RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 ADAMTS8Q9UP79 889 aa20.72■□□□□ 0.91
SMCO4-206ENST00000596676 PNISRQ8TF01 805 aaKnown RBP20.71■□□□□ 0.91
SMCO4-206ENST00000596676 LRRC37A3O60309 1634 aa20.71■□□□□ 0.91
SMCO4-206ENST00000596676 OVOS2A0A0G2JMS6 1433 aa20.7■□□□□ 0.9
SMCO4-206ENST00000596676 PRKAR2BP31323 418 aa20.7■□□□□ 0.9
SMCO4-206ENST00000596676 PHACTR3Q96KR7 559 aa20.7■□□□□ 0.9
SMCO4-206ENST00000596676 PARP4Q9UKK3 1724 aaKnown RBP20.7■□□□□ 0.9
SMCO4-206ENST00000596676 EXOC5O00471 708 aa20.69■□□□□ 0.9
SMCO4-206ENST00000596676 WDR43Q15061 677 aaKnown RBP eCLIP20.69■□□□□ 0.9
SMCO4-206ENST00000596676 DDB1Q16531 1140 aa20.69■□□□□ 0.9
SMCO4-206ENST00000596676 SENP3-EIF4A1A0A087X0R7 540 aa20.68■□□□□ 0.9
SMCO4-206ENST00000596676 CCDC146Q8IYE0 955 aa20.68■□□□□ 0.9
SMCO4-206ENST00000596676 MARCH10Q8NA82 808 aaPredicted RBP20.68■□□□□ 0.9
SMCO4-206ENST00000596676 ZCRB1Q8TBF4 217 aaKnown RBP20.68■□□□□ 0.9
SMCO4-206ENST00000596676 DDX54Q8TDD1 881 aaKnown RBP20.68■□□□□ 0.9
SMCO4-206ENST00000596676 CDCA7Q9BWT1 371 aaPredicted RBP20.68■□□□□ 0.9
SMCO4-206ENST00000596676 SHANK3Q9BYB0 1731 aa20.67■□□□□ 0.9
SMCO4-206ENST00000596676 CCER2I3L3R5 266 aa20.66■□□□□ 0.9
SMCO4-206ENST00000596676 FCHSD2O94868 740 aa20.66■□□□□ 0.9
SMCO4-206ENST00000596676 FAM9BQ8IZU0 186 aa20.66■□□□□ 0.9
SMCO4-206ENST00000596676 PLEKHF1Q96S99 279 aa20.66■□□□□ 0.9
SMCO4-206ENST00000596676 TNS2Q63HR2 1409 aa20.65■□□□□ 0.9
SMCO4-206ENST00000596676 CYP27B1O15528 508 aa20.65■□□□□ 0.9
SMCO4-206ENST00000596676 PDE3BQ13370 1112 aa20.65■□□□□ 0.9
SMCO4-206ENST00000596676 MTHFSDQ2M296 383 aaKnown RBP20.65■□□□□ 0.9
SMCO4-206ENST00000596676 KRT27Q7Z3Y8 459 aa20.65■□□□□ 0.9
SMCO4-206ENST00000596676 PLEKHO1Q53GL0 409 aaPredicted RBP20.64■□□□□ 0.89
SMCO4-206ENST00000596676 PKD1L3Q7Z443 1732 aa20.64■□□□□ 0.89
SMCO4-206ENST00000596676 ZNF530Q6P9A1 599 aaPredicted RBP20.62■□□□□ 0.89
SMCO4-206ENST00000596676 SPG7Q9UQ90 795 aa20.62■□□□□ 0.89
SMCO4-206ENST00000596676 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.6■□□□□ 0.89
SMCO4-206ENST00000596676 PHKG2P15735 406 aa20.59■□□□□ 0.89
SMCO4-206ENST00000596676 AMOTQ4VCS5 1084 aa20.59■□□□□ 0.89
SMCO4-206ENST00000596676 RRP7AQ9Y3A4 280 aaKnown RBP20.59■□□□□ 0.89
SMCO4-206ENST00000596676 PCDH11XQ9BZA7 1347 aa20.58■□□□□ 0.89
SMCO4-206ENST00000596676 PCDH11YQ9BZA8 1340 aa20.58■□□□□ 0.89
SMCO4-206ENST00000596676 PTF1AQ7RTS3 328 aa20.58■□□□□ 0.89
SMCO4-206ENST00000596676 RUNDC1Q96C34 613 aa20.57■□□□□ 0.88
SMCO4-206ENST00000596676 ACSBG1Q96GR2 724 aa20.57■□□□□ 0.88
SMCO4-206ENST00000596676 MPRIPQ6WCQ1 1025 aa20.56■□□□□ 0.88
SMCO4-206ENST00000596676 IFNL2Q8IZJ0 200 aa20.56■□□□□ 0.88
SMCO4-206ENST00000596676 LGR6Q9HBX8 967 aa20.55■□□□□ 0.88
SMCO4-206ENST00000596676 MAPK8IP3Q9UPT6 1336 aa20.54■□□□□ 0.88
SMCO4-206ENST00000596676 APAF1O14727 1248 aa20.54■□□□□ 0.88
SMCO4-206ENST00000596676 KCNQ2O43526 872 aa20.54■□□□□ 0.88
SMCO4-206ENST00000596676 NEUROD2Q15784 382 aa20.54■□□□□ 0.88
SMCO4-206ENST00000596676 NFE2L2Q16236 605 aa20.54■□□□□ 0.88
SMCO4-206ENST00000596676 C1orf141Q5JVX7 400 aa20.54■□□□□ 0.88
SMCO4-206ENST00000596676 PNNQ9H307 717 aaKnown RBP20.54■□□□□ 0.88
SMCO4-206ENST00000596676 KAT6BQ8WYB5 2073 aa20.54■□□□□ 0.88
SMCO4-206ENST00000596676 TMPOP42166 694 aaKnown RBP20.53■□□□□ 0.88
SMCO4-206ENST00000596676 DCTN1Q14203 1278 aa20.53■□□□□ 0.88
SMCO4-206ENST00000596676 NKX1-1Q15270 411 aaPredicted RBP20.53■□□□□ 0.88
SMCO4-206ENST00000596676 AKAP4Q5JQC9 854 aa20.53■□□□□ 0.88
SMCO4-206ENST00000596676 GAS2L2Q8NHY3 880 aa20.53■□□□□ 0.88
SMCO4-206ENST00000596676 KDM6AO15550 1401 aaPredicted RBP20.53■□□□□ 0.88
SMCO4-206ENST00000596676 DLG5Q8TDM6 1919 aa20.52■□□□□ 0.88
SMCO4-206ENST00000596676 TOGARAM1Q9Y4F4 1720 aa20.52■□□□□ 0.88
SMCO4-206ENST00000596676 PLEKHG2Q9H7P9 1386 aa20.51■□□□□ 0.87
SMCO4-206ENST00000596676 NEFMP07197 916 aa20.51■□□□□ 0.87
SMCO4-206ENST00000596676 FAM196AQ6ZSG2 479 aa20.51■□□□□ 0.87
SMCO4-206ENST00000596676 MCM10Q7L590 875 aa20.51■□□□□ 0.87
SMCO4-206ENST00000596676 IL17REQ8NFR9 667 aa20.51■□□□□ 0.87
SMCO4-206ENST00000596676 MAP3K5Q99683 1374 aa20.5■□□□□ 0.87
SMCO4-206ENST00000596676 EP400Q96L91 3159 aa20.5■□□□□ 0.87
SMCO4-206ENST00000596676 GNAT3A8MTJ3 354 aa20.5■□□□□ 0.87
SMCO4-206ENST00000596676 RNMTO43148 476 aaKnown RBP20.5■□□□□ 0.87
SMCO4-206ENST00000596676 TRIM37O94972 964 aa20.5■□□□□ 0.87
SMCO4-206ENST00000596676 PRIM1P49642 420 aaKnown RBP20.5■□□□□ 0.87
SMCO4-206ENST00000596676 RIPK4P57078 832 aa20.5■□□□□ 0.87
SMCO4-206ENST00000596676 THUMPD2Q9BTF0 503 aaKnown RBP20.5■□□□□ 0.87
SMCO4-206ENST00000596676 SALL2Q9Y467 1007 aaPredicted RBP20.5■□□□□ 0.87
SMCO4-206ENST00000596676 SBF2Q86WG5 1849 aa20.5■□□□□ 0.87
SMCO4-206ENST00000596676 DOT1LQ8TEK3 1739 aa20.5■□□□□ 0.87
SMCO4-206ENST00000596676 SYTL4Q96C24 671 aaPredicted RBP20.48■□□□□ 0.87
SMCO4-206ENST00000596676 DCAF5Q96JK2 942 aa20.48■□□□□ 0.87
SMCO4-206ENST00000596676 VIRMAQ69YN4 1812 aaKnown RBP20.48■□□□□ 0.87
SMCO4-206ENST00000596676 TRIM35Q9UPQ4 493 aa20.47■□□□□ 0.87
SMCO4-206ENST00000596676 SCN11AQ9UI33 1791 aa20.46■□□□□ 0.87
SMCO4-206ENST00000596676 ITGB4P16144 1822 aa20.46■□□□□ 0.87
SMCO4-206ENST00000596676 BCL9O00512 1426 aa20.45■□□□□ 0.86
SMCO4-206ENST00000596676 HSP90AB1P08238 724 aaKnown RBP20.45■□□□□ 0.86
SMCO4-206ENST00000596676 PIGBQ92521 554 aa20.45■□□□□ 0.86
SMCO4-206ENST00000596676 NFATC2IPQ8NCF5 419 aa20.44■□□□□ 0.86
SMCO4-206ENST00000596676 ADAMTS7Q9UKP4 1686 aa20.44■□□□□ 0.86
SMCO4-206ENST00000596676 RTF1Q92541 710 aaKnown RBP20.43■□□□□ 0.86
SMCO4-206ENST00000596676 NHSQ6T4R5 1651 aa20.42■□□□□ 0.86
SMCO4-206ENST00000596676 CABP4P57796 275 aa20.42■□□□□ 0.86
SMCO4-206ENST00000596676 UPF1Q92900 1129 aaKnown RBP eCLIP20.42■□□□□ 0.86
SMCO4-206ENST00000596676 BCL11BQ9C0K0 894 aaPredicted RBP20.42■□□□□ 0.86
SMCO4-206ENST00000596676 ERVV-2B6SEH9 535 aa20.41■□□□□ 0.86
SMCO4-206ENST00000596676 SLC52A2Q9HAB3 445 aa20.41■□□□□ 0.86
SMCO4-206ENST00000596676 CEMIPQ8WUJ3 1361 aa20.41■□□□□ 0.86
SMCO4-206ENST00000596676 BTAF1O14981 1849 aa20.4■□□□□ 0.86
SMCO4-206ENST00000596676 HTATSF1O43719 755 aaKnown RBP20.4■□□□□ 0.86
SMCO4-206ENST00000596676 TMOD3Q9NYL9 352 aa20.4■□□□□ 0.86
SMCO4-206ENST00000596676 MIS18AQ9NYP9 233 aa20.4■□□□□ 0.86
SMCO4-206ENST00000596676 ASAP1Q9ULH1 1129 aa20.4■□□□□ 0.86
SMCO4-206ENST00000596676 TNS1Q9HBL0 1735 aaKnown RBP20.39■□□□□ 0.86
SMCO4-206ENST00000596676 APBA3O96018 575 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms