RNA–Protein interactions for RNA: ENST00000616577.4

TPT1-214, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 3 BASIC

Gene TPT1, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-214ENST00000616577 FAM177A1Q8N128 213 aaPredicted RBP12.4□□□□□ -0.42
TPT1-214ENST00000616577 RBM42Q9BTD8 480 aaKnown RBP12.4□□□□□ -0.42
TPT1-214ENST00000616577 XPCQ01831 940 aaPredicted RBP12.4□□□□□ -0.42
TPT1-214ENST00000616577 FKBP4Q02790 459 aaKnown RBP eCLIP12.4□□□□□ -0.42
TPT1-214ENST00000616577 PRPF40BQ6NWY9 871 aaKnown RBP12.4□□□□□ -0.42
TPT1-214ENST00000616577 JMYQ8N9B5 988 aa12.4□□□□□ -0.42
TPT1-214ENST00000616577 ACBD3Q9H3P7 528 aa12.4□□□□□ -0.42
TPT1-214ENST00000616577 GDPD2Q9HCC8 539 aa12.4□□□□□ -0.42
TPT1-214ENST00000616577 KIF1BPQ96EK5 621 aa12.4□□□□□ -0.43
TPT1-214ENST00000616577 CNNM1Q9NRU3 951 aa12.4□□□□□ -0.43
TPT1-214ENST00000616577 BTBD11A6QL63 1104 aa12.39□□□□□ -0.43
TPT1-214ENST00000616577 PATL2C9JE40 543 aaKnown RBP12.39□□□□□ -0.43
TPT1-214ENST00000616577 LARP6Q9BRS8 491 aaKnown RBP12.39□□□□□ -0.43
TPT1-214ENST00000616577 BMP2KLQ5H9B9 411 aa12.39□□□□□ -0.43
TPT1-214ENST00000616577 CAGE1Q8TC20 777 aa12.39□□□□□ -0.43
TPT1-214ENST00000616577 MAP3K11Q16584 847 aa12.39□□□□□ -0.43
TPT1-214ENST00000616577 GNAT3A8MTJ3 354 aa12.38□□□□□ -0.43
TPT1-214ENST00000616577 FILIP1LQ4L180 1135 aa12.38□□□□□ -0.43
TPT1-214ENST00000616577 TRIM34Q9BYJ4 488 aa12.38□□□□□ -0.43
TPT1-214ENST00000616577 OFD1O75665 1012 aa12.38□□□□□ -0.43
TPT1-214ENST00000616577 GLRX3O76003 335 aaKnown RBP12.38□□□□□ -0.43
TPT1-214ENST00000616577 CFAP45Q9UL16 551 aa12.38□□□□□ -0.43
TPT1-214ENST00000616577 CEP57L1Q8IYX8 460 aa12.38□□□□□ -0.43
TPT1-214ENST00000616577 PKNOX2Q96KN3 472 aa12.38□□□□□ -0.43
TPT1-214ENST00000616577 SAMD1Q6SPF0 538 aaPredicted RBP12.37□□□□□ -0.43
TPT1-214ENST00000616577 RBM33Q96EV2 1170 aaKnown RBP12.37□□□□□ -0.43
TPT1-214ENST00000616577 CC2D2AQ9P2K1 1620 aa12.37□□□□□ -0.43
TPT1-214ENST00000616577 FBLN1P23142 703 aa12.37□□□□□ -0.43
TPT1-214ENST00000616577 PROSER2Q86WR7 435 aaPredicted RBP12.37□□□□□ -0.43
TPT1-214ENST00000616577 BAG4O95429 457 aaKnown RBP12.37□□□□□ -0.43
TPT1-214ENST00000616577 CABP4P57796 275 aa12.37□□□□□ -0.43
TPT1-214ENST00000616577 TSHZ3Q63HK5 1081 aa12.37□□□□□ -0.43
TPT1-214ENST00000616577 BOLA2Q9H3K6 86 aa12.37□□□□□ -0.43
TPT1-214ENST00000616577 USP25Q9UHP3 1055 aa12.37□□□□□ -0.43
TPT1-214ENST00000616577 C8orf34Q49A92 452 aa12.37□□□□□ -0.43
TPT1-214ENST00000616577 AK7Q96M32 723 aa12.37□□□□□ -0.43
TPT1-214ENST00000616577 CCDC85AQ96PX6 553 aaPredicted RBP12.37□□□□□ -0.43
TPT1-214ENST00000616577 STRN4Q9NRL3 753 aa12.37□□□□□ -0.43
TPT1-214ENST00000616577 LRRFIP2Q9Y608 721 aaKnown RBP12.37□□□□□ -0.43
TPT1-214ENST00000616577 SCAF11Q99590 1463 aaKnown RBP12.36□□□□□ -0.43
TPT1-214ENST00000616577 FAM83GA6ND36 823 aa12.36□□□□□ -0.43
TPT1-214ENST00000616577 CCP110O43303 1012 aa12.36□□□□□ -0.43
TPT1-214ENST00000616577 KRT32Q14532 448 aa12.36□□□□□ -0.43
TPT1-214ENST00000616577 KIF6Q6ZMV9 814 aa12.36□□□□□ -0.43
TPT1-214ENST00000616577 TNNQ9UQP3 1299 aa12.36□□□□□ -0.43
TPT1-214ENST00000616577 TAF7Q15545 349 aaPredicted RBP12.36□□□□□ -0.43
TPT1-214ENST00000616577 CEP126Q9P2H0 1117 aa12.36□□□□□ -0.43
TPT1-214ENST00000616577 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.36□□□□□ -0.43
TPT1-214ENST00000616577 TCEAL9Q9UHQ7 104 aa12.36□□□□□ -0.43
TPT1-214ENST00000616577 RAB11FIP3O75154 756 aa12.35□□□□□ -0.43
TPT1-214ENST00000616577 IDI1Q13907 227 aa12.35□□□□□ -0.43
TPT1-214ENST00000616577 CCDC57Q2TAC2 916 aa12.35□□□□□ -0.43
TPT1-214ENST00000616577 TRIM22Q8IYM9 498 aa12.35□□□□□ -0.43
TPT1-214ENST00000616577 THEMISQ8N1K5 641 aaPredicted RBP12.35□□□□□ -0.43
TPT1-214ENST00000616577 CCDC66A2RUB6 948 aa12.35□□□□□ -0.43
TPT1-214ENST00000616577 USHBP1Q8N6Y0 703 aa12.35□□□□□ -0.43
TPT1-214ENST00000616577 NUP133Q8WUM0 1156 aa12.35□□□□□ -0.43
TPT1-214ENST00000616577 SMARCE1Q969G3 411 aa12.35□□□□□ -0.43
TPT1-214ENST00000616577 RBM27Q9P2N5 1060 aaKnown RBP12.35□□□□□ -0.43
TPT1-214ENST00000616577 CCDC183Q5T5S1 534 aa12.35□□□□□ -0.43
TPT1-214ENST00000616577 MBIPQ9NS73 344 aa12.34□□□□□ -0.43
TPT1-214ENST00000616577 PANK2Q9BZ23 570 aa12.34□□□□□ -0.43
TPT1-214ENST00000616577 SPG7Q9UQ90 795 aa12.34□□□□□ -0.43
TPT1-214ENST00000616577 CCDC8Q9H0W5 538 aaPredicted RBP12.34□□□□□ -0.43
TPT1-214ENST00000616577 TXLNAP40222 546 aa12.34□□□□□ -0.43
TPT1-214ENST00000616577 ZC3H6P61129 1189 aaKnown RBP12.34□□□□□ -0.43
TPT1-214ENST00000616577 SKIDA1Q1XH10 827 aa12.33□□□□□ -0.44
TPT1-214ENST00000616577 PPFIBP1Q86W92 1011 aa12.33□□□□□ -0.44
TPT1-214ENST00000616577 CKAP2LQ8IYA6 745 aa12.33□□□□□ -0.44
TPT1-214ENST00000616577 PDCL2Q8N4E4 241 aa12.33□□□□□ -0.44
TPT1-214ENST00000616577 EPS15P42566 896 aa12.33□□□□□ -0.44
TPT1-214ENST00000616577 LIMCH1Q9UPQ0 1083 aa12.33□□□□□ -0.44
TPT1-214ENST00000616577 XRCC6P12956 609 aaKnown RBP eCLIP12.33□□□□□ -0.44
TPT1-214ENST00000616577 FLIIQ13045 1269 aa12.33□□□□□ -0.44
TPT1-214ENST00000616577 HDAC1Q13547 482 aaPredicted RBP12.33□□□□□ -0.44
TPT1-214ENST00000616577 NOS1P29475 1434 aa12.33□□□□□ -0.44
TPT1-214ENST00000616577 ERCC4Q92889 916 aaPredicted RBP12.32□□□□□ -0.44
TPT1-214ENST00000616577 SPINK5Q9NQ38 1064 aaPredicted RBP12.32□□□□□ -0.44
TPT1-214ENST00000616577 CCDC69A6NI79 296 aa12.32□□□□□ -0.44
TPT1-214ENST00000616577 RLBP1P12271 317 aa12.32□□□□□ -0.44
TPT1-214ENST00000616577 TOM1L2Q6ZVM7 507 aa12.32□□□□□ -0.44
TPT1-214ENST00000616577 PARD3Q8TEW0 1356 aa12.32□□□□□ -0.44
TPT1-214ENST00000616577 KLHL40Q2TBA0 621 aa12.32□□□□□ -0.44
TPT1-214ENST00000616577 FBXO31Q5XUX0 539 aaPredicted RBP12.32□□□□□ -0.44
TPT1-214ENST00000616577 CCDC43Q96MW1 224 aaKnown RBP12.32□□□□□ -0.44
TPT1-214ENST00000616577 NACAP1Q9BZK3 213 aa12.32□□□□□ -0.44
TPT1-214ENST00000616577 MAGEC2Q9UBF1 373 aaPredicted RBP12.32□□□□□ -0.44
TPT1-214ENST00000616577 CTNNA3Q9UI47 895 aa12.32□□□□□ -0.44
TPT1-214ENST00000616577 GUCY1B3Q02153 619 aa12.32□□□□□ -0.44
TPT1-214ENST00000616577 NUCB1Q02818 461 aa12.32□□□□□ -0.44
TPT1-214ENST00000616577 SCAND2PQ9GZW5 306 aaPredicted RBP12.32□□□□□ -0.44
TPT1-214ENST00000616577 TFIP11Q9UBB9 837 aaKnown RBP12.32□□□□□ -0.44
TPT1-214ENST00000616577 BICRAQ9NZM4 1560 aa12.32□□□□□ -0.44
TPT1-214ENST00000616577 NOM1Q5C9Z4 860 aaKnown RBP12.31□□□□□ -0.44
TPT1-214ENST00000616577 TTC22Q5TAA0 569 aa12.31□□□□□ -0.44
TPT1-214ENST00000616577 C14orf93Q9H972 538 aaKnown RBP12.31□□□□□ -0.44
TPT1-214ENST00000616577 IDH1O75874 414 aaKnown RBP12.31□□□□□ -0.44
TPT1-214ENST00000616577 CFAP100Q494V2 611 aa12.31□□□□□ -0.44
TPT1-214ENST00000616577 AXDND1Q5T1B0 1012 aaPredicted RBP12.31□□□□□ -0.44
TPT1-214ENST00000616577 SH2B1Q9NRF2 756 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms