RNA–Protein interactions for RNA: ENST00000598229.1

LINC00343-205, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 735 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-205ENST00000598229 OVOS2A0A0J9YW53 1432 aa13.73□□□□□ -0.21
LINC00343-205ENST00000598229 OVOS2Q6IE36 1432 aa13.73□□□□□ -0.21
LINC00343-205ENST00000598229 ZBTB7AO95365 584 aa13.73□□□□□ -0.21
LINC00343-205ENST00000598229 ADGRB1O14514 1584 aa13.73□□□□□ -0.21
LINC00343-205ENST00000598229 POLR3AO14802 1390 aaPredicted RBP13.72□□□□□ -0.21
LINC00343-205ENST00000598229 NUTM2GQ5VZR2 741 aa13.72□□□□□ -0.21
LINC00343-205ENST00000598229 STAC3Q96MF2 364 aa13.72□□□□□ -0.21
LINC00343-205ENST00000598229 FHDC1Q9C0D6 1143 aaPredicted RBP13.72□□□□□ -0.21
LINC00343-205ENST00000598229 PDGFDQ9GZP0 370 aaPredicted RBP13.72□□□□□ -0.21
LINC00343-205ENST00000598229 USP19O94966 1318 aa13.71□□□□□ -0.21
LINC00343-205ENST00000598229 PLEKHG3A1L390 1219 aa13.71□□□□□ -0.21
LINC00343-205ENST00000598229 ABTB2Q8N961 1025 aa13.71□□□□□ -0.21
LINC00343-205ENST00000598229 BOLA1Q9Y3E2 137 aa13.71□□□□□ -0.21
LINC00343-205ENST00000598229 BCL9O00512 1426 aa13.71□□□□□ -0.22
LINC00343-205ENST00000598229 RGPD3A6NKT7 1758 aaPredicted RBP13.71□□□□□ -0.22
LINC00343-205ENST00000598229 RGPD4Q7Z3J3 1758 aa13.71□□□□□ -0.22
LINC00343-205ENST00000598229 RIOK3O14730 519 aaKnown RBP13.7□□□□□ -0.22
LINC00343-205ENST00000598229 GCP02774 474 aa13.7□□□□□ -0.22
LINC00343-205ENST00000598229 DDB1Q16531 1140 aa13.7□□□□□ -0.22
LINC00343-205ENST00000598229 DPY19L2Q6NUT2 758 aa13.7□□□□□ -0.22
LINC00343-205ENST00000598229 NLRP13Q86W25 1043 aa13.7□□□□□ -0.22
LINC00343-205ENST00000598229 MTFR1LQ9H019 292 aa13.7□□□□□ -0.22
LINC00343-205ENST00000598229 CASZ1Q86V15 1759 aa13.7□□□□□ -0.22
LINC00343-205ENST00000598229 NRKQ7Z2Y5 1582 aa13.7□□□□□ -0.22
LINC00343-205ENST00000598229 ACEP12821 1306 aa13.69□□□□□ -0.22
LINC00343-205ENST00000598229 PHRF1Q9P1Y6 1649 aaKnown RBP13.69□□□□□ -0.22
LINC00343-205ENST00000598229 STK32BQ9NY57 414 aa13.69□□□□□ -0.22
LINC00343-205ENST00000598229 CRB1P82279 1406 aa13.69□□□□□ -0.22
LINC00343-205ENST00000598229 PEAK1Q9H792 1746 aa13.68□□□□□ -0.22
LINC00343-205ENST00000598229 PARP4Q9UKK3 1724 aaKnown RBP13.68□□□□□ -0.22
LINC00343-205ENST00000598229 SLC15A2Q16348 729 aa13.68□□□□□ -0.22
LINC00343-205ENST00000598229 CDCA7Q9BWT1 371 aaPredicted RBP13.68□□□□□ -0.22
LINC00343-205ENST00000598229 CDK19Q9BWU1 502 aa13.68□□□□□ -0.22
LINC00343-205ENST00000598229 LMO7Q8WWI1 1683 aa13.68□□□□□ -0.22
LINC00343-205ENST00000598229 MAP3K5Q99683 1374 aa13.68□□□□□ -0.22
LINC00343-205ENST00000598229 COL5A2P05997 1499 aaPredicted RBP13.67□□□□□ -0.22
LINC00343-205ENST00000598229 TXNRD1Q16881 649 aa13.67□□□□□ -0.22
LINC00343-205ENST00000598229 PTF1AQ7RTS3 328 aa13.67□□□□□ -0.22
LINC00343-205ENST00000598229 EFCAB3Q8N7B9 438 aa13.67□□□□□ -0.22
LINC00343-205ENST00000598229 UTRNP46939 3433 aa13.66□□□□□ -0.22
LINC00343-205ENST00000598229 MARCH10Q8NA82 808 aaPredicted RBP13.66□□□□□ -0.22
LINC00343-205ENST00000598229 BRD4O60885 1362 aaPredicted RBP13.66□□□□□ -0.22
LINC00343-205ENST00000598229 AATKQ6ZMQ8 1374 aa13.66□□□□□ -0.22
LINC00343-205ENST00000598229 ARXQ96QS3 562 aa13.65□□□□□ -0.22
LINC00343-205ENST00000598229 MYOM1P52179 1685 aa13.64□□□□□ -0.23
LINC00343-205ENST00000598229 GIGYF1O75420 1035 aaPredicted RBP13.64□□□□□ -0.23
LINC00343-205ENST00000598229 ITSN1Q15811 1721 aa13.64□□□□□ -0.23
LINC00343-205ENST00000598229 RNF25Q96BH1 459 aaPredicted RBP13.63□□□□□ -0.23
LINC00343-205ENST00000598229 TOM1L2Q6ZVM7 507 aa13.62□□□□□ -0.23
LINC00343-205ENST00000598229 DCAF11Q8TEB1 546 aa13.62□□□□□ -0.23
LINC00343-205ENST00000598229 KDM2AQ9Y2K7 1162 aa13.62□□□□□ -0.23
LINC00343-205ENST00000598229 CHD4Q14839 1912 aa13.62□□□□□ -0.23
LINC00343-205ENST00000598229 SOX12O15370 315 aa13.61□□□□□ -0.23
LINC00343-205ENST00000598229 GPR162Q16538 588 aa13.61□□□□□ -0.23
LINC00343-205ENST00000598229 TAOK2Q9UL54 1235 aa13.61□□□□□ -0.23
LINC00343-205ENST00000598229 SBF2Q86WG5 1849 aa13.61□□□□□ -0.23
LINC00343-205ENST00000598229 CEP350Q5VT06 3117 aa13.61□□□□□ -0.23
LINC00343-205ENST00000598229 WDR17Q8IZU2 1322 aa13.61□□□□□ -0.23
LINC00343-205ENST00000598229 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.6□□□□□ -0.23
LINC00343-205ENST00000598229 ZFP91Q96JP5 570 aaPredicted RBP13.6□□□□□ -0.23
LINC00343-205ENST00000598229 CARD10Q9BWT7 1032 aa13.6□□□□□ -0.23
LINC00343-205ENST00000598229 EXOC5O00471 708 aa13.59□□□□□ -0.23
LINC00343-205ENST00000598229 NLRP6P59044 892 aa13.59□□□□□ -0.23
LINC00343-205ENST00000598229 MARVELD3Q96A59 401 aa13.59□□□□□ -0.23
LINC00343-205ENST00000598229 LRRC37A3O60309 1634 aa13.58□□□□□ -0.24
LINC00343-205ENST00000598229 SLC16A10Q8TF71 515 aa13.58□□□□□ -0.24
LINC00343-205ENST00000598229 AXIN2Q9Y2T1 843 aa13.58□□□□□ -0.24
LINC00343-205ENST00000598229 EMP3P54852 163 aa13.56□□□□□ -0.24
LINC00343-205ENST00000598229 TOPAZ1Q8N9V7 1692 aa13.56□□□□□ -0.24
LINC00343-205ENST00000598229 ZBTB7CA1YPR0 619 aa13.55□□□□□ -0.24
LINC00343-205ENST00000598229 ARHGEF25Q86VW2 580 aa13.55□□□□□ -0.24
LINC00343-205ENST00000598229 PPIP5K1Q6PFW1 1433 aa13.54□□□□□ -0.24
LINC00343-205ENST00000598229 SLIT3O75094 1523 aa13.54□□□□□ -0.24
LINC00343-205ENST00000598229 ARHGEF28Q8N1W1 1705 aaKnown RBP13.53□□□□□ -0.24
LINC00343-205ENST00000598229 GRIN3BO60391 1043 aa13.53□□□□□ -0.24
LINC00343-205ENST00000598229 POLD1P28340 1107 aa13.53□□□□□ -0.24
LINC00343-205ENST00000598229 SRPK2P78362 688 aaKnown RBP13.53□□□□□ -0.24
LINC00343-205ENST00000598229 KCNH5Q8NCM2 988 aa13.53□□□□□ -0.24
LINC00343-205ENST00000598229 CCDC7Q96M83 1385 aa13.53□□□□□ -0.24
LINC00343-205ENST00000598229 USP6P35125 1406 aa13.52□□□□□ -0.25
LINC00343-205ENST00000598229 COL18A1P39060 1754 aa13.51□□□□□ -0.25
LINC00343-205ENST00000598229 CPSF1Q10570 1443 aaKnown RBP13.51□□□□□ -0.25
LINC00343-205ENST00000598229 CSB-PGBD3P0DP91 1061 aa13.51□□□□□ -0.25
LINC00343-205ENST00000598229 ZNF827Q17R98 1081 aa13.51□□□□□ -0.25
LINC00343-205ENST00000598229 MICALL2Q8IY33 904 aa13.51□□□□□ -0.25
LINC00343-205ENST00000598229 CABP1Q9NZU7 370 aa13.51□□□□□ -0.25
LINC00343-205ENST00000598229 DOK7Q18PE1 504 aa13.5□□□□□ -0.25
LINC00343-205ENST00000598229 SLC27A3Q5K4L6 730 aa13.5□□□□□ -0.25
LINC00343-205ENST00000598229 LRRC4BQ9NT99 713 aa13.5□□□□□ -0.25
LINC00343-205ENST00000598229 TNS2Q63HR2 1409 aa13.49□□□□□ -0.25
LINC00343-205ENST00000598229 HOXB3P14651 431 aaPredicted RBP13.48□□□□□ -0.25
LINC00343-205ENST00000598229 ACSBG1Q96GR2 724 aa13.48□□□□□ -0.25
LINC00343-205ENST00000598229 PAPPAQ13219 1627 aa13.48□□□□□ -0.25
LINC00343-205ENST00000598229 AKAP12Q02952 1782 aa13.48□□□□□ -0.25
LINC00343-205ENST00000598229 SHANK3Q9BYB0 1731 aa13.47□□□□□ -0.25
LINC00343-205ENST00000598229 CENPJQ9HC77 1338 aaPredicted RBP13.47□□□□□ -0.25
LINC00343-205ENST00000598229 HSPA6P17066 643 aa13.47□□□□□ -0.25
LINC00343-205ENST00000598229 ZNF710Q8N1W2 664 aa13.47□□□□□ -0.25
LINC00343-205ENST00000598229 YBX3P16989 372 aaKnown RBP eCLIP13.46□□□□□ -0.25
LINC00343-205ENST00000598229 NLGN2Q8NFZ4 835 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms