RNA–Protein interactions for RNA: ENST00000580569.1

RFFL-207, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene RFFL, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-207ENST00000580569 CASZ1Q86V15 1759 aa10.53□□□□□ -0.72
RFFL-207ENST00000580569 TRIM37O94972 964 aa10.53□□□□□ -0.72
RFFL-207ENST00000580569 SLC12A5Q9H2X9 1139 aa10.53□□□□□ -0.72
RFFL-207ENST00000580569 NUDCQ9Y266 331 aa10.53□□□□□ -0.72
RFFL-207ENST00000580569 PARP4Q9UKK3 1724 aaKnown RBP10.53□□□□□ -0.72
RFFL-207ENST00000580569 APBA3O96018 575 aa10.52□□□□□ -0.73
RFFL-207ENST00000580569 SPON1Q9HCB6 807 aa10.52□□□□□ -0.73
RFFL-207ENST00000580569 MON2Q7Z3U7 1717 aa10.52□□□□□ -0.73
RFFL-207ENST00000580569 KCNQ2O43526 872 aa10.51□□□□□ -0.73
RFFL-207ENST00000580569 NBPF14Q5TI25 921 aa10.51□□□□□ -0.73
RFFL-207ENST00000580569 PMFBP1Q8TBY8 1022 aa10.51□□□□□ -0.73
RFFL-207ENST00000580569 ZC3H15Q8WU90 426 aaKnown RBP10.51□□□□□ -0.73
RFFL-207ENST00000580569 POLR3AO14802 1390 aaPredicted RBP10.51□□□□□ -0.73
RFFL-207ENST00000580569 MAP2P11137 1827 aaKnown RBP10.5□□□□□ -0.73
RFFL-207ENST00000580569 NEFLP07196 543 aa10.5□□□□□ -0.73
RFFL-207ENST00000580569 NEUROD2Q15784 382 aa10.5□□□□□ -0.73
RFFL-207ENST00000580569 ERICH6BQ5W0A0 696 aa10.5□□□□□ -0.73
RFFL-207ENST00000580569 BARGINQ6ZT62 677 aa10.5□□□□□ -0.73
RFFL-207ENST00000580569 PEAK1Q9H792 1746 aa10.5□□□□□ -0.73
RFFL-207ENST00000580569 PDE3BQ13370 1112 aa10.49□□□□□ -0.73
RFFL-207ENST00000580569 PRAM1Q96QH2 718 aa10.49□□□□□ -0.73
RFFL-207ENST00000580569 CABP2Q9NPB3 220 aa10.49□□□□□ -0.73
RFFL-207ENST00000580569 PRDM11Q9NQV5 511 aa10.49□□□□□ -0.73
RFFL-207ENST00000580569 ADAMTS8Q9UP79 889 aa10.49□□□□□ -0.73
RFFL-207ENST00000580569 TOPAZ1Q8N9V7 1692 aa10.49□□□□□ -0.73
RFFL-207ENST00000580569 LMO7Q8WWI1 1683 aa10.49□□□□□ -0.73
RFFL-207ENST00000580569 NSD2O96028 1365 aa10.49□□□□□ -0.73
RFFL-207ENST00000580569 PPP1R1BQ9UD71 204 aaPredicted RBP10.48□□□□□ -0.73
RFFL-207ENST00000580569 A0A1W2PP64 1363 aa10.48□□□□□ -0.73
RFFL-207ENST00000580569 KIAA0232Q92628 1395 aa10.48□□□□□ -0.73
RFFL-207ENST00000580569 ZNF521Q96K83 1311 aa10.47□□□□□ -0.73
RFFL-207ENST00000580569 SSH2Q76I76 1423 aa10.47□□□□□ -0.73
RFFL-207ENST00000580569 ATP7BP35670 1465 aa10.47□□□□□ -0.73
RFFL-207ENST00000580569 NRKQ7Z2Y5 1582 aa10.47□□□□□ -0.73
RFFL-207ENST00000580569 SLC24A3Q9HC58 644 aa10.46□□□□□ -0.73
RFFL-207ENST00000580569 MINK1Q8N4C8 1332 aaPredicted RBP10.46□□□□□ -0.73
RFFL-207ENST00000580569 PRR36Q9H6K5 1346 aa10.46□□□□□ -0.73
RFFL-207ENST00000580569 WNK3Q9BYP7 1800 aa10.45□□□□□ -0.74
RFFL-207ENST00000580569 COL3A1P02461 1466 aaPredicted RBP10.45□□□□□ -0.74
RFFL-207ENST00000580569 CGNL1Q0VF96 1302 aa10.45□□□□□ -0.74
RFFL-207ENST00000580569 SENP3-EIF4A1A0A087X0R7 540 aa10.45□□□□□ -0.74
RFFL-207ENST00000580569 PLSCR1O15162 318 aa10.45□□□□□ -0.74
RFFL-207ENST00000580569 SAFB2Q14151 953 aaKnown RBP eCLIP10.45□□□□□ -0.74
RFFL-207ENST00000580569 ZNF784Q8NCA9 323 aaPredicted RBP10.45□□□□□ -0.74
RFFL-207ENST00000580569 ARHGEF1Q92888 912 aaKnown RBP10.45□□□□□ -0.74
RFFL-207ENST00000580569 AKT1S1Q96B36 256 aa10.45□□□□□ -0.74
RFFL-207ENST00000580569 CDK19Q9BWU1 502 aa10.45□□□□□ -0.74
RFFL-207ENST00000580569 POGKQ9P215 609 aa10.45□□□□□ -0.74
RFFL-207ENST00000580569 THRAP3Q9Y2W1 955 aaKnown RBP10.45□□□□□ -0.74
RFFL-207ENST00000580569 CPSF1Q10570 1443 aaKnown RBP10.44□□□□□ -0.74
RFFL-207ENST00000580569 CEP350Q5VT06 3117 aa10.44□□□□□ -0.74
RFFL-207ENST00000580569 CPDO75976 1380 aa10.43□□□□□ -0.74
RFFL-207ENST00000580569 WASLO00401 505 aaPredicted RBP10.43□□□□□ -0.74
RFFL-207ENST00000580569 CHRNA2Q15822 529 aa10.43□□□□□ -0.74
RFFL-207ENST00000580569 IFFO2Q5TF58 517 aa10.43□□□□□ -0.74
RFFL-207ENST00000580569 ZNF467Q7Z7K2 595 aaPredicted RBP10.43□□□□□ -0.74
RFFL-207ENST00000580569 NGDNQ8NEJ9 315 aaKnown RBP10.43□□□□□ -0.74
RFFL-207ENST00000580569 CDCA7LQ96GN5 454 aa10.43□□□□□ -0.74
RFFL-207ENST00000580569 MFRPQ9BY79 579 aa10.43□□□□□ -0.74
RFFL-207ENST00000580569 STRN4Q9NRL3 753 aa10.43□□□□□ -0.74
RFFL-207ENST00000580569 GOLGB1Q14789 3259 aaKnown RBP10.43□□□□□ -0.74
RFFL-207ENST00000580569 SEMA3EO15041 775 aa10.42□□□□□ -0.74
RFFL-207ENST00000580569 PAK3O75914 559 aaPredicted RBP10.42□□□□□ -0.74
RFFL-207ENST00000580569 SRPK2P78362 688 aaKnown RBP10.42□□□□□ -0.74
RFFL-207ENST00000580569 IRX6P78412 446 aaPredicted RBP10.42□□□□□ -0.74
RFFL-207ENST00000580569 PDAP1Q13442 181 aaKnown RBP10.42□□□□□ -0.74
RFFL-207ENST00000580569 WDR43Q15061 677 aaKnown RBP eCLIP10.42□□□□□ -0.74
RFFL-207ENST00000580569 MORC1Q86VD1 984 aa10.42□□□□□ -0.74
RFFL-207ENST00000580569 TRMT2AQ8IZ69 625 aaKnown RBP10.42□□□□□ -0.74
RFFL-207ENST00000580569 TCP11L2Q8N4U5 519 aa10.42□□□□□ -0.74
RFFL-207ENST00000580569 LRRC37A3O60309 1634 aa10.42□□□□□ -0.74
RFFL-207ENST00000580569 OVOS2A0A0G2JMS6 1433 aa10.41□□□□□ -0.74
RFFL-207ENST00000580569 OVOS2A0A0J9YW53 1432 aa10.41□□□□□ -0.74
RFFL-207ENST00000580569 OVOS2Q6IE36 1432 aa10.41□□□□□ -0.74
RFFL-207ENST00000580569 C1QTNF8P60827 252 aa10.41□□□□□ -0.74
RFFL-207ENST00000580569 PPP4R2Q9NY27 417 aa10.41□□□□□ -0.74
RFFL-207ENST00000580569 USP35Q9P2H5 1018 aa10.41□□□□□ -0.74
RFFL-207ENST00000580569 BCL9O00512 1426 aa10.41□□□□□ -0.74
RFFL-207ENST00000580569 TESPA1A2RU30 521 aaPredicted RBP10.4□□□□□ -0.74
RFFL-207ENST00000580569 FYB1O15117 783 aa10.4□□□□□ -0.74
RFFL-207ENST00000580569 PTGER2P43116 358 aa10.4□□□□□ -0.74
RFFL-207ENST00000580569 EVA1CP58658 441 aa10.4□□□□□ -0.74
RFFL-207ENST00000580569 ZC3H6P61129 1189 aaKnown RBP10.4□□□□□ -0.74
RFFL-207ENST00000580569 E2F4Q16254 413 aa10.4□□□□□ -0.74
RFFL-207ENST00000580569 LARP1Q6PKG0 1096 aaKnown RBP10.4□□□□□ -0.74
RFFL-207ENST00000580569 ANO8Q9HCE9 1232 aaPredicted RBP10.4□□□□□ -0.74
RFFL-207ENST00000580569 COL5A2P05997 1499 aaPredicted RBP10.4□□□□□ -0.74
RFFL-207ENST00000580569 MTHFSP49914 203 aa10.39□□□□□ -0.75
RFFL-207ENST00000580569 NGEFQ8N5V2 710 aa10.39□□□□□ -0.75
RFFL-207ENST00000580569 TERF2IPQ9NYB0 399 aa10.39□□□□□ -0.75
RFFL-207ENST00000580569 CABP1Q9NZU7 370 aa10.39□□□□□ -0.75
RFFL-207ENST00000580569 SALL2Q9Y467 1007 aaPredicted RBP10.39□□□□□ -0.75
RFFL-207ENST00000580569 CRB1P82279 1406 aa10.39□□□□□ -0.75
RFFL-207ENST00000580569 COL18A1P39060 1754 aa10.39□□□□□ -0.75
RFFL-207ENST00000580569 DLG5Q8TDM6 1919 aa10.39□□□□□ -0.75
RFFL-207ENST00000580569 COL24A1Q17RW2 1714 aa10.38□□□□□ -0.75
RFFL-207ENST00000580569 USP19O94966 1318 aa10.38□□□□□ -0.75
RFFL-207ENST00000580569 DUSP27Q5VZP5 1158 aa10.38□□□□□ -0.75
RFFL-207ENST00000580569 REM2Q8IYK8 340 aaPredicted RBP10.38□□□□□ -0.75
RFFL-207ENST00000580569 SYT17Q9BSW7 474 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms