RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 RCAN3Q9UKA8 241 aa13.86□□□□□ -0.19
SEH1L-208ENST00000590843 ANKRD18BA2A2Z9 1011 aa13.86□□□□□ -0.19
SEH1L-208ENST00000590843 CCDC125Q86Z20 511 aa13.86□□□□□ -0.19
SEH1L-208ENST00000590843 CABP5Q9NP86 173 aa13.86□□□□□ -0.19
SEH1L-208ENST00000590843 RAI14Q9P0K7 980 aa13.86□□□□□ -0.19
SEH1L-208ENST00000590843 PIK3R4Q99570 1358 aa13.86□□□□□ -0.19
SEH1L-208ENST00000590843 PTPN23Q9H3S7 1636 aa13.86□□□□□ -0.19
SEH1L-208ENST00000590843 ADGRF5Q8IZF2 1346 aa13.86□□□□□ -0.19
SEH1L-208ENST00000590843 ZNF335Q9H4Z2 1342 aaPredicted RBP13.86□□□□□ -0.19
SEH1L-208ENST00000590843 ABCA5Q8WWZ7 1642 aa13.86□□□□□ -0.19
SEH1L-208ENST00000590843 SENP3-EIF4A1A0A087X0R7 540 aa13.86□□□□□ -0.19
SEH1L-208ENST00000590843 HSCBQ8IWL3 235 aa13.86□□□□□ -0.19
SEH1L-208ENST00000590843 CABLES1Q8TDN4 633 aa13.86□□□□□ -0.19
SEH1L-208ENST00000590843 PPIP5K1Q6PFW1 1433 aa13.85□□□□□ -0.19
SEH1L-208ENST00000590843 NFE2L2Q16236 605 aa13.85□□□□□ -0.19
SEH1L-208ENST00000590843 DZIP1Q86YF9 867 aaKnown RBP13.85□□□□□ -0.19
SEH1L-208ENST00000590843 APAF1O14727 1248 aa13.85□□□□□ -0.19
SEH1L-208ENST00000590843 BRD4O60885 1362 aaPredicted RBP13.85□□□□□ -0.19
SEH1L-208ENST00000590843 SLC5A1P13866 664 aa13.85□□□□□ -0.19
SEH1L-208ENST00000590843 OTUD7BQ6GQQ9 843 aa13.85□□□□□ -0.19
SEH1L-208ENST00000590843 NME9Q86XW9 330 aa13.85□□□□□ -0.19
SEH1L-208ENST00000590843 UNC5CLQ8IV45 518 aa13.85□□□□□ -0.19
SEH1L-208ENST00000590843 ZC3H12CQ9C0D7 883 aaKnown RBP13.85□□□□□ -0.19
SEH1L-208ENST00000590843 DNAI2Q9GZS0 605 aa13.85□□□□□ -0.19
SEH1L-208ENST00000590843 SCAF11Q99590 1463 aaKnown RBP13.84□□□□□ -0.19
SEH1L-208ENST00000590843 GSTO1P78417 241 aa13.84□□□□□ -0.19
SEH1L-208ENST00000590843 CSPP1Q1MSJ5 1256 aa13.84□□□□□ -0.19
SEH1L-208ENST00000590843 ZGPATQ8N5A5 531 aaKnown RBP13.84□□□□□ -0.19
SEH1L-208ENST00000590843 HLA-DOAP06340 250 aa13.84□□□□□ -0.19
SEH1L-208ENST00000590843 IFIT5Q13325 482 aaKnown RBP13.84□□□□□ -0.19
SEH1L-208ENST00000590843 SAFBQ15424 915 aaKnown RBP eCLIP13.84□□□□□ -0.19
SEH1L-208ENST00000590843 SPON1Q9HCB6 807 aa13.84□□□□□ -0.19
SEH1L-208ENST00000590843 SPDYE4A6NLX3 237 aa13.84□□□□□ -0.19
SEH1L-208ENST00000590843 GRIN3BO60391 1043 aa13.84□□□□□ -0.19
SEH1L-208ENST00000590843 NLGN1Q8N2Q7 840 aa13.84□□□□□ -0.19
SEH1L-208ENST00000590843 NSD3Q9BZ95 1437 aa13.84□□□□□ -0.19
SEH1L-208ENST00000590843 ABCA8O94911 1581 aa13.84□□□□□ -0.19
SEH1L-208ENST00000590843 CTTNBP2Q8WZ74 1663 aa13.83□□□□□ -0.19
SEH1L-208ENST00000590843 ARHGAP27Q6ZUM4 889 aa13.83□□□□□ -0.19
SEH1L-208ENST00000590843 FEZ1Q99689 392 aa13.83□□□□□ -0.19
SEH1L-208ENST00000590843 LRP2BPQ9P2M1 347 aa13.83□□□□□ -0.19
SEH1L-208ENST00000590843 NBPF1Q3BBV0 1214 aa13.83□□□□□ -0.2
SEH1L-208ENST00000590843 CLUAP1Q96AJ1 413 aa13.83□□□□□ -0.2
SEH1L-208ENST00000590843 RILPL2Q969X0 211 aa13.83□□□□□ -0.2
SEH1L-208ENST00000590843 DCAF5Q96JK2 942 aa13.83□□□□□ -0.2
SEH1L-208ENST00000590843 BCS1LQ9Y276 419 aa13.83□□□□□ -0.2
SEH1L-208ENST00000590843 METTL24Q5JXM2 366 aa13.83□□□□□ -0.2
SEH1L-208ENST00000590843 AFF2P51816 1311 aa13.83□□□□□ -0.2
SEH1L-208ENST00000590843 CNBD1Q8NA66 436 aa13.82□□□□□ -0.2
SEH1L-208ENST00000590843 SIRT1Q96EB6 747 aa13.82□□□□□ -0.2
SEH1L-208ENST00000590843 TRAF1Q13077 416 aa13.82□□□□□ -0.2
SEH1L-208ENST00000590843 ALDH1B1P30837 517 aa13.82□□□□□ -0.2
SEH1L-208ENST00000590843 PUS7Q96PZ0 661 aaKnown RBP13.82□□□□□ -0.2
SEH1L-208ENST00000590843 TRIM21P19474 475 aaKnown RBP13.82□□□□□ -0.2
SEH1L-208ENST00000590843 TPM4P67936 248 aa13.82□□□□□ -0.2
SEH1L-208ENST00000590843 FAM184AQ8NB25 1140 aa13.82□□□□□ -0.2
SEH1L-208ENST00000590843 AAMPQ13685 434 aa13.81□□□□□ -0.2
SEH1L-208ENST00000590843 TWISTNBQ3B726 338 aaPredicted RBP13.81□□□□□ -0.2
SEH1L-208ENST00000590843 BAG3O95817 575 aa13.81□□□□□ -0.2
SEH1L-208ENST00000590843 THRAP3Q9Y2W1 955 aaKnown RBP13.81□□□□□ -0.2
SEH1L-208ENST00000590843 CHD1O14646 1710 aa13.81□□□□□ -0.2
SEH1L-208ENST00000590843 H7C1D1 291 aa13.81□□□□□ -0.2
SEH1L-208ENST00000590843 ZNF428Q96B54 188 aa13.81□□□□□ -0.2
SEH1L-208ENST00000590843 GJA3Q9Y6H8 435 aa13.81□□□□□ -0.2
SEH1L-208ENST00000590843 UGGT1Q9NYU2 1555 aa13.81□□□□□ -0.2
SEH1L-208ENST00000590843 PIK3C2GO75747 1445 aa13.81□□□□□ -0.2
SEH1L-208ENST00000590843 TNIP1Q15025 636 aa13.8□□□□□ -0.2
SEH1L-208ENST00000590843 NIM1KQ8IY84 436 aa13.8□□□□□ -0.2
SEH1L-208ENST00000590843 CRBNQ96SW2 442 aa13.8□□□□□ -0.2
SEH1L-208ENST00000590843 PLEKHG1Q9ULL1 1385 aa13.8□□□□□ -0.2
SEH1L-208ENST00000590843 DNAJC2Q99543 621 aaKnown RBP13.8□□□□□ -0.2
SEH1L-208ENST00000590843 EHMT1Q9H9B1 1298 aa13.8□□□□□ -0.2
SEH1L-208ENST00000590843 SHANK2Q9UPX8 1470 aa13.8□□□□□ -0.2
SEH1L-208ENST00000590843 ZNF804AQ7Z570 1209 aa13.8□□□□□ -0.2
SEH1L-208ENST00000590843 ANKRD18AQ8IVF6 992 aa13.8□□□□□ -0.2
SEH1L-208ENST00000590843 USHBP1Q8N6Y0 703 aa13.8□□□□□ -0.2
SEH1L-208ENST00000590843 TPM2P07951 284 aa13.79□□□□□ -0.2
SEH1L-208ENST00000590843 USP5P45974 858 aa13.79□□□□□ -0.2
SEH1L-208ENST00000590843 SF3A1Q15459 793 aaKnown RBP13.79□□□□□ -0.2
SEH1L-208ENST00000590843 DBF4Q9UBU7 674 aaPredicted RBP13.79□□□□□ -0.2
SEH1L-208ENST00000590843 TSPOAP1O95153 1857 aa13.79□□□□□ -0.2
SEH1L-208ENST00000590843 RBM27Q9P2N5 1060 aaKnown RBP13.79□□□□□ -0.2
SEH1L-208ENST00000590843 SEPT12Q8IYM1 358 aa13.79□□□□□ -0.2
SEH1L-208ENST00000590843 CNKSR1Q969H4 720 aa13.79□□□□□ -0.2
SEH1L-208ENST00000590843 UTP14AQ9BVJ6 771 aaKnown RBP13.79□□□□□ -0.2
SEH1L-208ENST00000590843 MYCNP04198 464 aaPredicted RBP13.79□□□□□ -0.2
SEH1L-208ENST00000590843 POLR3DP05423 398 aaPredicted RBP13.79□□□□□ -0.2
SEH1L-208ENST00000590843 CT47B1P0C2W7 299 aaPredicted RBP13.79□□□□□ -0.2
SEH1L-208ENST00000590843 NIP7Q9Y221 180 aaKnown RBP eCLIP13.78□□□□□ -0.2
SEH1L-208ENST00000590843 DZIP1LQ8IYY4 767 aaKnown RBP13.78□□□□□ -0.2
SEH1L-208ENST00000590843 ANKRD2Q9GZV1 360 aa13.78□□□□□ -0.2
SEH1L-208ENST00000590843 DISP1Q96F81 1524 aa13.78□□□□□ -0.2
SEH1L-208ENST00000590843 AKAP4Q5JQC9 854 aa13.78□□□□□ -0.2
SEH1L-208ENST00000590843 IL27Q8NEV9 243 aa13.78□□□□□ -0.2
SEH1L-208ENST00000590843 GNAI2P04899 355 aa13.77□□□□□ -0.2
SEH1L-208ENST00000590843 PARP10Q53GL7 1025 aa13.77□□□□□ -0.2
SEH1L-208ENST00000590843 LARGE2Q8N3Y3 721 aa13.77□□□□□ -0.2
SEH1L-208ENST00000590843 NPATQ14207 1427 aa13.77□□□□□ -0.2
SEH1L-208ENST00000590843 MLH3Q9UHC1 1453 aa13.77□□□□□ -0.21
SEH1L-208ENST00000590843 RIMBP3CA6NJZ7 1639 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms