RNA–Protein interactions for RNA: ENST00000615229.4

ACACA-236, Transcript of acetyl-CoA carboxylase alpha, humanhuman

TSL 1 (best)

Gene ACACA, Length 1,468 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACACA-236ENST00000615229 SBF2Q86WG5 1849 aa28.99■■■□□ 2.23
ACACA-236ENST00000615229 RAPGEF4Q8WZA2 1011 aa28.98■■■□□ 2.23
ACACA-236ENST00000615229 DDB1Q16531 1140 aa28.97■■■□□ 2.23
ACACA-236ENST00000615229 TATP17735 454 aaPredicted RBP28.97■■■□□ 2.23
ACACA-236ENST00000615229 KAT6BQ8WYB5 2073 aa28.95■■■□□ 2.23
ACACA-236ENST00000615229 KRT27Q7Z3Y8 459 aa28.95■■■□□ 2.22
ACACA-236ENST00000615229 FAM182BQ5T319 152 aa28.94■■■□□ 2.22
ACACA-236ENST00000615229 NUDCQ9Y266 331 aa28.94■■■□□ 2.22
ACACA-236ENST00000615229 EXOC5O00471 708 aa28.92■■■□□ 2.22
ACACA-236ENST00000615229 U2AF1L5P0DN76 240 aaPredicted RBP28.92■■■□□ 2.22
ACACA-236ENST00000615229 U2AF1Q01081 240 aaKnown RBP eCLIP28.92■■■□□ 2.22
ACACA-236ENST00000615229 DOT1LQ8TEK3 1739 aa28.91■■■□□ 2.22
ACACA-236ENST00000615229 PDE3BQ13370 1112 aa28.91■■■□□ 2.22
ACACA-236ENST00000615229 MARCH10Q8NA82 808 aaPredicted RBP28.91■■■□□ 2.22
ACACA-236ENST00000615229 TOGARAM1Q9Y4F4 1720 aa28.9■■■□□ 2.22
ACACA-236ENST00000615229 ZCRB1Q8TBF4 217 aaKnown RBP28.9■■■□□ 2.22
ACACA-236ENST00000615229 RSPH6AQ9H0K4 717 aa28.9■■■□□ 2.22
ACACA-236ENST00000615229 DLG5Q8TDM6 1919 aa28.89■■■□□ 2.22
ACACA-236ENST00000615229 PLEKHG2Q9H7P9 1386 aa28.87■■■□□ 2.21
ACACA-236ENST00000615229 ITGB4P16144 1822 aa28.85■■■□□ 2.21
ACACA-236ENST00000615229 DDX54Q8TDD1 881 aaKnown RBP28.85■■■□□ 2.21
ACACA-236ENST00000615229 TNS1Q9HBL0 1735 aaKnown RBP28.85■■■□□ 2.21
ACACA-236ENST00000615229 PRKAR2BP31323 418 aa28.85■■■□□ 2.21
ACACA-236ENST00000615229 MRS2Q9HD23 443 aa28.85■■■□□ 2.21
ACACA-236ENST00000615229 NHSQ6T4R5 1651 aa28.84■■■□□ 2.21
ACACA-236ENST00000615229 PCDH11XQ9BZA7 1347 aa28.84■■■□□ 2.21
ACACA-236ENST00000615229 PCDH11YQ9BZA8 1340 aa28.84■■■□□ 2.21
ACACA-236ENST00000615229 SCN11AQ9UI33 1791 aa28.83■■■□□ 2.21
ACACA-236ENST00000615229 CYP27B1O15528 508 aa28.83■■■□□ 2.21
ACACA-236ENST00000615229 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.82■■■□□ 2.22e-8■■■■■ 30.9
ACACA-236ENST00000615229 SPG7Q9UQ90 795 aa28.82■■■□□ 2.2
ACACA-236ENST00000615229 FCHSD2O94868 740 aa28.8■■■□□ 2.2
ACACA-236ENST00000615229 WDR43Q15061 677 aaKnown RBP eCLIP28.8■■■□□ 2.2
ACACA-236ENST00000615229 PLEKHO1Q53GL0 409 aaPredicted RBP28.8■■■□□ 2.2
ACACA-236ENST00000615229 MIER1Q8N108 512 aa28.79■■■□□ 2.2
ACACA-236ENST00000615229 PHACTR3Q96KR7 559 aa28.79■■■□□ 2.2
ACACA-236ENST00000615229 ZNF530Q6P9A1 599 aaPredicted RBP28.78■■■□□ 2.2
ACACA-236ENST00000615229 BCL9O00512 1426 aa28.78■■■□□ 2.2
ACACA-236ENST00000615229 MTHFSDQ2M296 383 aaKnown RBP28.78■■■□□ 2.2
ACACA-236ENST00000615229 AMOTQ4VCS5 1084 aa28.78■■■□□ 2.2
ACACA-236ENST00000615229 ADAMTS8Q9UP79 889 aa28.78■■■□□ 2.2
ACACA-236ENST00000615229 BTAF1O14981 1849 aa28.78■■■□□ 2.2
ACACA-236ENST00000615229 PHKG2P15735 406 aa28.77■■■□□ 2.2
ACACA-236ENST00000615229 PLEKHF1Q96S99 279 aa28.77■■■□□ 2.2
ACACA-236ENST00000615229 ADAMTS7Q9UKP4 1686 aa28.77■■■□□ 2.2
ACACA-236ENST00000615229 FAM196AQ6ZSG2 479 aa28.76■■■□□ 2.19
ACACA-236ENST00000615229 PNISRQ8TF01 805 aaKnown RBP28.75■■■□□ 2.19
ACACA-236ENST00000615229 IFNL2Q8IZJ0 200 aa28.74■■■□□ 2.19
ACACA-236ENST00000615229 CCDC146Q8IYE0 955 aa28.73■■■□□ 2.19
ACACA-236ENST00000615229 KDM6AO15550 1401 aaPredicted RBP28.73■■■□□ 2.19
ACACA-236ENST00000615229 ACSBG1Q96GR2 724 aa28.72■■■□□ 2.19
ACACA-236ENST00000615229 PTF1AQ7RTS3 328 aa28.71■■■□□ 2.19
ACACA-236ENST00000615229 NKX1-1Q15270 411 aaPredicted RBP28.7■■■□□ 2.18
ACACA-236ENST00000615229 SIPA1L3O60292 1781 aaPredicted RBP28.69■■■□□ 2.18
ACACA-236ENST00000615229 CCER2I3L3R5 266 aa28.69■■■□□ 2.18
ACACA-236ENST00000615229 TRIM37O94972 964 aa28.69■■■□□ 2.18
ACACA-236ENST00000615229 C1orf141Q5JVX7 400 aa28.69■■■□□ 2.18
ACACA-236ENST00000615229 AKAP4Q5JQC9 854 aa28.68■■■□□ 2.18
ACACA-236ENST00000615229 GAS2L2Q8NHY3 880 aa28.68■■■□□ 2.18
ACACA-236ENST00000615229 KCNQ2O43526 872 aa28.67■■■□□ 2.18
ACACA-236ENST00000615229 MAP3K5Q99683 1374 aa28.67■■■□□ 2.18
ACACA-236ENST00000615229 UPF1Q92900 1129 aaKnown RBP eCLIP28.66■■■□□ 2.18
ACACA-236ENST00000615229 MAPK8IP3Q9UPT6 1336 aa28.66■■■□□ 2.18
ACACA-236ENST00000615229 MPRIPQ6WCQ1 1025 aa28.66■■■□□ 2.18
ACACA-236ENST00000615229 PNNQ9H307 717 aaKnown RBP28.66■■■□□ 2.18
ACACA-236ENST00000615229 RUNDC1Q96C34 613 aa28.65■■■□□ 2.18
ACACA-236ENST00000615229 FAM9BQ8IZU0 186 aa28.64■■■□□ 2.17
ACACA-236ENST00000615229 NEFMP07197 916 aa28.63■■■□□ 2.17
ACACA-236ENST00000615229 PRIM1P49642 420 aaKnown RBP28.63■■■□□ 2.17
ACACA-236ENST00000615229 MRC1P22897 1456 aa28.63■■■□□ 2.17
ACACA-236ENST00000615229 RGPD3A6NKT7 1758 aaPredicted RBP28.62■■■□□ 2.17
ACACA-236ENST00000615229 RGPD4Q7Z3J3 1758 aa28.62■■■□□ 2.17
ACACA-236ENST00000615229 HSP90AB1P08238 724 aaKnown RBP28.62■■■□□ 2.17
ACACA-236ENST00000615229 NFE2L2Q16236 605 aa28.62■■■□□ 2.17
ACACA-236ENST00000615229 DCAF5Q96JK2 942 aa28.62■■■□□ 2.17
ACACA-236ENST00000615229 LGR6Q9HBX8 967 aa28.62■■■□□ 2.17
ACACA-236ENST00000615229 SYTL4Q96C24 671 aaPredicted RBP28.61■■■□□ 2.17
ACACA-236ENST00000615229 LY75O60449 1722 aa28.6■■■□□ 2.17
ACACA-236ENST00000615229 GNAT3A8MTJ3 354 aa28.6■■■□□ 2.17
ACACA-236ENST00000615229 BCL11BQ9C0K0 894 aaPredicted RBP28.6■■■□□ 2.17
ACACA-236ENST00000615229 RNMTO43148 476 aaKnown RBP28.59■■■□□ 2.17
ACACA-236ENST00000615229 RRP7AQ9Y3A4 280 aaKnown RBP28.59■■■□□ 2.17
ACACA-236ENST00000615229 PAPPAQ13219 1627 aa28.59■■■□□ 2.17
ACACA-236ENST00000615229 TMPOP42166 694 aaKnown RBP28.58■■■□□ 2.17
ACACA-236ENST00000615229 RREB1Q92766 1687 aa28.57■■■□□ 2.16
ACACA-236ENST00000615229 SENP3-EIF4A1A0A087X0R7 540 aa28.57■■■□□ 2.16
ACACA-236ENST00000615229 IL17REQ8NFR9 667 aa28.57■■■□□ 2.16
ACACA-236ENST00000615229 SOCS7O14512 581 aa28.56■■■□□ 2.16
ACACA-236ENST00000615229 DCTN1Q14203 1278 aa28.55■■■□□ 2.16
ACACA-236ENST00000615229 CEMIPQ8WUJ3 1361 aa28.54■■■□□ 2.16
ACACA-236ENST00000615229 ERVV-2B6SEH9 535 aa28.54■■■□□ 2.16
ACACA-236ENST00000615229 APAF1O14727 1248 aa28.54■■■□□ 2.16
ACACA-236ENST00000615229 MCM10Q7L590 875 aa28.54■■■□□ 2.16
ACACA-236ENST00000615229 APBA3O96018 575 aa28.53■■■□□ 2.16
ACACA-236ENST00000615229 NEUROD2Q15784 382 aa28.53■■■□□ 2.16
ACACA-236ENST00000615229 PIGBQ92521 554 aa28.53■■■□□ 2.16
ACACA-236ENST00000615229 RIPK4P57078 832 aa28.53■■■□□ 2.16
ACACA-236ENST00000615229 DEFB132Q7Z7B7 95 aa28.53■■■□□ 2.16
ACACA-236ENST00000615229 TMOD3Q9NYL9 352 aa28.53■■■□□ 2.16
ACACA-236ENST00000615229 NUP188Q5SRE5 1749 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms