RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 CLUAP1Q96AJ1 413 aa16.32■□□□□ 0.2
TNFAIP3-209ENST00000619035 TNNQ9UQP3 1299 aa16.32■□□□□ 0.2
TNFAIP3-209ENST00000619035 NCAPD2Q15021 1401 aa16.32■□□□□ 0.2
TNFAIP3-209ENST00000619035 HTATSF1O43719 755 aaKnown RBP16.31■□□□□ 0.2
TNFAIP3-209ENST00000619035 PDE3AQ14432 1141 aa16.31■□□□□ 0.2
TNFAIP3-209ENST00000619035 TSPYL6Q8N831 410 aa16.31■□□□□ 0.2
TNFAIP3-209ENST00000619035 COG6Q9Y2V7 657 aa16.31■□□□□ 0.2
TNFAIP3-209ENST00000619035 CPDO75976 1380 aa16.31■□□□□ 0.2
TNFAIP3-209ENST00000619035 ZNF428Q96B54 188 aa16.3■□□□□ 0.2
TNFAIP3-209ENST00000619035 CAMTA1Q9Y6Y1 1673 aa16.3■□□□□ 0.2
TNFAIP3-209ENST00000619035 GNAT3A8MTJ3 354 aa16.3■□□□□ 0.2
TNFAIP3-209ENST00000619035 CHRNA2Q15822 529 aa16.3■□□□□ 0.2
TNFAIP3-209ENST00000619035 TWISTNBQ3B726 338 aaPredicted RBP16.29■□□□□ 0.2
TNFAIP3-209ENST00000619035 ZKSCAN2Q63HK3 967 aa16.29■□□□□ 0.2
TNFAIP3-209ENST00000619035 RGPD5Q99666 1765 aa16.29■□□□□ 0.2
TNFAIP3-209ENST00000619035 MAP3K5Q99683 1374 aa16.29■□□□□ 0.2
TNFAIP3-209ENST00000619035 ERBB3P21860 1342 aa16.29■□□□□ 0.2
TNFAIP3-209ENST00000619035 RLBP1P12271 317 aa16.29■□□□□ 0.2
TNFAIP3-209ENST00000619035 C8orf58Q8NAV2 365 aa16.29■□□□□ 0.2
TNFAIP3-209ENST00000619035 MIS18AQ9NYP9 233 aa16.29■□□□□ 0.2
TNFAIP3-209ENST00000619035 CRB1P82279 1406 aa16.28■□□□□ 0.2
TNFAIP3-209ENST00000619035 PLEKHG2Q9H7P9 1386 aa16.28■□□□□ 0.2
TNFAIP3-209ENST00000619035 VAMP4O75379 141 aa16.28■□□□□ 0.2
TNFAIP3-209ENST00000619035 HAP1P54257 671 aaPredicted RBP16.28■□□□□ 0.2
TNFAIP3-209ENST00000619035 FTSJ3Q8IY81 847 aaKnown RBP16.28■□□□□ 0.2
TNFAIP3-209ENST00000619035 COL18A1P39060 1754 aa16.28■□□□□ 0.2
TNFAIP3-209ENST00000619035 KIAA0232Q92628 1395 aa16.28■□□□□ 0.2
TNFAIP3-209ENST00000619035 CHL1O00533 1208 aa16.28■□□□□ 0.2
TNFAIP3-209ENST00000619035 TCERG1O14776 1098 aaKnown RBP16.28■□□□□ 0.2
TNFAIP3-209ENST00000619035 NOB1Q9ULX3 412 aaKnown RBP16.28■□□□□ 0.2
TNFAIP3-209ENST00000619035 FAM208AQ9UK61 1670 aaKnown RBP16.27■□□□□ 0.2
TNFAIP3-209ENST00000619035 ALDH1L2Q3SY69 923 aa16.27■□□□□ 0.2
TNFAIP3-209ENST00000619035 CSB-PGBD3P0DP91 1061 aa16.26■□□□□ 0.19
TNFAIP3-209ENST00000619035 KRT24Q2M2I5 525 aa16.26■□□□□ 0.19
TNFAIP3-209ENST00000619035 NLRP2Q9NX02 1062 aa16.26■□□□□ 0.19
TNFAIP3-209ENST00000619035 KIF16BQ96L93 1317 aa16.26■□□□□ 0.19
TNFAIP3-209ENST00000619035 TSPYL4Q9UJ04 414 aa16.26■□□□□ 0.19
TNFAIP3-209ENST00000619035 LMO7Q8WWI1 1683 aa16.25■□□□□ 0.19
TNFAIP3-209ENST00000619035 TRIM27P14373 513 aa16.25■□□□□ 0.19
TNFAIP3-209ENST00000619035 DZIP1LQ8IYY4 767 aaKnown RBP16.25■□□□□ 0.19
TNFAIP3-209ENST00000619035 AHDC1Q5TGY3 1603 aaPredicted RBP16.25■□□□□ 0.19
TNFAIP3-209ENST00000619035 AMOTQ4VCS5 1084 aa16.24■□□□□ 0.19
TNFAIP3-209ENST00000619035 PLEKHO1Q53GL0 409 aaPredicted RBP16.24■□□□□ 0.19
TNFAIP3-209ENST00000619035 ZNF530Q6P9A1 599 aaPredicted RBP16.24■□□□□ 0.19
TNFAIP3-209ENST00000619035 ATF7IPQ6VMQ6 1270 aa16.24■□□□□ 0.19
TNFAIP3-209ENST00000619035 IL17REQ8NFR9 667 aa16.24■□□□□ 0.19
TNFAIP3-209ENST00000619035 IPO8O15397 1037 aaKnown RBP16.23■□□□□ 0.19
TNFAIP3-209ENST00000619035 PRDM11Q9NQV5 511 aa16.23■□□□□ 0.19
TNFAIP3-209ENST00000619035 ROBO1Q9Y6N7 1651 aa16.23■□□□□ 0.19
TNFAIP3-209ENST00000619035 MS4A1P11836 297 aa16.22■□□□□ 0.19
TNFAIP3-209ENST00000619035 BABAM1Q9NWV8 329 aa16.22■□□□□ 0.19
TNFAIP3-209ENST00000619035 ABCA3Q99758 1704 aa16.22■□□□□ 0.19
TNFAIP3-209ENST00000619035 MRPL50Q8N5N7 158 aaKnown RBP16.22■□□□□ 0.19
TNFAIP3-209ENST00000619035 LRRC37A3O60309 1634 aa16.22■□□□□ 0.19
TNFAIP3-209ENST00000619035 KDM2BQ8NHM5 1336 aa16.22■□□□□ 0.19
TNFAIP3-209ENST00000619035 MSH5O43196 834 aa16.21■□□□□ 0.19
TNFAIP3-209ENST00000619035 BRPF1P55201 1214 aaPredicted RBP16.21■□□□□ 0.19
TNFAIP3-209ENST00000619035 MVPQ14764 893 aaKnown RBP16.21■□□□□ 0.19
TNFAIP3-209ENST00000619035 C1orf141Q5JVX7 400 aa16.21■□□□□ 0.19
TNFAIP3-209ENST00000619035 ITPRIPQ8IWB1 547 aa16.21■□□□□ 0.19
TNFAIP3-209ENST00000619035 RAPGEF4Q8WZA2 1011 aa16.21■□□□□ 0.19
TNFAIP3-209ENST00000619035 AKAP4Q5JQC9 854 aa16.2■□□□□ 0.18
TNFAIP3-209ENST00000619035 MPRIPQ6WCQ1 1025 aa16.2■□□□□ 0.18
TNFAIP3-209ENST00000619035 LGR6Q9HBX8 967 aa16.2■□□□□ 0.18
TNFAIP3-209ENST00000619035 AAMPQ13685 434 aa16.19■□□□□ 0.18
TNFAIP3-209ENST00000619035 TAF7Q15545 349 aaPredicted RBP16.19■□□□□ 0.18
TNFAIP3-209ENST00000619035 TMEM57Q8N5G2 664 aa16.19■□□□□ 0.18
TNFAIP3-209ENST00000619035 CENPQQ7L2Z9 268 aaPredicted RBP16.18■□□□□ 0.18
TNFAIP3-209ENST00000619035 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.18■□□□□ 0.189e-7■■■□□ 15.3
TNFAIP3-209ENST00000619035 COL22A1Q8NFW1 1626 aaPredicted RBP16.18■□□□□ 0.18
TNFAIP3-209ENST00000619035 OVOS2A0A0G2JMS6 1433 aa16.18■□□□□ 0.18
TNFAIP3-209ENST00000619035 TATP17735 454 aaPredicted RBP16.17■□□□□ 0.18
TNFAIP3-209ENST00000619035 CEMIPQ8WUJ3 1361 aa16.17■□□□□ 0.18
TNFAIP3-209ENST00000619035 TOM1O60784 492 aa16.17■□□□□ 0.18
TNFAIP3-209ENST00000619035 TEFQ10587 303 aa16.17■□□□□ 0.18
TNFAIP3-209ENST00000619035 SOS1Q07889 1333 aaPredicted RBP16.16■□□□□ 0.18
TNFAIP3-209ENST00000619035 IGHDP01880 384 aa16.16■□□□□ 0.18
TNFAIP3-209ENST00000619035 DDX19BQ9UMR2 479 aa16.16■□□□□ 0.18
TNFAIP3-209ENST00000619035 MEGF6O75095 1541 aa16.16■□□□□ 0.18
TNFAIP3-209ENST00000619035 WDR17Q8IZU2 1322 aa16.15■□□□□ 0.18
TNFAIP3-209ENST00000619035 TOM1L2Q6ZVM7 507 aa16.15■□□□□ 0.18
TNFAIP3-209ENST00000619035 STRN4Q9NRL3 753 aa16.15■□□□□ 0.18
TNFAIP3-209ENST00000619035 RNMTO43148 476 aaKnown RBP16.14■□□□□ 0.17
TNFAIP3-209ENST00000619035 ARHGAP45Q92619 1136 aa16.14■□□□□ 0.17
TNFAIP3-209ENST00000619035 PDE4AP27815 886 aa16.14■□□□□ 0.17
TNFAIP3-209ENST00000619035 NECTIN2Q92692 538 aa16.14■□□□□ 0.17
TNFAIP3-209ENST00000619035 PCDHB15Q9Y5E8 787 aa16.14■□□□□ 0.17
TNFAIP3-209ENST00000619035 SLC4A2P04920 1241 aa16.13■□□□□ 0.17
TNFAIP3-209ENST00000619035 SPG7Q9UQ90 795 aa16.13■□□□□ 0.17
TNFAIP3-209ENST00000619035 COL5A2P05997 1499 aaPredicted RBP16.13■□□□□ 0.17
TNFAIP3-209ENST00000619035 BTBD11A6QL63 1104 aa16.12■□□□□ 0.17
TNFAIP3-209ENST00000619035 API5Q9BZZ5 524 aaKnown RBP16.12■□□□□ 0.17
TNFAIP3-209ENST00000619035 ADAMTS7Q9UKP4 1686 aa16.12■□□□□ 0.17
TNFAIP3-209ENST00000619035 EVA1CP58658 441 aa16.12■□□□□ 0.17
TNFAIP3-209ENST00000619035 RGS3P49796 1198 aa16.11■□□□□ 0.17
TNFAIP3-209ENST00000619035 PIP4K2BP78356 416 aa16.11■□□□□ 0.17
TNFAIP3-209ENST00000619035 PHLPP1O60346 1717 aa16.11■□□□□ 0.17
TNFAIP3-209ENST00000619035 ABCC4O15439 1325 aa16.11■□□□□ 0.17
TNFAIP3-209ENST00000619035 STK31Q9BXU1 1019 aa16.11■□□□□ 0.17
TNFAIP3-209ENST00000619035 PKD1L3Q7Z443 1732 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms