RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 ADH1AP07327 375 aa7□□□□□ -1.29
KPNB1-208ENST00000580019 GATA4P43694 442 aa7□□□□□ -1.29
KPNB1-208ENST00000580019 AMPD1P23109 780 aa6.99□□□□□ -1.29
KPNB1-208ENST00000580019 PTGIRP43119 386 aa6.99□□□□□ -1.29
KPNB1-208ENST00000580019 RSPO4Q2I0M5 234 aaPredicted RBP6.99□□□□□ -1.29
KPNB1-208ENST00000580019 C1orf229Q6ZS94 237 aaPredicted RBP6.99□□□□□ -1.29
KPNB1-208ENST00000580019 CCDC102AQ96A19 550 aa6.99□□□□□ -1.29
KPNB1-208ENST00000580019 DYRK1BQ9Y463 629 aa6.99□□□□□ -1.29
KPNB1-208ENST00000580019 PER1O15534 1290 aaPredicted RBP6.98□□□□□ -1.29
KPNB1-208ENST00000580019 HOXB4P17483 251 aaPredicted RBP6.98□□□□□ -1.29
KPNB1-208ENST00000580019 SSTR3P32745 418 aaPredicted RBP6.98□□□□□ -1.29
KPNB1-208ENST00000580019 RNF144AP50876 292 aaPredicted RBP6.98□□□□□ -1.29
KPNB1-208ENST00000580019 GPKOWQ92917 476 aaPredicted RBP eCLIP6.98□□□□□ -1.29
KPNB1-208ENST00000580019 SLC10A4Q96EP9 437 aa6.98□□□□□ -1.29
KPNB1-208ENST00000580019 INTS6LQ5JSJ4 861 aaKnown RBP6.97□□□□□ -1.29
KPNB1-208ENST00000580019 KLRG1Q96E93 195 aa6.97□□□□□ -1.29
KPNB1-208ENST00000580019 ZBTB3Q9H5J0 574 aa6.97□□□□□ -1.29
KPNB1-208ENST00000580019 KDM2AQ9Y2K7 1162 aa6.97□□□□□ -1.29
KPNB1-208ENST00000580019 HRCP23327 699 aa6.96□□□□□ -1.3
KPNB1-208ENST00000580019 GOLGA6L1Q8N7Z2 621 aa6.96□□□□□ -1.3
KPNB1-208ENST00000580019 GAS2L1Q99501 681 aaPredicted RBP6.96□□□□□ -1.3
KPNB1-208ENST00000580019 NKAPLQ5M9Q1 402 aa6.95□□□□□ -1.3
KPNB1-208ENST00000580019 RSBN1LQ6PCB5 846 aaPredicted RBP6.95□□□□□ -1.3
KPNB1-208ENST00000580019 CFHR5Q9BXR6 569 aa6.95□□□□□ -1.3
KPNB1-208ENST00000580019 NUCKS1Q9H1E3 243 aaKnown RBP6.94□□□□□ -1.3
KPNB1-208ENST00000580019 PCDHB15Q9Y5E8 787 aa6.94□□□□□ -1.3
KPNB1-208ENST00000580019 YBX3P16989 372 aaKnown RBP eCLIP6.93□□□□□ -1.32e-7■■■□□ 18.2
KPNB1-208ENST00000580019 LRP8Q14114 963 aa6.93□□□□□ -1.3
KPNB1-208ENST00000580019 KDF1Q8NAX2 398 aaPredicted RBP6.93□□□□□ -1.3
KPNB1-208ENST00000580019 ZNF784Q8NCA9 323 aaPredicted RBP6.93□□□□□ -1.3
KPNB1-208ENST00000580019 DYRK3O43781 588 aa6.92□□□□□ -1.3
KPNB1-208ENST00000580019 ARHGAP9Q9BRR9 750 aa6.92□□□□□ -1.3
KPNB1-208ENST00000580019 TMPRSS4Q9NRS4 437 aa6.92□□□□□ -1.3
KPNB1-208ENST00000580019 PHF24Q9UPV7 400 aa6.92□□□□□ -1.3
KPNB1-208ENST00000580019 DIXDC1Q155Q3 683 aa6.91□□□□□ -1.3
KPNB1-208ENST00000580019 SLCO4C1Q6ZQN7 724 aa6.91□□□□□ -1.3
KPNB1-208ENST00000580019 TSC1Q92574 1164 aa6.91□□□□□ -1.3
KPNB1-208ENST00000580019 LILRA1O75019 489 aa6.9□□□□□ -1.3
KPNB1-208ENST00000580019 GPC1P35052 558 aa6.9□□□□□ -1.3
KPNB1-208ENST00000580019 ADD1P35611 737 aaKnown RBP6.9□□□□□ -1.3
KPNB1-208ENST00000580019 TXKP42681 527 aa6.9□□□□□ -1.3
KPNB1-208ENST00000580019 DGKGP49619 791 aa6.9□□□□□ -1.3
KPNB1-208ENST00000580019 GIGYF2Q6Y7W6 1299 aaKnown RBP6.9□□□□□ -1.3
KPNB1-208ENST00000580019 BTBD6Q96KE9 485 aa6.9□□□□□ -1.3
KPNB1-208ENST00000580019 KRTAP4-9Q9BYQ8 210 aa6.9□□□□□ -1.3
KPNB1-208ENST00000580019 PRSS36Q5K4E3 855 aa6.89□□□□□ -1.31
KPNB1-208ENST00000580019 MCTP1Q6DN14 999 aa6.89□□□□□ -1.31
KPNB1-208ENST00000580019 PDXDC2PQ6P474 469 aa6.89□□□□□ -1.31
KPNB1-208ENST00000580019 CABLES1Q8TDN4 633 aa6.89□□□□□ -1.31
KPNB1-208ENST00000580019 TBC1D2Q9BYX2 928 aa6.89□□□□□ -1.31
KPNB1-208ENST00000580019 PAX4O43316 350 aa6.88□□□□□ -1.31
KPNB1-208ENST00000580019 POU4F2Q12837 409 aa6.88□□□□□ -1.31
KPNB1-208ENST00000580019 ZBTB33Q86T24 672 aa6.88□□□□□ -1.31
KPNB1-208ENST00000580019 TPSG1Q9NRR2 321 aa6.88□□□□□ -1.31
KPNB1-208ENST00000580019 F11P03951 625 aa6.87□□□□□ -1.31
KPNB1-208ENST00000580019 GGA1Q9UJY5 639 aa6.87□□□□□ -1.31
KPNB1-208ENST00000580019 ARID1BQ8NFD5 2236 aaPredicted RBP6.86□□□□□ -1.31
KPNB1-208ENST00000580019 HYAL3O43820 417 aaPredicted RBP6.86□□□□□ -1.31
KPNB1-208ENST00000580019 SPATA31C1P0DKV0 1188 aa6.86□□□□□ -1.31
KPNB1-208ENST00000580019 EPXP11678 715 aa6.86□□□□□ -1.31
KPNB1-208ENST00000580019 NBPF20Q3BBV1 942 aa6.86□□□□□ -1.31
KPNB1-208ENST00000580019 BMP4P12644 408 aa6.85□□□□□ -1.31
KPNB1-208ENST00000580019 WDR44Q5JSH3 913 aa6.85□□□□□ -1.31
KPNB1-208ENST00000580019 NBPF10Q6P3W6 841 aaKnown RBP6.85□□□□□ -1.31
KPNB1-208ENST00000580019 NBPF15Q8N660 670 aa6.85□□□□□ -1.31
KPNB1-208ENST00000580019 TRIM52Q96A61 297 aa6.85□□□□□ -1.31
KPNB1-208ENST00000580019 BEGAINQ9BUH8 593 aa6.85□□□□□ -1.31
KPNB1-208ENST00000580019 ERVH48-1M5A8F1 160 aa6.84□□□□□ -1.31
KPNB1-208ENST00000580019 MEN1O00255 615 aa6.84□□□□□ -1.31
KPNB1-208ENST00000580019 RAB15P59190 212 aa6.84□□□□□ -1.31
KPNB1-208ENST00000580019 SLC27A3Q5K4L6 730 aa6.84□□□□□ -1.31
KPNB1-208ENST00000580019 TIMMDC1Q9NPL8 285 aa6.84□□□□□ -1.31
KPNB1-208ENST00000580019 RIC3Q7Z5B4 369 aa6.83□□□□□ -1.32
KPNB1-208ENST00000580019 HELBQ8NG08 1087 aaPredicted RBP6.83□□□□□ -1.32
KPNB1-208ENST00000580019 KRTAP4-2Q9BYR5 136 aa6.83□□□□□ -1.32
KPNB1-208ENST00000580019 TTLL12Q14166 644 aaPredicted RBP6.82□□□□□ -1.32
KPNB1-208ENST00000580019 CSPP1Q1MSJ5 1256 aa6.82□□□□□ -1.32
KPNB1-208ENST00000580019 AMER1Q5JTC6 1135 aaPredicted RBP6.82□□□□□ -1.32
KPNB1-208ENST00000580019 NUTM2BA6NNL0 878 aaPredicted RBP6.81□□□□□ -1.32
KPNB1-208ENST00000580019 NUTM2EB1AL46 878 aaPredicted RBP6.81□□□□□ -1.32
KPNB1-208ENST00000580019 SPATA31C2B4DYI2 1134 aa6.81□□□□□ -1.32
KPNB1-208ENST00000580019 ATP5J2-PTCD1G3V325 749 aa6.81□□□□□ -1.32
KPNB1-208ENST00000580019 THBS1P07996 1170 aa6.81□□□□□ -1.32
KPNB1-208ENST00000580019 NUTM2DQ5VT03 806 aaPredicted RBP6.81□□□□□ -1.32
KPNB1-208ENST00000580019 RNF135Q8IUD6 432 aa6.81□□□□□ -1.32
KPNB1-208ENST00000580019 NUTM2AQ8IVF1 878 aaPredicted RBP6.81□□□□□ -1.32
KPNB1-208ENST00000580019 C2CD2LO14523 706 aa6.8□□□□□ -1.32
KPNB1-208ENST00000580019 FZD5Q13467 585 aa6.8□□□□□ -1.32
KPNB1-208ENST00000580019 CHSY3Q70JA7 882 aa6.8□□□□□ -1.32
KPNB1-208ENST00000580019 FMNL2Q96PY5 1086 aa6.8□□□□□ -1.32
KPNB1-208ENST00000580019 PLVAPQ9BX97 442 aa6.8□□□□□ -1.32
KPNB1-208ENST00000580019 ATXN7L1Q9ULK2 861 aaPredicted RBP6.8□□□□□ -1.32
KPNB1-208ENST00000580019 APBA3O96018 575 aa6.79□□□□□ -1.32
KPNB1-208ENST00000580019 ARAFP10398 606 aa6.79□□□□□ -1.32
KPNB1-208ENST00000580019 LBRQ14739 615 aaKnown RBP6.79□□□□□ -1.32
KPNB1-208ENST00000580019 TAS1R3Q7RTX0 852 aa6.79□□□□□ -1.32
KPNB1-208ENST00000580019 TRIM11Q96F44 468 aa6.79□□□□□ -1.32
KPNB1-208ENST00000580019 NLRP3Q96P20 1036 aa6.79□□□□□ -1.32
KPNB1-208ENST00000580019 GRIP2Q9C0E4 1043 aa6.79□□□□□ -1.32
KPNB1-208ENST00000580019 CYLDQ9NQC7 956 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms