RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 PNNQ9H307 717 aaKnown RBP22.48■■□□□ 1.19
HMG20B-215ENST00000585741 NUP188Q5SRE5 1749 aa22.48■■□□□ 1.19
HMG20B-215ENST00000585741 COL3A1P02461 1466 aaPredicted RBP22.47■■□□□ 1.19
HMG20B-215ENST00000585741 CRB1P82279 1406 aa22.47■■□□□ 1.19
HMG20B-215ENST00000585741 COL18A1P39060 1754 aa22.46■■□□□ 1.19
HMG20B-215ENST00000585741 NLRP2Q9NX02 1062 aa22.46■■□□□ 1.19
HMG20B-215ENST00000585741 ERBB3P21860 1342 aa22.45■■□□□ 1.18
HMG20B-215ENST00000585741 TOM1L2Q6ZVM7 507 aa22.44■■□□□ 1.18
HMG20B-215ENST00000585741 ADAMTS8Q9UP79 889 aa22.44■■□□□ 1.18
HMG20B-215ENST00000585741 EYA1Q99502 592 aa22.43■■□□□ 1.18
HMG20B-215ENST00000585741 HMOX1P09601 288 aa22.42■■□□□ 1.18
HMG20B-215ENST00000585741 SULT6B1Q6IMI4 303 aa22.42■■□□□ 1.18
HMG20B-215ENST00000585741 WDR17Q8IZU2 1322 aa22.41■■□□□ 1.18
HMG20B-215ENST00000585741 FCHSD2O94868 740 aa22.41■■□□□ 1.18
HMG20B-215ENST00000585741 LRRC37A3O60309 1634 aa22.41■■□□□ 1.18
HMG20B-215ENST00000585741 MAPK8IP3Q9UPT6 1336 aa22.4■■□□□ 1.18
HMG20B-215ENST00000585741 IGSF1Q8N6C5 1336 aa22.39■■□□□ 1.18
HMG20B-215ENST00000585741 NBPF6Q5VWK0 638 aa22.39■■□□□ 1.17
HMG20B-215ENST00000585741 NBPF4Q96M43 638 aa22.39■■□□□ 1.17
HMG20B-215ENST00000585741 OVOS2A0A0G2JMS6 1433 aa22.39■■□□□ 1.17
HMG20B-215ENST00000585741 PTF1AQ7RTS3 328 aa22.38■■□□□ 1.17
HMG20B-215ENST00000585741 USHBP1Q8N6Y0 703 aa22.38■■□□□ 1.17
HMG20B-215ENST00000585741 PRKAR2BP31323 418 aa22.37■■□□□ 1.17
HMG20B-215ENST00000585741 CCDC146Q8IYE0 955 aa22.37■■□□□ 1.17
HMG20B-215ENST00000585741 RGPD5Q99666 1765 aa22.37■■□□□ 1.17
HMG20B-215ENST00000585741 SBF2Q86WG5 1849 aa22.36■■□□□ 1.17
HMG20B-215ENST00000585741 RUNDC1Q96C34 613 aa22.36■■□□□ 1.17
HMG20B-215ENST00000585741 YTHDC1Q96MU7 727 aaKnown RBP22.36■■□□□ 1.17
HMG20B-215ENST00000585741 NBPF14Q5TI25 921 aa22.35■■□□□ 1.17
HMG20B-215ENST00000585741 AEBP1Q8IUX7 1158 aa22.35■■□□□ 1.17
HMG20B-215ENST00000585741 RAPGEF4Q8WZA2 1011 aa22.35■■□□□ 1.17
HMG20B-215ENST00000585741 WNK3Q9BYP7 1800 aa22.35■■□□□ 1.17
HMG20B-215ENST00000585741 BCL9O00512 1426 aa22.34■■□□□ 1.17
HMG20B-215ENST00000585741 PLSCR1O15162 318 aa22.34■■□□□ 1.17
HMG20B-215ENST00000585741 DDB1Q16531 1140 aa22.34■■□□□ 1.17
HMG20B-215ENST00000585741 MARCH10Q8NA82 808 aaPredicted RBP22.34■■□□□ 1.17
HMG20B-215ENST00000585741 CARD10Q9BWT7 1032 aa22.34■■□□□ 1.17
HMG20B-215ENST00000585741 RSPH6AQ9H0K4 717 aa22.34■■□□□ 1.17
HMG20B-215ENST00000585741 RGPD3A6NKT7 1758 aaPredicted RBP22.34■■□□□ 1.17
HMG20B-215ENST00000585741 RGPD4Q7Z3J3 1758 aa22.34■■□□□ 1.17
HMG20B-215ENST00000585741 FAM208AQ9UK61 1670 aaKnown RBP22.33■■□□□ 1.17
HMG20B-215ENST00000585741 TATP17735 454 aaPredicted RBP22.32■■□□□ 1.16
HMG20B-215ENST00000585741 PROM2Q8N271 834 aa22.32■■□□□ 1.16
HMG20B-215ENST00000585741 HNRNPUQ00839 825 aaKnown RBP eCLIP22.31■■□□□ 1.16
HMG20B-215ENST00000585741 BCL11BQ9C0K0 894 aaPredicted RBP22.31■■□□□ 1.16
HMG20B-215ENST00000585741 ANO8Q9HCE9 1232 aaPredicted RBP22.31■■□□□ 1.16
HMG20B-215ENST00000585741 KDRP35968 1356 aa22.3■■□□□ 1.16
HMG20B-215ENST00000585741 CDCA7Q9BWT1 371 aaPredicted RBP22.29■■□□□ 1.16
HMG20B-215ENST00000585741 KCNQ2O43526 872 aa22.28■■□□□ 1.16
HMG20B-215ENST00000585741 PLEKHO1Q53GL0 409 aaPredicted RBP22.28■■□□□ 1.16
HMG20B-215ENST00000585741 APAF1O14727 1248 aa22.27■■□□□ 1.16
HMG20B-215ENST00000585741 IL2RBP14784 551 aa22.27■■□□□ 1.16
HMG20B-215ENST00000585741 PLEKHF1Q96S99 279 aa22.27■■□□□ 1.16
HMG20B-215ENST00000585741 SPON1Q9HCB6 807 aa22.27■■□□□ 1.16
HMG20B-215ENST00000585741 RGPD2P0DJD1 1756 aa22.26■■□□□ 1.15
HMG20B-215ENST00000585741 CASZ1Q86V15 1759 aa22.26■■□□□ 1.15
HMG20B-215ENST00000585741 NEUROD2Q15784 382 aa22.26■■□□□ 1.15
HMG20B-215ENST00000585741 AMOTQ4VCS5 1084 aa22.26■■□□□ 1.15
HMG20B-215ENST00000585741 GAS2L2Q8NHY3 880 aa22.26■■□□□ 1.15
HMG20B-215ENST00000585741 PDGFDQ9GZP0 370 aaPredicted RBP22.25■■□□□ 1.15
HMG20B-215ENST00000585741 SPG7Q9UQ90 795 aa22.25■■□□□ 1.15
HMG20B-215ENST00000585741 SALL2Q9Y467 1007 aaPredicted RBP22.25■■□□□ 1.15
HMG20B-215ENST00000585741 SENP3-EIF4A1A0A087X0R7 540 aa22.24■■□□□ 1.15
HMG20B-215ENST00000585741 PHACTR3Q96KR7 559 aa22.24■■□□□ 1.15
HMG20B-215ENST00000585741 NCAPD2Q15021 1401 aa22.23■■□□□ 1.15
HMG20B-215ENST00000585741 NFE2L2Q16236 605 aa22.23■■□□□ 1.15
HMG20B-215ENST00000585741 NGEFQ8N5V2 710 aa22.23■■□□□ 1.15
HMG20B-215ENST00000585741 RRP7AQ9Y3A4 280 aaKnown RBP22.23■■□□□ 1.15
HMG20B-215ENST00000585741 RIPK4P57078 832 aa22.22■■□□□ 1.15
HMG20B-215ENST00000585741 TMPOP42166 694 aaKnown RBP22.21■■□□□ 1.15
HMG20B-215ENST00000585741 LMOD3Q0VAK6 560 aa22.21■■□□□ 1.15
HMG20B-215ENST00000585741 C1orf141Q5JVX7 400 aa22.21■■□□□ 1.15
HMG20B-215ENST00000585741 EXOC5O00471 708 aa22.2■■□□□ 1.14
HMG20B-215ENST00000585741 MTHFSDQ2M296 383 aaKnown RBP22.2■■□□□ 1.14
HMG20B-215ENST00000585741 ZNF530Q6P9A1 599 aaPredicted RBP22.2■■□□□ 1.14
HMG20B-215ENST00000585741 RTF1Q92541 710 aaKnown RBP22.2■■□□□ 1.14
HMG20B-215ENST00000585741 PLEKHG2Q9H7P9 1386 aa22.2■■□□□ 1.14
HMG20B-215ENST00000585741 TNS2Q63HR2 1409 aa22.2■■□□□ 1.14
HMG20B-215ENST00000585741 TXNRD1Q16881 649 aa22.19■■□□□ 1.14
HMG20B-215ENST00000585741 ZCRB1Q8TBF4 217 aaKnown RBP22.19■■□□□ 1.14
HMG20B-215ENST00000585741 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.19■■□□□ 1.14
HMG20B-215ENST00000585741 MEGF6O75095 1541 aa22.18■■□□□ 1.14
HMG20B-215ENST00000585741 PPP1R1BQ9UD71 204 aaPredicted RBP22.17■■□□□ 1.14
HMG20B-215ENST00000585741 PTGER2P43116 358 aa22.16■■□□□ 1.14
HMG20B-215ENST00000585741 PCDH11XQ9BZA7 1347 aa22.15■■□□□ 1.14
HMG20B-215ENST00000585741 PCDH11YQ9BZA8 1340 aa22.15■■□□□ 1.14
HMG20B-215ENST00000585741 GNAT3A8MTJ3 354 aa22.15■■□□□ 1.14
HMG20B-215ENST00000585741 IFNL2Q8IZJ0 200 aa22.15■■□□□ 1.14
HMG20B-215ENST00000585741 YY1P25490 414 aa22.14■■□□□ 1.13
HMG20B-215ENST00000585741 NCBP3Q53F19 620 aaKnown RBP22.14■■□□□ 1.13
HMG20B-215ENST00000585741 AKAP4Q5JQC9 854 aa22.14■■□□□ 1.13
HMG20B-215ENST00000585741 DDX54Q8TDD1 881 aaKnown RBP22.14■■□□□ 1.13
HMG20B-215ENST00000585741 NHSQ6T4R5 1651 aa22.14■■□□□ 1.13
HMG20B-215ENST00000585741 ZBED9Q6R2W3 1325 aa22.13■■□□□ 1.13
HMG20B-215ENST00000585741 ZBTB7AO95365 584 aa22.13■■□□□ 1.13
HMG20B-215ENST00000585741 HSP90AB1P08238 724 aaKnown RBP22.13■■□□□ 1.13
HMG20B-215ENST00000585741 SLC15A2Q16348 729 aa22.13■■□□□ 1.13
HMG20B-215ENST00000585741 MAP3K5Q99683 1374 aa22.12■■□□□ 1.13
HMG20B-215ENST00000585741 HTATSF1O43719 755 aaKnown RBP22.12■■□□□ 1.13
HMG20B-215ENST00000585741 CALD1Q05682 793 aaKnown RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms