaKnown RBP12.31□□□□□ -0.44
SPTAN1-212ENST00000627441 CCDC88AQ3V6T2 1871 aa12.3□□□□□ -0.44
SPTAN1-212ENST00000627441 A0A0G2JLW4 131 aa12.3□□□□□ -0.44
SPTAN1-212ENST00000627441 SOX12O15370 315 aa12.3□□□□□ -0.44
SPTAN1-212ENST00000627441 PRIM1P49642 420 aaKnown RBP12.3□□□□□ -0.44
SPTAN1-212ENST00000627441 CDK19Q9BWU1 502 aa12.3□□□□□ -0.44
SPTAN1-212ENST00000627441 RNF181Q9P0P0 153 aa12.3□□□□□ -0.44
SPTAN1-212ENST00000627441 TIAM2Q8IVF5 1701 aa12.3□□□□□ -0.44
SPTAN1-212ENST00000627441 NFAT5O94916 1531 aa12.3□□□□□ -0.44
SPTAN1-212ENST00000627441 CNTNAP1P78357 1384 aa12.3□□□□□ -0.44
SPTAN1-212ENST00000627441 LOC105371045A0A1W2PR82 267 aa12.29□□□□□ -0.44
SPTAN1-212ENST00000627441 AIDAQ96BJ3 306 aa12.29□□□□□ -0.44
SPTAN1-212ENST00000627441 IL2RBP14784 551 aa12.28□□□□□ -0.44
SPTAN1-212ENST00000627441 CFAP44Q96MT7 982 aa12.28□□□□□ -0.44
SPTAN1-212ENST00000627441 WBP1LQ9NX94 342 aa12.28□□□□□ -0.44
SPTAN1-212ENST00000627441 ANKRD36BQ8N2N9 1353 aa12.28□□□□□ -0.44
SPTAN1-212ENST00000627441 LTN1O94822 1766 aa12.28□□□□□ -0.44
SPTAN1-212ENST00000627441 FCHSD2O94868 740 aa12.27□□□□□ -0.45
SPTAN1-212ENST00000627441 PHF14O94880 888 aa12.27□□□□□ -0.45
SPTAN1-212ENST00000627441 CREBZFQ9NS37 354 aa12.27□□□□□ -0.45
SPTAN1-212ENST00000627441 CCDC61Q9Y6R9 512 aa12.27□□□□□ -0.45
SPTAN1-212ENST00000627441 DPEP1P16444 411 aa12.26□□□□□ -0.45
SPTAN1-212ENST00000627441 VEGFBP49765 207 aa12.26□□□□□ -0.45
SPTAN1-212ENST00000627441 DDX54Q8TDD1 881 aaKnown RBP12.26□□□□□ -0.45
SPTAN1-212ENST00000627441 POTECB2RU33 542 aa12.25□□□□□ -0.45
SPTAN1-212ENST00000627441 NLRP2Q9NX02 1062 aa12.25□□□□□ -0.45
SPTAN1-212ENST00000627441 RGPD2P0DJD1 1756 aa12.23□□□□□ -0.45
SPTAN1-212ENST00000627441 USP47Q96K76 1375 aa12.22□□□□□ -0.45
SPTAN1-212ENST00000627441 POTEIP0CG38 1075 aa12.22□□□□□ -0.45
SPTAN1-212ENST00000627441 POTEJP0CG39 1038 aa12.22□□□□□ -0.45
SPTAN1-212ENST00000627441 VEGFAP15692 232 aaPredicted RBP12.22□□□□□ -0.45
SPTAN1-212ENST00000627441 KCNA3P22001 575 aa12.22□□□□□ -0.45
SPTAN1-212ENST00000627441 RASSF7Q02833 373 aa12.22□□□□□ -0.45
SPTAN1-212ENST00000627441 FLAD1Q8NFF5 587 aa12.22□□□□□ -0.45
SPTAN1-212ENST00000627441 C4AP0C0L4 1744 aa12.22□□□□□ -0.45
SPTAN1-212ENST00000627441 CASP8AP2Q9UKL3 1982 aa12.21□□□□□ -0.45
SPTAN1-212ENST00000627441 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.21□□□□□ -0.45
SPTAN1-212ENST00000627441 MMP10P09238 476 aa12.21□□□□□ -0.45
SPTAN1-212ENST00000627441 TGFB2P61812 414 aa12.2□□□□□ -0.46
SPTAN1-212ENST00000627441 DCAF5Q96JK2 942 aa12.2□□□□□ -0.46
SPTAN1-212ENST00000627441 MAP2P11137 1827 aaKnown RBP12.2□□□□□ -0.46
SPTAN1-212ENST00000627441 LTBP1Q14766 1721 aa12.2□□□□□ -0.46
SPTAN1-212ENST00000627441 FAM208AQ9UK61 1670 aaKnown RBP12.19□□□□□ -0.46
SPTAN1-212ENST00000627441 ITGB4P16144 1822 aa12.19□□□□□ -0.46
SPTAN1-212ENST00000627441 KDM6AO15550 1401 aaPredicted RBP12.19□□□□□ -0.46
SPTAN1-212ENST00000627441 THSD7BQ9C0I4 1608 aa12.19□□□□□ -0.46
SPTAN1-212ENST00000627441 GLTPD2A6NH11 291 aa12.18□□□□□ -0.46
SPTAN1-212ENST00000627441 PRPF38BQ5VTL8 546 aaKnown RBP12.18□□□□□ -0.46
SPTAN1-212ENST00000627441 AK7Q96M32 723 aa12.18□□□□□ -0.46
SPTAN1-212ENST00000627441 MCOLN1Q9GZU1 580 aa12.17□□□□□ -0.46
SPTAN1-212ENST00000627441 CABP2Q9NPB3 220 aa12.17□□□□□ -0.46
SPTAN1-212ENST00000627441 TSKSQ9UJT2 592 aa12.17□□□□□ -0.46
SPTAN1-212ENST00000627441 PALLDQ8WX93 1383 aa12.17□□□□□ -0.46
SPTAN1-212ENST00000627441 PASKQ96RG2 1323 aa12.16□□□□□ -0.46
SPTAN1-212ENST00000627441 ANKRD24Q8TF21 1146 aa12.16□□□□□ -0.46
SPTAN1-212ENST00000627441 SOX10P56693 466 aa12.14□□□□□ -0.47
SPTAN1-212ENST00000627441 CHADLQ6NUI6 762 aa12.14□□□□□ -0.47
SPTAN1-212ENST00000627441 KCNH5Q8NCM2 988 aa12.14□□□□□ -0.47
SPTAN1-212ENST00000627441 MEGF6O75095 1541 aa12.14□□□□□ -0.47
SPTAN1-212ENST00000627441 LINC00116Q8NCU8 138 aa12.13□□□□□ -0.47
SPTAN1-212ENST00000627441 CABP1Q9NZU7 370 aa12.13□□□□□ -0.47
SPTAN1-212ENST00000627441 DICER1Q9UPY3 1922 aaKnown RBP12.13□□□□□ -0.47
SPTAN1-212ENST00000627441 SSFA2P28290 1259 aa12.12□□□□□ -0.47
SPTAN1-212ENST00000627441 SRPK2P78362 688 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms