RNA–Protein interactions for RNA: ENST00000617024.1

SPTSSB-204, Transcript of serine palmitoyltransferase small subunit B, humanhuman

BASIC

Gene SPTSSB, Length 1,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-204ENST00000617024 USHBP1Q8N6Y0 703 aa21.97■■□□□ 1.11
SPTSSB-204ENST00000617024 NUDCQ9Y266 331 aa21.97■■□□□ 1.11
SPTSSB-204ENST00000617024 FAM208AQ9UK61 1670 aaKnown RBP21.96■■□□□ 1.11
SPTSSB-204ENST00000617024 CDCA7Q9BWT1 371 aaPredicted RBP21.96■■□□□ 1.11
SPTSSB-204ENST00000617024 RGPD2P0DJD1 1756 aa21.94■■□□□ 1.1
SPTSSB-204ENST00000617024 IL2RBP14784 551 aa21.94■■□□□ 1.1
SPTSSB-204ENST00000617024 U2SURPO15042 1029 aaKnown RBP21.93■■□□□ 1.1
SPTSSB-204ENST00000617024 PARP4Q9UKK3 1724 aaKnown RBP21.92■■□□□ 1.1
SPTSSB-204ENST00000617024 IGSF1Q8N6C5 1336 aa21.92■■□□□ 1.1
SPTSSB-204ENST00000617024 RAPGEF4Q8WZA2 1011 aa21.92■■□□□ 1.1
SPTSSB-204ENST00000617024 COL3A1P02461 1466 aaPredicted RBP21.91■■□□□ 1.1
SPTSSB-204ENST00000617024 PDE3BQ13370 1112 aa21.91■■□□□ 1.1
SPTSSB-204ENST00000617024 SULT6B1Q6IMI4 303 aa21.91■■□□□ 1.1
SPTSSB-204ENST00000617024 EXOC5O00471 708 aa21.9■■□□□ 1.1
SPTSSB-204ENST00000617024 TATP17735 454 aaPredicted RBP21.9■■□□□ 1.1
SPTSSB-204ENST00000617024 SBF2Q86WG5 1849 aa21.9■■□□□ 1.1
SPTSSB-204ENST00000617024 DDB1Q16531 1140 aa21.89■■□□□ 1.09
SPTSSB-204ENST00000617024 U2AF1L5P0DN76 240 aaPredicted RBP21.88■■□□□ 1.09
SPTSSB-204ENST00000617024 U2AF1Q01081 240 aaKnown RBP eCLIP21.88■■□□□ 1.09
SPTSSB-204ENST00000617024 NBPF14Q5TI25 921 aa21.88■■□□□ 1.09
SPTSSB-204ENST00000617024 CASZ1Q86V15 1759 aa21.87■■□□□ 1.09
SPTSSB-204ENST00000617024 HMOX1P09601 288 aa21.87■■□□□ 1.09
SPTSSB-204ENST00000617024 AEBP1Q8IUX7 1158 aa21.87■■□□□ 1.09
SPTSSB-204ENST00000617024 NCAPD2Q15021 1401 aa21.87■■□□□ 1.09
SPTSSB-204ENST00000617024 RGPD3A6NKT7 1758 aaPredicted RBP21.87■■□□□ 1.09
SPTSSB-204ENST00000617024 RGPD4Q7Z3J3 1758 aa21.87■■□□□ 1.09
SPTSSB-204ENST00000617024 KCNQ2O43526 872 aa21.86■■□□□ 1.09
SPTSSB-204ENST00000617024 SPON1Q9HCB6 807 aa21.86■■□□□ 1.09
SPTSSB-204ENST00000617024 ZCRB1Q8TBF4 217 aaKnown RBP21.85■■□□□ 1.09
SPTSSB-204ENST00000617024 PPP1R1BQ9UD71 204 aaPredicted RBP21.84■■□□□ 1.09
SPTSSB-204ENST00000617024 FCHSD2O94868 740 aa21.83■■□□□ 1.09
SPTSSB-204ENST00000617024 WDR43Q15061 677 aaKnown RBP eCLIP21.83■■□□□ 1.09
SPTSSB-204ENST00000617024 CCDC184Q52MB2 194 aa21.83■■□□□ 1.09
SPTSSB-204ENST00000617024 MRS2Q9HD23 443 aa21.83■■□□□ 1.09
SPTSSB-204ENST00000617024 SPG7Q9UQ90 795 aa21.83■■□□□ 1.09
SPTSSB-204ENST00000617024 LRRC37A3O60309 1634 aa21.83■■□□□ 1.08
SPTSSB-204ENST00000617024 KDRP35968 1356 aa21.83■■□□□ 1.08
SPTSSB-204ENST00000617024 PLEKHO1Q53GL0 409 aaPredicted RBP21.82■■□□□ 1.08
SPTSSB-204ENST00000617024 ANO8Q9HCE9 1232 aaPredicted RBP21.82■■□□□ 1.08
SPTSSB-204ENST00000617024 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.82■■□□□ 1.08
SPTSSB-204ENST00000617024 MEGF6O75095 1541 aa21.81■■□□□ 1.08
SPTSSB-204ENST00000617024 DDX54Q8TDD1 881 aaKnown RBP21.81■■□□□ 1.08
SPTSSB-204ENST00000617024 PNNQ9H307 717 aaKnown RBP21.81■■□□□ 1.08
SPTSSB-204ENST00000617024 OVOS2A0A0G2JMS6 1433 aa21.8■■□□□ 1.08
SPTSSB-204ENST00000617024 WNK3Q9BYP7 1800 aa21.8■■□□□ 1.08
SPTSSB-204ENST00000617024 AMOTQ4VCS5 1084 aa21.8■■□□□ 1.08
SPTSSB-204ENST00000617024 PTF1AQ7RTS3 328 aa21.8■■□□□ 1.08
SPTSSB-204ENST00000617024 RSPH6AQ9H0K4 717 aa21.8■■□□□ 1.08
SPTSSB-204ENST00000617024 PDGFDQ9GZP0 370 aaPredicted RBP21.79■■□□□ 1.08
SPTSSB-204ENST00000617024 PRKAR2BP31323 418 aa21.78■■□□□ 1.08
SPTSSB-204ENST00000617024 MIER1Q8N108 512 aa21.78■■□□□ 1.08
SPTSSB-204ENST00000617024 MARCH10Q8NA82 808 aaPredicted RBP21.78■■□□□ 1.08
SPTSSB-204ENST00000617024 PLEKHG2Q9H7P9 1386 aa21.77■■□□□ 1.08
SPTSSB-204ENST00000617024 ADAMTS8Q9UP79 889 aa21.77■■□□□ 1.08
SPTSSB-204ENST00000617024 TNS2Q63HR2 1409 aa21.77■■□□□ 1.08
SPTSSB-204ENST00000617024 CCER2I3L3R5 266 aa21.76■■□□□ 1.07
SPTSSB-204ENST00000617024 NEFMP07197 916 aa21.76■■□□□ 1.07
SPTSSB-204ENST00000617024 PCDH11XQ9BZA7 1347 aa21.76■■□□□ 1.07
SPTSSB-204ENST00000617024 PCDH11YQ9BZA8 1340 aa21.76■■□□□ 1.07
SPTSSB-204ENST00000617024 PLSCR1O15162 318 aa21.75■■□□□ 1.07
SPTSSB-204ENST00000617024 PNISRQ8TF01 805 aaKnown RBP21.75■■□□□ 1.07
SPTSSB-204ENST00000617024 IFNL2Q8IZJ0 200 aa21.74■■□□□ 1.07
SPTSSB-204ENST00000617024 PROM2Q8N271 834 aa21.74■■□□□ 1.07
SPTSSB-204ENST00000617024 CYP27B1O15528 508 aa21.73■■□□□ 1.07
SPTSSB-204ENST00000617024 ZNF530Q6P9A1 599 aaPredicted RBP21.73■■□□□ 1.07
SPTSSB-204ENST00000617024 PHACTR3Q96KR7 559 aa21.73■■□□□ 1.07
SPTSSB-204ENST00000617024 MTHFSDQ2M296 383 aaKnown RBP21.72■■□□□ 1.07
SPTSSB-204ENST00000617024 PLEKHF1Q96S99 279 aa21.72■■□□□ 1.07
SPTSSB-204ENST00000617024 DCAF8L1A6NGE4 600 aa21.71■■□□□ 1.07
SPTSSB-204ENST00000617024 PHKG2P15735 406 aa21.71■■□□□ 1.07
SPTSSB-204ENST00000617024 PTGER2P43116 358 aa21.71■■□□□ 1.07
SPTSSB-204ENST00000617024 C1orf141Q5JVX7 400 aa21.71■■□□□ 1.07
SPTSSB-204ENST00000617024 GAS2L2Q8NHY3 880 aa21.71■■□□□ 1.07
SPTSSB-204ENST00000617024 ZBTB7AO95365 584 aa21.7■■□□□ 1.06
SPTSSB-204ENST00000617024 BCL11BQ9C0K0 894 aaPredicted RBP21.7■■□□□ 1.06
SPTSSB-204ENST00000617024 MAPK8IP3Q9UPT6 1336 aa21.7■■□□□ 1.06
SPTSSB-204ENST00000617024 PKD1L3Q7Z443 1732 aa21.69■■□□□ 1.06
SPTSSB-204ENST00000617024 HSP90AB1P08238 724 aaKnown RBP21.69■■□□□ 1.06
SPTSSB-204ENST00000617024 NKX1-1Q15270 411 aaPredicted RBP21.69■■□□□ 1.06
SPTSSB-204ENST00000617024 AKAP4Q5JQC9 854 aa21.69■■□□□ 1.06
SPTSSB-204ENST00000617024 RUNDC1Q96C34 613 aa21.69■■□□□ 1.06
SPTSSB-204ENST00000617024 GOLGB1Q14789 3259 aaKnown RBP21.68■■□□□ 1.06
SPTSSB-204ENST00000617024 CCDC146Q8IYE0 955 aa21.68■■□□□ 1.06
SPTSSB-204ENST00000617024 FAM9BQ8IZU0 186 aa21.68■■□□□ 1.06
SPTSSB-204ENST00000617024 CHD4Q14839 1912 aa21.67■■□□□ 1.06
SPTSSB-204ENST00000617024 ZNF784Q8NCA9 323 aaPredicted RBP21.67■■□□□ 1.06
SPTSSB-204ENST00000617024 BCL9O00512 1426 aa21.66■■□□□ 1.06
SPTSSB-204ENST00000617024 SHANK3Q9BYB0 1731 aa21.66■■□□□ 1.06
SPTSSB-204ENST00000617024 ACSBG1Q96GR2 724 aa21.65■■□□□ 1.06
SPTSSB-204ENST00000617024 ATF5Q9Y2D1 282 aaPredicted RBP21.65■■□□□ 1.06
SPTSSB-204ENST00000617024 GNAT3A8MTJ3 354 aa21.64■■□□□ 1.05
SPTSSB-204ENST00000617024 DCAF5Q96JK2 942 aa21.64■■□□□ 1.05
SPTSSB-204ENST00000617024 NFE2L2Q16236 605 aa21.63■■□□□ 1.05
SPTSSB-204ENST00000617024 MPRIPQ6WCQ1 1025 aa21.63■■□□□ 1.05
SPTSSB-204ENST00000617024 KAT6BQ8WYB5 2073 aa21.63■■□□□ 1.05
SPTSSB-204ENST00000617024 PRIM1P49642 420 aaKnown RBP21.62■■□□□ 1.05
SPTSSB-204ENST00000617024 TXNRD1Q16881 649 aa21.61■■□□□ 1.05
SPTSSB-204ENST00000617024 RTF1Q92541 710 aaKnown RBP21.61■■□□□ 1.05
SPTSSB-204ENST00000617024 SYTL4Q96C24 671 aaPredicted RBP21.61■■□□□ 1.05
SPTSSB-204ENST00000617024 SGIP1Q9BQI5 828 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms