RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 FBXO31Q5XUX0 539 aaPredicted RBP8.75□□□□□ -1.01
PTPRM-213ENST00000580949 TBC1D2Q9BYX2 928 aa8.75□□□□□ -1.01
PTPRM-213ENST00000580949 RALGAPBQ86X10 1494 aa8.75□□□□□ -1.01
PTPRM-213ENST00000580949 WASHC2AQ641Q2 1341 aa8.75□□□□□ -1.01
PTPRM-213ENST00000580949 ARHGEF40Q8TER5 1519 aa8.75□□□□□ -1.01
PTPRM-213ENST00000580949 NR1I2O75469 434 aa8.74□□□□□ -1.01
PTPRM-213ENST00000580949 IDI1Q13907 227 aa8.74□□□□□ -1.01
PTPRM-213ENST00000580949 BLOC1S3Q6QNY0 202 aa8.74□□□□□ -1.01
PTPRM-213ENST00000580949 CARD11Q9BXL7 1154 aa8.74□□□□□ -1.01
PTPRM-213ENST00000580949 SPHKAPQ2M3C7 1700 aa8.74□□□□□ -1.01
PTPRM-213ENST00000580949 USP47Q96K76 1375 aa8.73□□□□□ -1.01
PTPRM-213ENST00000580949 CNTLNQ9NXG0 1405 aa8.73□□□□□ -1.01
PTPRM-213ENST00000580949 COPS2P61201 443 aa8.73□□□□□ -1.01
PTPRM-213ENST00000580949 PUS10Q3MIT2 529 aaKnown RBP8.73□□□□□ -1.01
PTPRM-213ENST00000580949 RSPH6AQ9H0K4 717 aa8.73□□□□□ -1.01
PTPRM-213ENST00000580949 ADGRF5Q8IZF2 1346 aa8.73□□□□□ -1.01
PTPRM-213ENST00000580949 GPRASP1Q5JY77 1395 aa8.73□□□□□ -1.01
PTPRM-213ENST00000580949 CAMSAP1Q5T5Y3 1602 aa8.72□□□□□ -1.01
PTPRM-213ENST00000580949 PLEKHG3A1L390 1219 aa8.72□□□□□ -1.01
PTPRM-213ENST00000580949 KCNC4Q03721 635 aa8.72□□□□□ -1.01
PTPRM-213ENST00000580949 ROCK2O75116 1388 aaKnown RBP8.72□□□□□ -1.01
PTPRM-213ENST00000580949 SYNMO15061 1565 aa8.71□□□□□ -1.02
PTPRM-213ENST00000580949 ST20-MTHFSA0A0A6YYL1 179 aa8.71□□□□□ -1.02
PTPRM-213ENST00000580949 ZPR1O75312 459 aa8.71□□□□□ -1.02
PTPRM-213ENST00000580949 GJA5P36382 358 aa8.71□□□□□ -1.02
PTPRM-213ENST00000580949 IFFO2Q5TF58 517 aa8.71□□□□□ -1.02
PTPRM-213ENST00000580949 SCUBE3Q8IX30 993 aa8.71□□□□□ -1.02
PTPRM-213ENST00000580949 SLC27A5Q9Y2P5 690 aa8.71□□□□□ -1.02
PTPRM-213ENST00000580949 ARID4BQ4LE39 1312 aaPredicted RBP8.71□□□□□ -1.02
PTPRM-213ENST00000580949 CCDC7Q96M83 1385 aa8.71□□□□□ -1.02
PTPRM-213ENST00000580949 NEURL4Q96JN8 1562 aa8.7□□□□□ -1.02
PTPRM-213ENST00000580949 MOXD2PA6NHM9 499 aa8.7□□□□□ -1.02
PTPRM-213ENST00000580949 MYSM1Q5VVJ2 828 aa8.7□□□□□ -1.02
PTPRM-213ENST00000580949 ZNF516Q92618 1163 aa8.7□□□□□ -1.02
PTPRM-213ENST00000580949 SLC52A1Q9NWF4 448 aa8.7□□□□□ -1.02
PTPRM-213ENST00000580949 SALL2Q9Y467 1007 aaPredicted RBP8.7□□□□□ -1.02
PTPRM-213ENST00000580949 KIF7Q2M1P5 1343 aa8.7□□□□□ -1.02
PTPRM-213ENST00000580949 ADGRB3O60242 1522 aa8.7□□□□□ -1.02
PTPRM-213ENST00000580949 SPTLC1O15269 473 aa8.69□□□□□ -1.02
PTPRM-213ENST00000580949 FDX1P10109 184 aa8.69□□□□□ -1.02
PTPRM-213ENST00000580949 SH3D19Q5HYK7 790 aa8.69□□□□□ -1.02
PTPRM-213ENST00000580949 CFAP70Q5T0N1 1121 aa8.69□□□□□ -1.02
PTPRM-213ENST00000580949 RSBN1LQ6PCB5 846 aaPredicted RBP8.69□□□□□ -1.02
PTPRM-213ENST00000580949 IL27Q8NEV9 243 aa8.69□□□□□ -1.02
PTPRM-213ENST00000580949 HLA-CQ95604 372 aa8.69□□□□□ -1.02
PTPRM-213ENST00000580949 PLA2G2EQ9NZK7 142 aa8.69□□□□□ -1.02
PTPRM-213ENST00000580949 RPGRIP1LQ68CZ1 1315 aa8.69□□□□□ -1.02
PTPRM-213ENST00000580949 ZMYM3Q14202 1370 aa8.69□□□□□ -1.02
PTPRM-213ENST00000580949 ERVK-7P63135 1459 aa8.69□□□□□ -1.02
PTPRM-213ENST00000580949 ZC3H13Q5T200 1668 aaKnown RBP8.69□□□□□ -1.02
PTPRM-213ENST00000580949 NDUFV2P19404 249 aa8.68□□□□□ -1.02
PTPRM-213ENST00000580949 Q3C1V9 767 aa8.68□□□□□ -1.02
PTPRM-213ENST00000580949 NUTM2DQ5VT03 806 aaPredicted RBP8.68□□□□□ -1.02
PTPRM-213ENST00000580949 NRXN1Q9ULB1 1477 aa8.68□□□□□ -1.02
PTPRM-213ENST00000580949 TRPM1Q7Z4N2 1603 aa8.68□□□□□ -1.02
PTPRM-213ENST00000580949 MADDQ8WXG6 1647 aa8.68□□□□□ -1.02
PTPRM-213ENST00000580949 PIK3C2BO00750 1634 aa8.67□□□□□ -1.02
PTPRM-213ENST00000580949 MYOM2P54296 1465 aa8.67□□□□□ -1.02
PTPRM-213ENST00000580949 GUCA2AQ02747 115 aa8.67□□□□□ -1.02
PTPRM-213ENST00000580949 TUSC1Q2TAM9 212 aa8.67□□□□□ -1.02
PTPRM-213ENST00000580949 CFAP65Q6ZU64 1925 aaKnown RBP8.67□□□□□ -1.02
PTPRM-213ENST00000580949 RIC3Q7Z5B4 369 aa8.67□□□□□ -1.02
PTPRM-213ENST00000580949 THAP11Q96EK4 314 aa8.67□□□□□ -1.02
PTPRM-213ENST00000580949 TESK2Q96S53 571 aa8.67□□□□□ -1.02
PTPRM-213ENST00000580949 C14orf93Q9H972 538 aaKnown RBP8.67□□□□□ -1.02
PTPRM-213ENST00000580949 GOPCQ9HD26 462 aa8.67□□□□□ -1.02
PTPRM-213ENST00000580949 MROH2AA6NES4 1674 aa8.66□□□□□ -1.02
PTPRM-213ENST00000580949 FMNL1O95466 1100 aaPredicted RBP8.66□□□□□ -1.02
PTPRM-213ENST00000580949 CLK2P49760 499 aaKnown RBP8.66□□□□□ -1.02
PTPRM-213ENST00000580949 SKIV2LQ15477 1246 aaKnown RBP8.66□□□□□ -1.02
PTPRM-213ENST00000580949 BRICD5Q6PL45 260 aa8.66□□□□□ -1.02
PTPRM-213ENST00000580949 PCDHGC3Q9UN70 934 aa8.66□□□□□ -1.02
PTPRM-213ENST00000580949 CLTCQ00610 1675 aaKnown RBP8.65□□□□□ -1.02
PTPRM-213ENST00000580949 ADH1BP00325 375 aa8.65□□□□□ -1.02
PTPRM-213ENST00000580949 CEBPAP49715 358 aaPredicted RBP8.65□□□□□ -1.02
PTPRM-213ENST00000580949 ESF1Q9H501 851 aaKnown RBP8.65□□□□□ -1.02
PTPRM-213ENST00000580949 PREX1Q8TCU6 1659 aa8.65□□□□□ -1.03
PTPRM-213ENST00000580949 TLL1O43897 1013 aa8.64□□□□□ -1.03
PTPRM-213ENST00000580949 RNF19BQ6ZMZ0 732 aa8.64□□□□□ -1.03
PTPRM-213ENST00000580949 SPSB2Q99619 263 aa8.64□□□□□ -1.03
PTPRM-213ENST00000580949 POLR3EQ9NVU0 708 aa8.64□□□□□ -1.03
PTPRM-213ENST00000580949 LIMD1Q9UGP4 676 aa8.64□□□□□ -1.03
PTPRM-213ENST00000580949 SPATA31D1Q6ZQQ2 1576 aa8.64□□□□□ -1.03
PTPRM-213ENST00000580949 KIF1BO60333 1816 aa8.64□□□□□ -1.03
PTPRM-213ENST00000580949 PIK3C2GO75747 1445 aa8.63□□□□□ -1.03
PTPRM-213ENST00000580949 TMEM131LA2VDJ0 1609 aa8.63□□□□□ -1.03
PTPRM-213ENST00000580949 LAMC1P11047 1609 aa8.63□□□□□ -1.03
PTPRM-213ENST00000580949 PRPF38BQ5VTL8 546 aaKnown RBP8.63□□□□□ -1.03
PTPRM-213ENST00000580949 TMEM132EQ6IEE7 984 aa8.63□□□□□ -1.03
PTPRM-213ENST00000580949 NKX2-3Q8TAU0 364 aa8.63□□□□□ -1.03
PTPRM-213ENST00000580949 NEXMIFQ5QGS0 1516 aa8.63□□□□□ -1.03
PTPRM-213ENST00000580949 ZFYVE9O95405 1425 aa8.63□□□□□ -1.03
PTPRM-213ENST00000580949 TNRQ92752 1358 aa8.62□□□□□ -1.03
PTPRM-213ENST00000580949 DISP3Q9P2K9 1392 aa8.62□□□□□ -1.03
PTPRM-213ENST00000580949 POLR3GLQ9BT43 218 aa8.62□□□□□ -1.03
PTPRM-213ENST00000580949 PCDHB15Q9Y5E8 787 aa8.62□□□□□ -1.03
PTPRM-213ENST00000580949 IFT172Q9UG01 1749 aa8.62□□□□□ -1.03
PTPRM-213ENST00000580949 A2ML1A8K2U0 1454 aa8.62□□□□□ -1.03
PTPRM-213ENST00000580949 SCAF11Q99590 1463 aaKnown RBP8.62□□□□□ -1.03
PTPRM-213ENST00000580949 SPDYE5A6NIY4 337 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms