RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 NFXL1Q6ZNB6 911 aa8.09□□□□□ -1.11
CLCN3-211ENST00000613795 RALYLQ86SE5 291 aaKnown RBP8.09□□□□□ -1.11
CLCN3-211ENST00000613795 PPFIBP1Q86W92 1011 aa8.09□□□□□ -1.11
CLCN3-211ENST00000613795 CDCA7LQ96GN5 454 aa8.09□□□□□ -1.11
CLCN3-211ENST00000613795 PSMD1Q99460 953 aa8.09□□□□□ -1.11
CLCN3-211ENST00000613795 TBC1D2Q9BYX2 928 aa8.09□□□□□ -1.11
CLCN3-211ENST00000613795 POLA1P09884 1462 aaPredicted RBP8.09□□□□□ -1.11
CLCN3-211ENST00000613795 POLR3GO15318 223 aaPredicted RBP8.08□□□□□ -1.12
CLCN3-211ENST00000613795 TUBB4AP04350 444 aa8.08□□□□□ -1.12
CLCN3-211ENST00000613795 SKIDA1Q1XH10 827 aa8.08□□□□□ -1.12
CLCN3-211ENST00000613795 TTC31Q49AM3 519 aaPredicted RBP8.08□□□□□ -1.12
CLCN3-211ENST00000613795 KIAA1328Q86T90 577 aa8.08□□□□□ -1.12
CLCN3-211ENST00000613795 PPP6R1Q9UPN7 881 aa8.08□□□□□ -1.12
CLCN3-211ENST00000613795 CCDC171Q6TFL3 1326 aa8.08□□□□□ -1.12
CLCN3-211ENST00000613795 JAKMIP3Q5VZ66 844 aa8.08□□□□□ -1.12
CLCN3-211ENST00000613795 LUZP1Q86V48 1076 aa8.08□□□□□ -1.12
CLCN3-211ENST00000613795 ERBINQ96RT1 1412 aa8.08□□□□□ -1.12
CLCN3-211ENST00000613795 SRCIN1Q9C0H9 1055 aa8.08□□□□□ -1.12
CLCN3-211ENST00000613795 GSDMDP57764 484 aa8.08□□□□□ -1.12
CLCN3-211ENST00000613795 ANKRD1Q15327 319 aa8.08□□□□□ -1.12
CLCN3-211ENST00000613795 DHX29Q7Z478 1369 aaKnown RBP8.08□□□□□ -1.12
CLCN3-211ENST00000613795 GOLGA6L10A0A0M3HER8 536 aa8.08□□□□□ -1.12
CLCN3-211ENST00000613795 ZNHIT6Q9NWK9 470 aaKnown RBP8.08□□□□□ -1.12
CLCN3-211ENST00000613795 MAGI1Q96QZ7 1491 aaPredicted RBP8.07□□□□□ -1.12
CLCN3-211ENST00000613795 CCDC148Q8NFR7 591 aa8.07□□□□□ -1.12
CLCN3-211ENST00000613795 ZSCAN31Q96LW9 406 aaPredicted RBP8.07□□□□□ -1.12
CLCN3-211ENST00000613795 LUC7LQ9NQ29 371 aaKnown RBP8.07□□□□□ -1.12
CLCN3-211ENST00000613795 GNL3LQ9NVN8 582 aaKnown RBP8.07□□□□□ -1.12
CLCN3-211ENST00000613795 NOLC1Q14978 699 aaKnown RBP eCLIP8.07□□□□□ -1.12
CLCN3-211ENST00000613795 ZSCAN25Q6NSZ9 544 aa8.07□□□□□ -1.12
CLCN3-211ENST00000613795 MPNDQ8N594 471 aa8.07□□□□□ -1.12
CLCN3-211ENST00000613795 RAD21O60216 631 aa8.07□□□□□ -1.12
CLCN3-211ENST00000613795 SFPQP23246 707 aaKnown RBP eCLIP8.07□□□□□ -1.12
CLCN3-211ENST00000613795 LMAN1P49257 510 aa8.07□□□□□ -1.12
CLCN3-211ENST00000613795 CCDC181Q5TID7 509 aa8.07□□□□□ -1.12
CLCN3-211ENST00000613795 JMYQ8N9B5 988 aa8.07□□□□□ -1.12
CLCN3-211ENST00000613795 SPG7Q9UQ90 795 aa8.07□□□□□ -1.12
CLCN3-211ENST00000613795 EPRSP07814 1512 aaKnown RBP8.07□□□□□ -1.12
CLCN3-211ENST00000613795 GOLGA6L9A6NEM1 432 aa8.07□□□□□ -1.12
CLCN3-211ENST00000613795 TATP17735 454 aaPredicted RBP8.07□□□□□ -1.12
CLCN3-211ENST00000613795 PPP2R1AP30153 589 aa8.07□□□□□ -1.12
CLCN3-211ENST00000613795 CASQ1P31415 396 aa8.07□□□□□ -1.12
CLCN3-211ENST00000613795 CLASRPQ8N2M8 674 aaKnown RBP8.07□□□□□ -1.12
CLCN3-211ENST00000613795 NUTM2FA1L443 756 aa8.06□□□□□ -1.12
CLCN3-211ENST00000613795 ZNF397Q8NF99 534 aaPredicted RBP8.06□□□□□ -1.12
CLCN3-211ENST00000613795 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.06□□□□□ -1.12
CLCN3-211ENST00000613795 A0A1B0GUL7 405 aa8.06□□□□□ -1.12
CLCN3-211ENST00000613795 ADAMTS8Q9UP79 889 aa8.06□□□□□ -1.12
CLCN3-211ENST00000613795 CAVIN2O95810 425 aa8.06□□□□□ -1.12
CLCN3-211ENST00000613795 LRSAM1Q6UWE0 723 aa8.06□□□□□ -1.12
CLCN3-211ENST00000613795 SLC26A8Q96RN1 970 aa8.06□□□□□ -1.12
CLCN3-211ENST00000613795 CFAP45Q9UL16 551 aa8.06□□□□□ -1.12
CLCN3-211ENST00000613795 ELL2O00472 640 aaPredicted RBP8.06□□□□□ -1.12
CLCN3-211ENST00000613795 CEP135Q66GS9 1140 aa8.06□□□□□ -1.12
CLCN3-211ENST00000613795 SMARCC1Q92922 1105 aaPredicted RBP8.06□□□□□ -1.12
CLCN3-211ENST00000613795 CCDC43Q96MW1 224 aaKnown RBP8.06□□□□□ -1.12
CLCN3-211ENST00000613795 UPF3BQ9BZI7 483 aaKnown RBP8.06□□□□□ -1.12
CLCN3-211ENST00000613795 V9GYY5 206 aaPredicted RBP8.06□□□□□ -1.12
CLCN3-211ENST00000613795 RTEL1-TNFRSF6BF6WH68 1400 aa8.06□□□□□ -1.12
CLCN3-211ENST00000613795 GNAI2P04899 355 aa8.05□□□□□ -1.12
CLCN3-211ENST00000613795 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.05□□□□□ -1.12
CLCN3-211ENST00000613795 ADCY5O95622 1261 aa8.05□□□□□ -1.12
CLCN3-211ENST00000613795 NLRP6P59044 892 aa8.05□□□□□ -1.12
CLCN3-211ENST00000613795 MVPQ14764 893 aaKnown RBP8.05□□□□□ -1.12
CLCN3-211ENST00000613795 TICAM2Q86XR7 235 aa8.05□□□□□ -1.12
CLCN3-211ENST00000613795 RRAGDQ9NQL2 400 aaPredicted RBP8.05□□□□□ -1.12
CLCN3-211ENST00000613795 CLIP2Q9UDT6 1046 aa8.05□□□□□ -1.12
CLCN3-211ENST00000613795 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.05□□□□□ -1.12
CLCN3-211ENST00000613795 ODF2Q5BJF6 829 aa8.05□□□□□ -1.12
CLCN3-211ENST00000613795 CHD1LQ86WJ1 897 aa8.05□□□□□ -1.12
CLCN3-211ENST00000613795 PLCD3Q8N3E9 789 aa8.05□□□□□ -1.12
CLCN3-211ENST00000613795 SPATA32Q96LK8 384 aa8.05□□□□□ -1.12
CLCN3-211ENST00000613795 C16orf45Q96MC5 204 aaPredicted RBP8.05□□□□□ -1.12
CLCN3-211ENST00000613795 USP25Q9UHP3 1055 aa8.05□□□□□ -1.12
CLCN3-211ENST00000613795 URI1O94763 535 aaPredicted RBP8.04□□□□□ -1.12
CLCN3-211ENST00000613795 FAM193AP78312 1265 aa8.04□□□□□ -1.12
CLCN3-211ENST00000613795 STK38Q15208 465 aa8.04□□□□□ -1.12
CLCN3-211ENST00000613795 TXNDC2Q86VQ3 553 aa8.04□□□□□ -1.12
CLCN3-211ENST00000613795 FMNL2Q96PY5 1086 aa8.04□□□□□ -1.12
CLCN3-211ENST00000613795 ZSCAN23Q3MJ62 389 aa8.04□□□□□ -1.12
CLCN3-211ENST00000613795 CABP2Q9NPB3 220 aa8.04□□□□□ -1.12
CLCN3-211ENST00000613795 MAGEC2Q9UBF1 373 aaPredicted RBP8.04□□□□□ -1.12
CLCN3-211ENST00000613795 THOC2Q8NI27 1593 aaKnown RBP8.04□□□□□ -1.12
CLCN3-211ENST00000613795 CCDC158Q5M9N0 1113 aa8.04□□□□□ -1.12
CLCN3-211ENST00000613795 SRRTQ9BXP5 876 aaKnown RBP8.04□□□□□ -1.12
CLCN3-211ENST00000613795 NLRP2Q9NX02 1062 aa8.04□□□□□ -1.12
CLCN3-211ENST00000613795 ZNF644Q9H582 1327 aaPredicted RBP8.04□□□□□ -1.12
CLCN3-211ENST00000613795 CTAGE5O15320 804 aa8.04□□□□□ -1.12
CLCN3-211ENST00000613795 KIF5CO60282 957 aa8.04□□□□□ -1.12
CLCN3-211ENST00000613795 ANO10Q9NW15 660 aa8.04□□□□□ -1.12
CLCN3-211ENST00000613795 CYP46A1Q9Y6A2 500 aa8.04□□□□□ -1.12
CLCN3-211ENST00000613795 ABCC11Q96J66 1382 aa8.04□□□□□ -1.12
CLCN3-211ENST00000613795 GBP2P32456 591 aaPredicted RBP8.04□□□□□ -1.12
CLCN3-211ENST00000613795 ARHGAP29Q52LW3 1261 aa8.04□□□□□ -1.12
CLCN3-211ENST00000613795 UTP14CQ5TAP6 766 aaKnown RBP8.04□□□□□ -1.12
CLCN3-211ENST00000613795 CCDC83Q8IWF9 413 aa8.04□□□□□ -1.12
CLCN3-211ENST00000613795 TBC1D32Q96NH3 1257 aa8.04□□□□□ -1.12
CLCN3-211ENST00000613795 BAG4O95429 457 aaKnown RBP8.03□□□□□ -1.12
CLCN3-211ENST00000613795 TXLNAP40222 546 aa8.03□□□□□ -1.12
CLCN3-211ENST00000613795 TUBB4BP68371 445 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms