RNA–Protein interactions for RNA: ENST00000588954.5

ZNF440-206, Transcript of zinc finger protein 440, humanhuman

TSL 5

Gene ZNF440, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-206ENST00000588954 RGS12O14924 1447 aa12.39□□□□□ -0.43
ZNF440-206ENST00000588954 EXOC5O00471 708 aa12.39□□□□□ -0.43
ZNF440-206ENST00000588954 TATP17735 454 aaPredicted RBP12.39□□□□□ -0.43
ZNF440-206ENST00000588954 IL13P35225 146 aa12.39□□□□□ -0.43
ZNF440-206ENST00000588954 PDE3BQ13370 1112 aa12.39□□□□□ -0.43
ZNF440-206ENST00000588954 DDB1Q16531 1140 aa12.39□□□□□ -0.43
ZNF440-206ENST00000588954 USHBP1Q8N6Y0 703 aa12.39□□□□□ -0.43
ZNF440-206ENST00000588954 U2SURPO15042 1029 aaKnown RBP12.38□□□□□ -0.43
ZNF440-206ENST00000588954 KRT27Q7Z3Y8 459 aa12.38□□□□□ -0.43
ZNF440-206ENST00000588954 ILDR2Q71H61 639 aa12.37□□□□□ -0.43
ZNF440-206ENST00000588954 IGSF1Q8N6C5 1336 aa12.37□□□□□ -0.43
ZNF440-206ENST00000588954 SULT6B1Q6IMI4 303 aa12.36□□□□□ -0.43
ZNF440-206ENST00000588954 DISP2A7MBM2 1401 aa12.35□□□□□ -0.43
ZNF440-206ENST00000588954 U2AF1L5P0DN76 240 aaPredicted RBP12.34□□□□□ -0.43
ZNF440-206ENST00000588954 U2AF1Q01081 240 aaKnown RBP eCLIP12.34□□□□□ -0.43
ZNF440-206ENST00000588954 ZCRB1Q8TBF4 217 aaKnown RBP12.34□□□□□ -0.43
ZNF440-206ENST00000588954 SPG7Q9UQ90 795 aa12.34□□□□□ -0.43
ZNF440-206ENST00000588954 THSD7AQ9UPZ6 1657 aa12.34□□□□□ -0.43
ZNF440-206ENST00000588954 RGPD2P0DJD1 1756 aa12.33□□□□□ -0.44
ZNF440-206ENST00000588954 HMOX1P09601 288 aa12.33□□□□□ -0.44
ZNF440-206ENST00000588954 DSG3P32926 999 aa12.33□□□□□ -0.44
ZNF440-206ENST00000588954 PLEKHO1Q53GL0 409 aaPredicted RBP12.33□□□□□ -0.44
ZNF440-206ENST00000588954 FAM196AQ6ZSG2 479 aa12.33□□□□□ -0.44
ZNF440-206ENST00000588954 DDX54Q8TDD1 881 aaKnown RBP12.33□□□□□ -0.44
ZNF440-206ENST00000588954 NCAPD2Q15021 1401 aa12.33□□□□□ -0.44
ZNF440-206ENST00000588954 COL3A1P02461 1466 aaPredicted RBP12.33□□□□□ -0.44
ZNF440-206ENST00000588954 PARP4Q9UKK3 1724 aaKnown RBP12.32□□□□□ -0.44
ZNF440-206ENST00000588954 OVOS2A0A0G2JMS6 1433 aa12.32□□□□□ -0.44
ZNF440-206ENST00000588954 TNS2Q63HR2 1409 aa12.32□□□□□ -0.44
ZNF440-206ENST00000588954 ABCB7O75027 752 aa12.32□□□□□ -0.44
ZNF440-206ENST00000588954 NEFMP07197 916 aa12.32□□□□□ -0.44
ZNF440-206ENST00000588954 WDR43Q15061 677 aaKnown RBP eCLIP12.32□□□□□ -0.44
ZNF440-206ENST00000588954 AMOTQ4VCS5 1084 aa12.32□□□□□ -0.44
ZNF440-206ENST00000588954 DIEXFQ68CQ4 756 aaKnown RBP12.32□□□□□ -0.44
ZNF440-206ENST00000588954 AEBP1Q8IUX7 1158 aa12.32□□□□□ -0.44
ZNF440-206ENST00000588954 PNNQ9H307 717 aaKnown RBP12.32□□□□□ -0.44
ZNF440-206ENST00000588954 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.32□□□□□ -0.44
ZNF440-206ENST00000588954 MEGF6O75095 1541 aa12.32□□□□□ -0.44
ZNF440-206ENST00000588954 PLEKHG2Q9H7P9 1386 aa12.31□□□□□ -0.44
ZNF440-206ENST00000588954 PCDH11XQ9BZA7 1347 aa12.31□□□□□ -0.44
ZNF440-206ENST00000588954 PCDH11YQ9BZA8 1340 aa12.31□□□□□ -0.44
ZNF440-206ENST00000588954 KDRP35968 1356 aa12.3□□□□□ -0.44
ZNF440-206ENST00000588954 WNK3Q9BYP7 1800 aa12.3□□□□□ -0.44
ZNF440-206ENST00000588954 FCHSD2O94868 740 aa12.3□□□□□ -0.44
ZNF440-206ENST00000588954 POLA2Q14181 598 aa12.3□□□□□ -0.44
ZNF440-206ENST00000588954 FAM182BQ5T319 152 aa12.3□□□□□ -0.44
ZNF440-206ENST00000588954 MARCH10Q8NA82 808 aaPredicted RBP12.3□□□□□ -0.44
ZNF440-206ENST00000588954 C1orf141Q5JVX7 400 aa12.29□□□□□ -0.44
ZNF440-206ENST00000588954 BRWD3Q6RI45 1802 aa12.29□□□□□ -0.44
ZNF440-206ENST00000588954 LRRC37A3O60309 1634 aa12.29□□□□□ -0.44
ZNF440-206ENST00000588954 RGPD1P0DJD0 1748 aa12.28□□□□□ -0.44
ZNF440-206ENST00000588954 PRKAR2BP31323 418 aa12.28□□□□□ -0.44
ZNF440-206ENST00000588954 SF3B2Q13435 895 aaKnown RBP12.28□□□□□ -0.44
ZNF440-206ENST00000588954 ZNF530Q6P9A1 599 aaPredicted RBP12.28□□□□□ -0.44
ZNF440-206ENST00000588954 CCDC125Q86Z20 511 aa12.28□□□□□ -0.44
ZNF440-206ENST00000588954 IFNL2Q8IZJ0 200 aa12.28□□□□□ -0.44
ZNF440-206ENST00000588954 MRS2Q9HD23 443 aa12.28□□□□□ -0.44
ZNF440-206ENST00000588954 HSP90AB1P08238 724 aaKnown RBP12.27□□□□□ -0.45
ZNF440-206ENST00000588954 GAS2L2Q8NHY3 880 aa12.27□□□□□ -0.45
ZNF440-206ENST00000588954 RSPH6AQ9H0K4 717 aa12.27□□□□□ -0.45
ZNF440-206ENST00000588954 CYP27B1O15528 508 aa12.26□□□□□ -0.45
ZNF440-206ENST00000588954 MAPK8IP3Q9UPT6 1336 aa12.26□□□□□ -0.45
ZNF440-206ENST00000588954 SOCS7O14512 581 aa12.25□□□□□ -0.45
ZNF440-206ENST00000588954 PHKG2P15735 406 aa12.25□□□□□ -0.45
ZNF440-206ENST00000588954 AKAP4Q5JQC9 854 aa12.25□□□□□ -0.45
ZNF440-206ENST00000588954 BCL9O00512 1426 aa12.25□□□□□ -0.45
ZNF440-206ENST00000588954 TRIM37O94972 964 aa12.24□□□□□ -0.45
ZNF440-206ENST00000588954 NKX1-1Q15270 411 aaPredicted RBP12.24□□□□□ -0.45
ZNF440-206ENST00000588954 MTHFSDQ2M296 383 aaKnown RBP12.24□□□□□ -0.45
ZNF440-206ENST00000588954 UPF1Q92900 1129 aaKnown RBP eCLIP12.24□□□□□ -0.45
ZNF440-206ENST00000588954 ADAMTS8Q9UP79 889 aa12.24□□□□□ -0.45
ZNF440-206ENST00000588954 PKD1L3Q7Z443 1732 aa12.23□□□□□ -0.45
ZNF440-206ENST00000588954 SYTL4Q96C24 671 aaPredicted RBP12.23□□□□□ -0.45
ZNF440-206ENST00000588954 ACSBG1Q96GR2 724 aa12.23□□□□□ -0.45
ZNF440-206ENST00000588954 DCAF5Q96JK2 942 aa12.23□□□□□ -0.45
ZNF440-206ENST00000588954 PHACTR3Q96KR7 559 aa12.23□□□□□ -0.45
ZNF440-206ENST00000588954 BCL11BQ9C0K0 894 aaPredicted RBP12.23□□□□□ -0.45
ZNF440-206ENST00000588954 CCER2I3L3R5 266 aa12.22□□□□□ -0.45
ZNF440-206ENST00000588954 CCDC184Q52MB2 194 aa12.22□□□□□ -0.45
ZNF440-206ENST00000588954 RTF1Q92541 710 aaKnown RBP12.22□□□□□ -0.45
ZNF440-206ENST00000588954 GNAT3A8MTJ3 354 aa12.21□□□□□ -0.45
ZNF440-206ENST00000588954 APBA3O96018 575 aa12.21□□□□□ -0.45
ZNF440-206ENST00000588954 BAG6P46379 1132 aa12.21□□□□□ -0.45
ZNF440-206ENST00000588954 PRIM1P49642 420 aaKnown RBP12.21□□□□□ -0.45
ZNF440-206ENST00000588954 PNISRQ8TF01 805 aaKnown RBP12.21□□□□□ -0.45
ZNF440-206ENST00000588954 RUNDC1Q96C34 613 aa12.21□□□□□ -0.45
ZNF440-206ENST00000588954 PLEKHF1Q96S99 279 aa12.21□□□□□ -0.45
ZNF440-206ENST00000588954 KAT6BQ8WYB5 2073 aa12.21□□□□□ -0.45
ZNF440-206ENST00000588954 ERVV-2B6SEH9 535 aa12.2□□□□□ -0.46
ZNF440-206ENST00000588954 KCNQ2O43526 872 aa12.2□□□□□ -0.46
ZNF440-206ENST00000588954 MPRIPQ6WCQ1 1025 aa12.2□□□□□ -0.46
ZNF440-206ENST00000588954 CCDC146Q8IYE0 955 aa12.2□□□□□ -0.46
ZNF440-206ENST00000588954 TMOD3Q9NYL9 352 aa12.2□□□□□ -0.46
ZNF440-206ENST00000588954 SHANK3Q9BYB0 1731 aa12.2□□□□□ -0.46
ZNF440-206ENST00000588954 MAP3K5Q99683 1374 aa12.19□□□□□ -0.46
ZNF440-206ENST00000588954 CABP4P57796 275 aa12.19□□□□□ -0.46
ZNF440-206ENST00000588954 MKRN4PQ13434 485 aaPredicted RBP12.19□□□□□ -0.46
ZNF440-206ENST00000588954 NFE2L2Q16236 605 aa12.19□□□□□ -0.46
ZNF440-206ENST00000588954 FAM9BQ8IZU0 186 aa12.19□□□□□ -0.46
ZNF440-206ENST00000588954 MIER1Q8N108 512 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms