RNA–Protein interactions for RNA: ENST00000620309.4

PSMB3-212, Transcript of proteasome subunit beta 3, humanhuman

TSL 2

Gene PSMB3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-212ENST00000620309 SGIP1Q9BQI5 828 aa9.55□□□□□ -0.88
PSMB3-212ENST00000620309 MAP3K19Q56UN5 1328 aa9.55□□□□□ -0.88
PSMB3-212ENST00000620309 WDR17Q8IZU2 1322 aa9.55□□□□□ -0.88
PSMB3-212ENST00000620309 COL24A1Q17RW2 1714 aa9.54□□□□□ -0.88
PSMB3-212ENST00000620309 MAP3K5Q99683 1374 aa9.54□□□□□ -0.88
PSMB3-212ENST00000620309 ARHGEF25Q86VW2 580 aa9.54□□□□□ -0.88
PSMB3-212ENST00000620309 MIER1Q8N108 512 aa9.54□□□□□ -0.88
PSMB3-212ENST00000620309 SYT17Q9BSW7 474 aa9.54□□□□□ -0.88
PSMB3-212ENST00000620309 CCER2I3L3R5 266 aa9.53□□□□□ -0.88
PSMB3-212ENST00000620309 PLSCR1O15162 318 aa9.53□□□□□ -0.88
PSMB3-212ENST00000620309 CNGB1Q14028 1251 aaPredicted RBP9.53□□□□□ -0.88
PSMB3-212ENST00000620309 CDCA7Q9BWT1 371 aaPredicted RBP9.53□□□□□ -0.88
PSMB3-212ENST00000620309 USP35Q9P2H5 1018 aa9.53□□□□□ -0.88
PSMB3-212ENST00000620309 POLKQ9UBT6 870 aa9.53□□□□□ -0.88
PSMB3-212ENST00000620309 EMILIN1Q9Y6C2 1016 aa9.53□□□□□ -0.88
PSMB3-212ENST00000620309 TNNT2P45379 298 aaPredicted RBP9.52□□□□□ -0.89
PSMB3-212ENST00000620309 RRS1Q15050 365 aaKnown RBP9.52□□□□□ -0.89
PSMB3-212ENST00000620309 TCP11L2Q8N4U5 519 aa9.52□□□□□ -0.89
PSMB3-212ENST00000620309 FHDC1Q9C0D6 1143 aaPredicted RBP9.52□□□□□ -0.89
PSMB3-212ENST00000620309 ERBB3P21860 1342 aa9.52□□□□□ -0.89
PSMB3-212ENST00000620309 FBLN1P23142 703 aa9.51□□□□□ -0.89
PSMB3-212ENST00000620309 CCDC184Q52MB2 194 aa9.51□□□□□ -0.89
PSMB3-212ENST00000620309 LARP1Q6PKG0 1096 aaKnown RBP9.51□□□□□ -0.89
PSMB3-212ENST00000620309 PROM2Q8N271 834 aa9.51□□□□□ -0.89
PSMB3-212ENST00000620309 PAPPAQ13219 1627 aa9.51□□□□□ -0.89
PSMB3-212ENST00000620309 OVOS2A0A0G2JMS6 1433 aa9.5□□□□□ -0.89
PSMB3-212ENST00000620309 BCL9O00512 1426 aa9.5□□□□□ -0.89
PSMB3-212ENST00000620309 GIGYF1O75420 1035 aaPredicted RBP9.5□□□□□ -0.89
PSMB3-212ENST00000620309 MTHFSP49914 203 aa9.5□□□□□ -0.89
PSMB3-212ENST00000620309 PDE3BQ13370 1112 aa9.5□□□□□ -0.89
PSMB3-212ENST00000620309 ANKRD24Q8TF21 1146 aa9.5□□□□□ -0.89
PSMB3-212ENST00000620309 IP6K1Q92551 441 aa9.5□□□□□ -0.89
PSMB3-212ENST00000620309 ADAMTS7Q9UKP4 1686 aa9.5□□□□□ -0.89
PSMB3-212ENST00000620309 KDRP35968 1356 aa9.5□□□□□ -0.89
PSMB3-212ENST00000620309 TNS2Q63HR2 1409 aa9.49□□□□□ -0.89
PSMB3-212ENST00000620309 PPM1GO15355 546 aaPredicted RBP9.49□□□□□ -0.89
PSMB3-212ENST00000620309 ZBTB7AO95365 584 aa9.49□□□□□ -0.89
PSMB3-212ENST00000620309 HOXC9P31274 260 aa9.49□□□□□ -0.89
PSMB3-212ENST00000620309 CARD10Q9BWT7 1032 aa9.49□□□□□ -0.89
PSMB3-212ENST00000620309 NLRP2Q9NX02 1062 aa9.49□□□□□ -0.89
PSMB3-212ENST00000620309 DOT1LQ8TEK3 1739 aa9.48□□□□□ -0.89
PSMB3-212ENST00000620309 DDB1Q16531 1140 aa9.48□□□□□ -0.89
PSMB3-212ENST00000620309 PTF1AQ7RTS3 328 aa9.48□□□□□ -0.89
PSMB3-212ENST00000620309 MRS2Q9HD23 443 aa9.48□□□□□ -0.89
PSMB3-212ENST00000620309 NHSQ6T4R5 1651 aa9.48□□□□□ -0.89
PSMB3-212ENST00000620309 QSER1Q2KHR3 1735 aa9.48□□□□□ -0.89
PSMB3-212ENST00000620309 TOGARAM1Q9Y4F4 1720 aa9.48□□□□□ -0.89
PSMB3-212ENST00000620309 SIPA1L3O60292 1781 aaPredicted RBP9.47□□□□□ -0.89
PSMB3-212ENST00000620309 SCN11AQ9UI33 1791 aa9.47□□□□□ -0.89
PSMB3-212ENST00000620309 LTV1Q96GA3 475 aaPredicted RBP9.47□□□□□ -0.89
PSMB3-212ENST00000620309 ATF5Q9Y2D1 282 aaPredicted RBP9.47□□□□□ -0.89
PSMB3-212ENST00000620309 AXIN2Q9Y2T1 843 aa9.47□□□□□ -0.89
PSMB3-212ENST00000620309 KAT6BQ8WYB5 2073 aa9.47□□□□□ -0.89
PSMB3-212ENST00000620309 IGSF1Q8N6C5 1336 aa9.47□□□□□ -0.89
PSMB3-212ENST00000620309 PLEKHG2Q9H7P9 1386 aa9.47□□□□□ -0.89
PSMB3-212ENST00000620309 IL2RBP14784 551 aa9.46□□□□□ -0.9
PSMB3-212ENST00000620309 EIF4A2Q14240 407 aaKnown RBP9.46□□□□□ -0.9
PSMB3-212ENST00000620309 HSP90AB2PQ58FF8 381 aa9.46□□□□□ -0.9
PSMB3-212ENST00000620309 CFAP53Q96M91 514 aa9.46□□□□□ -0.9
PSMB3-212ENST00000620309 MTFR1LQ9H019 292 aa9.46□□□□□ -0.9
PSMB3-212ENST00000620309 MEGF6O75095 1541 aa9.46□□□□□ -0.9
PSMB3-212ENST00000620309 EXOC5O00471 708 aa9.45□□□□□ -0.9
PSMB3-212ENST00000620309 IL13P35225 146 aa9.45□□□□□ -0.9
PSMB3-212ENST00000620309 SLC15A2Q16348 729 aa9.45□□□□□ -0.9
PSMB3-212ENST00000620309 PNISRQ8TF01 805 aaKnown RBP9.45□□□□□ -0.9
PSMB3-212ENST00000620309 RAPGEF4Q8WZA2 1011 aa9.45□□□□□ -0.9
PSMB3-212ENST00000620309 BCL11BQ9C0K0 894 aaPredicted RBP9.45□□□□□ -0.9
PSMB3-212ENST00000620309 BTAF1O14981 1849 aa9.43□□□□□ -0.9
PSMB3-212ENST00000620309 DIAPH1O60610 1272 aaKnown RBP9.43□□□□□ -0.9
PSMB3-212ENST00000620309 TATP17735 454 aaPredicted RBP9.43□□□□□ -0.9
PSMB3-212ENST00000620309 ARXQ96QS3 562 aa9.43□□□□□ -0.9
PSMB3-212ENST00000620309 TUBGCP6Q96RT7 1819 aa9.42□□□□□ -0.9
PSMB3-212ENST00000620309 KDM3BQ7LBC6 1761 aa9.42□□□□□ -0.9
PSMB3-212ENST00000620309 ITGB4P16144 1822 aa9.42□□□□□ -0.9
PSMB3-212ENST00000620309 ADCY9O60503 1353 aa9.41□□□□□ -0.9
PSMB3-212ENST00000620309 PCDH11XQ9BZA7 1347 aa9.41□□□□□ -0.9
PSMB3-212ENST00000620309 PCDH11YQ9BZA8 1340 aa9.41□□□□□ -0.9
PSMB3-212ENST00000620309 HSPA6P17066 643 aa9.41□□□□□ -0.9
PSMB3-212ENST00000620309 TXNRD1Q16881 649 aa9.41□□□□□ -0.9
PSMB3-212ENST00000620309 STK32BQ9NY57 414 aa9.41□□□□□ -0.9
PSMB3-212ENST00000620309 MRC1P22897 1456 aa9.4□□□□□ -0.9
PSMB3-212ENST00000620309 UBR2Q8IWV8 1755 aa9.4□□□□□ -0.9
PSMB3-212ENST00000620309 PCNTO95613 3336 aa9.4□□□□□ -0.9
PSMB3-212ENST00000620309 WDR43Q15061 677 aaKnown RBP eCLIP9.4□□□□□ -0.9
PSMB3-212ENST00000620309 AEBP1Q8IUX7 1158 aa9.4□□□□□ -0.9
PSMB3-212ENST00000620309 MARCH10Q8NA82 808 aaPredicted RBP9.4□□□□□ -0.9
PSMB3-212ENST00000620309 EYA1Q99502 592 aa9.4□□□□□ -0.9
PSMB3-212ENST00000620309 RSPH6AQ9H0K4 717 aa9.4□□□□□ -0.9
PSMB3-212ENST00000620309 SPG7Q9UQ90 795 aa9.4□□□□□ -0.9
PSMB3-212ENST00000620309 ATP10DQ9P241 1426 aa9.39□□□□□ -0.91
PSMB3-212ENST00000620309 U2SURPO15042 1029 aaKnown RBP9.39□□□□□ -0.91
PSMB3-212ENST00000620309 NBPF6Q5VWK0 638 aa9.39□□□□□ -0.91
PSMB3-212ENST00000620309 ZCRB1Q8TBF4 217 aaKnown RBP9.39□□□□□ -0.91
PSMB3-212ENST00000620309 NBPF4Q96M43 638 aa9.39□□□□□ -0.91
PSMB3-212ENST00000620309 NUDCQ9Y266 331 aa9.39□□□□□ -0.91
PSMB3-212ENST00000620309 NEFMP07197 916 aa9.38□□□□□ -0.91
PSMB3-212ENST00000620309 U2AF1L5P0DN76 240 aaPredicted RBP9.38□□□□□ -0.91
PSMB3-212ENST00000620309 HMGB2P26583 209 aaKnown RBP9.38□□□□□ -0.91
PSMB3-212ENST00000620309 U2AF1Q01081 240 aaKnown RBP eCLIP9.38□□□□□ -0.91
PSMB3-212ENST00000620309 GPR162Q16538 588 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms