RNA–Protein interactions for RNA: ENST00000606706.5

LINC00458-205, long intergenic non-protein coding RNA 458, humanhuman

TSL 2

Gene LINC00458, Length 833 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-205ENST00000606706 SH3D19Q5HYK7 790 aa10.56□□□□□ -0.72
LINC00458-205ENST00000606706 CNTNAP5Q8WYK1 1306 aa10.56□□□□□ -0.72
LINC00458-205ENST00000606706 RNF144AP50876 292 aaPredicted RBP10.55□□□□□ -0.72
LINC00458-205ENST00000606706 ENAMQ9NRM1 1142 aa10.55□□□□□ -0.72
LINC00458-205ENST00000606706 MBIPQ9NS73 344 aa10.55□□□□□ -0.72
LINC00458-205ENST00000606706 PLA2G4EQ3MJ16 856 aa10.54□□□□□ -0.72
LINC00458-205ENST00000606706 TRIM22Q8IYM9 498 aa10.54□□□□□ -0.72
LINC00458-205ENST00000606706 ATP1B4Q9UN42 357 aaPredicted RBP10.54□□□□□ -0.72
LINC00458-205ENST00000606706 IGF1RP08069 1367 aa10.53□□□□□ -0.72
LINC00458-205ENST00000606706 DBN1Q16643 649 aa10.53□□□□□ -0.72
LINC00458-205ENST00000606706 DCAF5Q96JK2 942 aa10.53□□□□□ -0.72
LINC00458-205ENST00000606706 ITGB2P05107 769 aa10.52□□□□□ -0.73
LINC00458-205ENST00000606706 PNMA1Q8ND90 353 aa10.52□□□□□ -0.73
LINC00458-205ENST00000606706 PHF20L1A8MW92 1017 aa10.51□□□□□ -0.73
LINC00458-205ENST00000606706 USP17L8P0C7I0 530 aa10.51□□□□□ -0.73
LINC00458-205ENST00000606706 RIPOR1Q6ZS17 1223 aa10.51□□□□□ -0.73
LINC00458-205ENST00000606706 GMCL1Q96IK5 515 aa10.51□□□□□ -0.73
LINC00458-205ENST00000606706 MSTNO14793 375 aa10.5□□□□□ -0.73
LINC00458-205ENST00000606706 SEPT12Q8IYM1 358 aa10.5□□□□□ -0.73
LINC00458-205ENST00000606706 ATP5J2-PTCD1G3V325 749 aa10.49□□□□□ -0.73
LINC00458-205ENST00000606706 BCRP11274 1271 aa10.49□□□□□ -0.73
LINC00458-205ENST00000606706 FOXR1Q6PIV2 292 aa10.49□□□□□ -0.73
LINC00458-205ENST00000606706 NEDD1Q8NHV4 660 aa10.49□□□□□ -0.73
LINC00458-205ENST00000606706 GTPBP3Q969Y2 492 aaKnown RBP10.49□□□□□ -0.73
LINC00458-205ENST00000606706 ACDQ96AP0 544 aa10.49□□□□□ -0.73
LINC00458-205ENST00000606706 SPOCK3Q9BQ16 436 aa10.49□□□□□ -0.73
LINC00458-205ENST00000606706 MEN1O00255 615 aa10.48□□□□□ -0.73
LINC00458-205ENST00000606706 FAM117AQ9C073 453 aa10.48□□□□□ -0.73
LINC00458-205ENST00000606706 ADAM23O75077 832 aa10.47□□□□□ -0.73
LINC00458-205ENST00000606706 BEND7Q8N7W2 519 aaPredicted RBP10.47□□□□□ -0.73
LINC00458-205ENST00000606706 GPBP1L1Q9HC44 474 aaPredicted RBP10.47□□□□□ -0.73
LINC00458-205ENST00000606706 DYRK1BQ9Y463 629 aa10.47□□□□□ -0.73
LINC00458-205ENST00000606706 A0A1W2PRU2 124 aa10.46□□□□□ -0.73
LINC00458-205ENST00000606706 GIGYF1O75420 1035 aaPredicted RBP10.46□□□□□ -0.73
LINC00458-205ENST00000606706 GPC1P35052 558 aa10.46□□□□□ -0.73
LINC00458-205ENST00000606706 POU4F2Q12837 409 aa10.46□□□□□ -0.73
LINC00458-205ENST00000606706 XP32Q5T750 250 aa10.46□□□□□ -0.73
LINC00458-205ENST00000606706 PODNQ7Z5L7 613 aa10.46□□□□□ -0.73
LINC00458-205ENST00000606706 GAS2L1Q99501 681 aaPredicted RBP10.46□□□□□ -0.73
LINC00458-205ENST00000606706 KDM4CQ9H3R0 1056 aa10.46□□□□□ -0.73
LINC00458-205ENST00000606706 PROCP04070 461 aa10.45□□□□□ -0.74
LINC00458-205ENST00000606706 H7C1W4 665 aa10.44□□□□□ -0.74
LINC00458-205ENST00000606706 TRIM34Q9BYJ4 488 aa10.44□□□□□ -0.74
LINC00458-205ENST00000606706 DDRGK1Q96HY6 314 aa10.43□□□□□ -0.74
LINC00458-205ENST00000606706 TRERF1Q96PN7 1200 aa10.43□□□□□ -0.74
LINC00458-205ENST00000606706 PCDHB9Q9Y5E1 797 aa10.43□□□□□ -0.74
LINC00458-205ENST00000606706 RFC5P40937 340 aa10.42□□□□□ -0.74
LINC00458-205ENST00000606706 SLC27A3Q5K4L6 730 aa10.42□□□□□ -0.74
LINC00458-205ENST00000606706 TRIM52Q96A61 297 aa10.42□□□□□ -0.74
LINC00458-205ENST00000606706 MX2P20592 715 aa10.41□□□□□ -0.74
LINC00458-205ENST00000606706 ERVK-9P63128 1117 aa10.41□□□□□ -0.74
LINC00458-205ENST00000606706 NBPF10Q6P3W6 841 aaKnown RBP10.41□□□□□ -0.74
LINC00458-205ENST00000606706 NBPF15Q8N660 670 aa10.41□□□□□ -0.74
LINC00458-205ENST00000606706 GRIP2Q9C0E4 1043 aa10.41□□□□□ -0.74
LINC00458-205ENST00000606706 CC2D2BQ6DHV5 1058 aa10.4□□□□□ -0.74
LINC00458-205ENST00000606706 NLRP3Q96P20 1036 aa10.4□□□□□ -0.74
LINC00458-205ENST00000606706 ZBBXA8MT70 800 aa10.39□□□□□ -0.75
LINC00458-205ENST00000606706 GALNT6Q8NCL4 622 aa10.39□□□□□ -0.75
LINC00458-205ENST00000606706 LRRC4BQ9NT99 713 aa10.39□□□□□ -0.75
LINC00458-205ENST00000606706 OIP5O43482 229 aa10.38□□□□□ -0.75
LINC00458-205ENST00000606706 FBXO45P0C2W1 286 aa10.38□□□□□ -0.75
LINC00458-205ENST00000606706 NUCKS1Q9H1E3 243 aaKnown RBP10.38□□□□□ -0.75
LINC00458-205ENST00000606706 SPATA31C2B4DYI2 1134 aa10.37□□□□□ -0.75
LINC00458-205ENST00000606706 SCTRP47872 440 aa10.37□□□□□ -0.75
LINC00458-205ENST00000606706 SNRPNP63162 240 aaKnown RBP10.37□□□□□ -0.75
LINC00458-205ENST00000606706 CLN3Q13286 438 aa10.37□□□□□ -0.75
LINC00458-205ENST00000606706 TIMMDC1Q9NPL8 285 aa10.37□□□□□ -0.75
LINC00458-205ENST00000606706 NSFL1CQ9UNZ2 370 aaKnown RBP10.37□□□□□ -0.75
LINC00458-205ENST00000606706 CYP2U1Q7Z449 544 aa10.36□□□□□ -0.75
LINC00458-205ENST00000606706 F11P03951 625 aa10.35□□□□□ -0.75
LINC00458-205ENST00000606706 THBS1P07996 1170 aa10.35□□□□□ -0.75
LINC00458-205ENST00000606706 OXCT2Q9BYC2 517 aaPredicted RBP10.35□□□□□ -0.75
LINC00458-205ENST00000606706 ARHGEF10LQ9HCE6 1279 aa10.35□□□□□ -0.75
LINC00458-205ENST00000606706 KRBA1A5PL33 1030 aa10.34□□□□□ -0.75
LINC00458-205ENST00000606706 WASLO00401 505 aaPredicted RBP10.34□□□□□ -0.75
LINC00458-205ENST00000606706 WDR44Q5JSH3 913 aa10.34□□□□□ -0.75
LINC00458-205ENST00000606706 CCDC125Q86Z20 511 aa10.34□□□□□ -0.75
LINC00458-205ENST00000606706 SHISA8B8ZZ34 492 aa10.33□□□□□ -0.76
LINC00458-205ENST00000606706 MAP2K3P46734 347 aa10.33□□□□□ -0.76
LINC00458-205ENST00000606706 TAS1R3Q7RTX0 852 aa10.33□□□□□ -0.76
LINC00458-205ENST00000606706 OSBPL3Q9H4L5 887 aa10.33□□□□□ -0.76
LINC00458-205ENST00000606706 K7ELQ4 463 aaPredicted RBP10.32□□□□□ -0.76
LINC00458-205ENST00000606706 RNF20Q5VTR2 975 aa10.32□□□□□ -0.76
LINC00458-205ENST00000606706 C1orf229Q6ZS94 237 aaPredicted RBP10.32□□□□□ -0.76
LINC00458-205ENST00000606706 GJD4Q96KN9 370 aaPredicted RBP10.32□□□□□ -0.76
LINC00458-205ENST00000606706 PCDHB11Q9Y5F2 797 aa10.32□□□□□ -0.76
LINC00458-205ENST00000606706 TRAK2O60296 914 aa10.31□□□□□ -0.76
LINC00458-205ENST00000606706 BAG6P46379 1132 aa10.31□□□□□ -0.76
LINC00458-205ENST00000606706 CFHR5Q9BXR6 569 aa10.31□□□□□ -0.76
LINC00458-205ENST00000606706 KLRG1Q96E93 195 aa10.3□□□□□ -0.76
LINC00458-205ENST00000606706 GPAMQ9HCL2 828 aa10.3□□□□□ -0.76
LINC00458-205ENST00000606706 RAB6BQ9NRW1 208 aa10.3□□□□□ -0.76
LINC00458-205ENST00000606706 COL8A1P27658 744 aa10.29□□□□□ -0.76
LINC00458-205ENST00000606706 TMEM259Q4ZIN3 620 aa10.29□□□□□ -0.76
LINC00458-205ENST00000606706 MKL2Q9ULH7 1088 aa10.29□□□□□ -0.76
LINC00458-205ENST00000606706 IL2RAP01589 272 aa10.27□□□□□ -0.77
LINC00458-205ENST00000606706 PHKA2P46019 1235 aa10.27□□□□□ -0.77
LINC00458-205ENST00000606706 RRAGCQ9HB90 399 aa10.27□□□□□ -0.77
LINC00458-205ENST00000606706 CENPCQ03188 943 aa10.26□□□□□ -0.77
LINC00458-205ENST00000606706 NR1H3Q13133 447 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms