RNA–Protein interactions for RNA: ENST00000617626.1

U1.41-201, humanhuman

BASIC

Gene U1, Length 165 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.41-201ENST00000617626 WNK3Q9BYP7 1800 aa8.74□□□□□ -1.01
U1.41-201ENST00000617626 COL3A1P02461 1466 aaPredicted RBP8.74□□□□□ -1.01
U1.41-201ENST00000617626 CCER2I3L3R5 266 aa8.73□□□□□ -1.01
U1.41-201ENST00000617626 U2AF1L5P0DN76 240 aaPredicted RBP8.73□□□□□ -1.01
U1.41-201ENST00000617626 IL2RBP14784 551 aa8.73□□□□□ -1.01
U1.41-201ENST00000617626 U2AF1Q01081 240 aaKnown RBP eCLIP8.73□□□□□ -1.01
U1.41-201ENST00000617626 FAM98CQ17RN3 349 aaKnown RBP8.73□□□□□ -1.01
U1.41-201ENST00000617626 SULT6B1Q6IMI4 303 aa8.73□□□□□ -1.01
U1.41-201ENST00000617626 BARGINQ6ZT62 677 aa8.73□□□□□ -1.01
U1.41-201ENST00000617626 USHBP1Q8N6Y0 703 aa8.73□□□□□ -1.01
U1.41-201ENST00000617626 UBE2Q2Q8WVN8 375 aa8.73□□□□□ -1.01
U1.41-201ENST00000617626 RGPD1P0DJD0 1748 aa8.73□□□□□ -1.01
U1.41-201ENST00000617626 IGSF1Q8N6C5 1336 aa8.73□□□□□ -1.01
U1.41-201ENST00000617626 FANCIQ9NVI1 1328 aa8.72□□□□□ -1.01
U1.41-201ENST00000617626 PLEKHG2Q9H7P9 1386 aa8.72□□□□□ -1.01
U1.41-201ENST00000617626 EXOC5O00471 708 aa8.71□□□□□ -1.02
U1.41-201ENST00000617626 FCHSD2O94868 740 aa8.71□□□□□ -1.02
U1.41-201ENST00000617626 HMOX1P09601 288 aa8.71□□□□□ -1.02
U1.41-201ENST00000617626 PDE3BQ13370 1112 aa8.71□□□□□ -1.02
U1.41-201ENST00000617626 DDB1Q16531 1140 aa8.71□□□□□ -1.02
U1.41-201ENST00000617626 MIER1Q8N108 512 aa8.71□□□□□ -1.02
U1.41-201ENST00000617626 SPG7Q9UQ90 795 aa8.71□□□□□ -1.02
U1.41-201ENST00000617626 MAPK8IP3Q9UPT6 1336 aa8.71□□□□□ -1.02
U1.41-201ENST00000617626 NCAPD2Q15021 1401 aa8.71□□□□□ -1.02
U1.41-201ENST00000617626 AMOTQ4VCS5 1084 aa8.7□□□□□ -1.02
U1.41-201ENST00000617626 PLEKHO1Q53GL0 409 aaPredicted RBP8.7□□□□□ -1.02
U1.41-201ENST00000617626 FAM182BQ5T319 152 aa8.7□□□□□ -1.02
U1.41-201ENST00000617626 SEPT12Q8IYM1 358 aa8.7□□□□□ -1.02
U1.41-201ENST00000617626 KDRP35968 1356 aa8.7□□□□□ -1.02
U1.41-201ENST00000617626 THSD7AQ9UPZ6 1657 aa8.69□□□□□ -1.02
U1.41-201ENST00000617626 ONECUT3O60422 494 aaPredicted RBP8.69□□□□□ -1.02
U1.41-201ENST00000617626 AEBP1Q8IUX7 1158 aa8.69□□□□□ -1.02
U1.41-201ENST00000617626 ZCRB1Q8TBF4 217 aaKnown RBP8.69□□□□□ -1.02
U1.41-201ENST00000617626 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.69□□□□□ -1.02
U1.41-201ENST00000617626 OVOS2A0A0G2JMS6 1433 aa8.69□□□□□ -1.02
U1.41-201ENST00000617626 DISP2A7MBM2 1401 aa8.69□□□□□ -1.02
U1.41-201ENST00000617626 TNS2Q63HR2 1409 aa8.69□□□□□ -1.02
U1.41-201ENST00000617626 MEGF6O75095 1541 aa8.69□□□□□ -1.02
U1.41-201ENST00000617626 LRRC37A3O60309 1634 aa8.69□□□□□ -1.02
U1.41-201ENST00000617626 PRKAR2BP31323 418 aa8.68□□□□□ -1.02
U1.41-201ENST00000617626 C1orf141Q5JVX7 400 aa8.68□□□□□ -1.02
U1.41-201ENST00000617626 KRT27Q7Z3Y8 459 aa8.68□□□□□ -1.02
U1.41-201ENST00000617626 FAM9BQ8IZU0 186 aa8.68□□□□□ -1.02
U1.41-201ENST00000617626 GAS2L2Q8NHY3 880 aa8.68□□□□□ -1.02
U1.41-201ENST00000617626 RSPH6AQ9H0K4 717 aa8.68□□□□□ -1.02
U1.41-201ENST00000617626 PCDH11XQ9BZA7 1347 aa8.68□□□□□ -1.02
U1.41-201ENST00000617626 PCDH11YQ9BZA8 1340 aa8.68□□□□□ -1.02
U1.41-201ENST00000617626 PKD1L3Q7Z443 1732 aa8.68□□□□□ -1.02
U1.41-201ENST00000617626 HSP90AB1P08238 724 aaKnown RBP8.67□□□□□ -1.02
U1.41-201ENST00000617626 CCDC184Q52MB2 194 aa8.67□□□□□ -1.02
U1.41-201ENST00000617626 ZNF530Q6P9A1 599 aaPredicted RBP8.67□□□□□ -1.02
U1.41-201ENST00000617626 IFNL2Q8IZJ0 200 aa8.67□□□□□ -1.02
U1.41-201ENST00000617626 DDX54Q8TDD1 881 aaKnown RBP8.67□□□□□ -1.02
U1.41-201ENST00000617626 PNISRQ8TF01 805 aaKnown RBP8.67□□□□□ -1.02
U1.41-201ENST00000617626 RUNDC1Q96C34 613 aa8.67□□□□□ -1.02
U1.41-201ENST00000617626 ADAMTS8Q9UP79 889 aa8.67□□□□□ -1.02
U1.41-201ENST00000617626 TNS1Q9HBL0 1735 aaKnown RBP8.66□□□□□ -1.02
U1.41-201ENST00000617626 CCDC125Q86Z20 511 aa8.66□□□□□ -1.02
U1.41-201ENST00000617626 RBM19Q9Y4C8 960 aaKnown RBP8.66□□□□□ -1.02
U1.41-201ENST00000617626 EIF5BO60841 1220 aaKnown RBP8.65□□□□□ -1.02
U1.41-201ENST00000617626 EN1Q05925 392 aaPredicted RBP8.65□□□□□ -1.02
U1.41-201ENST00000617626 LMOD3Q0VAK6 560 aa8.65□□□□□ -1.02
U1.41-201ENST00000617626 AKAP4Q5JQC9 854 aa8.65□□□□□ -1.02
U1.41-201ENST00000617626 FAM196AQ6ZSG2 479 aa8.65□□□□□ -1.02
U1.41-201ENST00000617626 CCDC146Q8IYE0 955 aa8.65□□□□□ -1.02
U1.41-201ENST00000617626 RTF1Q92541 710 aaKnown RBP8.65□□□□□ -1.02
U1.41-201ENST00000617626 SHANK3Q9BYB0 1731 aa8.65□□□□□ -1.03
U1.41-201ENST00000617626 NFE2L2Q16236 605 aa8.64□□□□□ -1.03
U1.41-201ENST00000617626 MTHFSDQ2M296 383 aaKnown RBP8.64□□□□□ -1.03
U1.41-201ENST00000617626 DAXXQ9UER7 740 aaPredicted RBP8.64□□□□□ -1.03
U1.41-201ENST00000617626 GNAT3A8MTJ3 354 aa8.63□□□□□ -1.03
U1.41-201ENST00000617626 PHKG2P15735 406 aa8.63□□□□□ -1.03
U1.41-201ENST00000617626 DEKP35659 375 aaKnown RBP8.63□□□□□ -1.03
U1.41-201ENST00000617626 R3HDM1Q15032 1099 aaKnown RBP8.63□□□□□ -1.03
U1.41-201ENST00000617626 GLIPR1L2Q4G1C9 344 aa8.63□□□□□ -1.03
U1.41-201ENST00000617626 MARCH10Q8NA82 808 aaPredicted RBP8.63□□□□□ -1.03
U1.41-201ENST00000617626 DCAF5Q96JK2 942 aa8.63□□□□□ -1.03
U1.41-201ENST00000617626 PHACTR3Q96KR7 559 aa8.63□□□□□ -1.03
U1.41-201ENST00000617626 PLEKHF1Q96S99 279 aa8.63□□□□□ -1.03
U1.41-201ENST00000617626 VIRMAQ69YN4 1812 aaKnown RBP8.63□□□□□ -1.03
U1.41-201ENST00000617626 DLG5Q8TDM6 1919 aa8.62□□□□□ -1.03
U1.41-201ENST00000617626 MAP3K5Q99683 1374 aa8.62□□□□□ -1.03
U1.41-201ENST00000617626 CYP27B1O15528 508 aa8.62□□□□□ -1.03
U1.41-201ENST00000617626 HTATSF1O43719 755 aaKnown RBP8.62□□□□□ -1.03
U1.41-201ENST00000617626 RIPK4P57078 832 aa8.62□□□□□ -1.03
U1.41-201ENST00000617626 RTL5Q5HYW3 569 aaPredicted RBP8.62□□□□□ -1.03
U1.41-201ENST00000617626 NGEFQ8N5V2 710 aa8.62□□□□□ -1.03
U1.41-201ENST00000617626 KAT6BQ8WYB5 2073 aa8.61□□□□□ -1.03
U1.41-201ENST00000617626 SCN11AQ9UI33 1791 aa8.61□□□□□ -1.03
U1.41-201ENST00000617626 DOT1LQ8TEK3 1739 aa8.61□□□□□ -1.03
U1.41-201ENST00000617626 APAF1O14727 1248 aa8.61□□□□□ -1.03
U1.41-201ENST00000617626 TMPOP42166 694 aaKnown RBP8.61□□□□□ -1.03
U1.41-201ENST00000617626 TEFQ10587 303 aa8.61□□□□□ -1.03
U1.41-201ENST00000617626 SF3B2Q13435 895 aaKnown RBP8.61□□□□□ -1.03
U1.41-201ENST00000617626 NKX1-1Q15270 411 aaPredicted RBP8.61□□□□□ -1.03
U1.41-201ENST00000617626 NEUROD2Q15784 382 aa8.61□□□□□ -1.03
U1.41-201ENST00000617626 EZH2Q15910 746 aaKnown RBP8.61□□□□□ -1.03
U1.41-201ENST00000617626 MPRIPQ6WCQ1 1025 aa8.61□□□□□ -1.03
U1.41-201ENST00000617626 SYTL4Q96C24 671 aaPredicted RBP8.61□□□□□ -1.03
U1.41-201ENST00000617626 BCL9O00512 1426 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms