RNA–Protein interactions for RNA: ENST00000574788.5

USP6-205, Transcript of ubiquitin specific peptidase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP6, Length 8,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-205ENST00000574788 RBM5P52756 815 aaKnown RBP eCLIP11.7□□□□□ -0.54
USP6-205ENST00000574788 COMMD10Q9Y6G5 202 aa11.7□□□□□ -0.54
USP6-205ENST00000574788 ZSCAN31Q96LW9 406 aaPredicted RBP11.7□□□□□ -0.54
USP6-205ENST00000574788 EHMT1Q9H9B1 1298 aa11.7□□□□□ -0.54
USP6-205ENST00000574788 FYCO1Q9BQS8 1478 aa11.7□□□□□ -0.54
USP6-205ENST00000574788 NFKBIBQ15653 356 aa11.7□□□□□ -0.54
USP6-205ENST00000574788 LARP1BQ659C4 914 aaKnown RBP11.7□□□□□ -0.54
USP6-205ENST00000574788 PLVAPQ9BX97 442 aa11.7□□□□□ -0.54
USP6-205ENST00000574788 TTC21AQ8NDW8 1320 aa11.69□□□□□ -0.54
USP6-205ENST00000574788 PIBF1Q8WXW3 757 aa11.69□□□□□ -0.54
USP6-205ENST00000574788 FSD2A1L4K1 749 aa11.69□□□□□ -0.54
USP6-205ENST00000574788 FAM193AP78312 1265 aa11.69□□□□□ -0.54
USP6-205ENST00000574788 PPP6R1Q9UPN7 881 aa11.69□□□□□ -0.54
USP6-205ENST00000574788 PRPF40AO75400 957 aaKnown RBP11.69□□□□□ -0.54
USP6-205ENST00000574788 SSBP05455 408 aaKnown RBP eCLIP11.69□□□□□ -0.54
USP6-205ENST00000574788 CNTLNQ9NXG0 1405 aa11.69□□□□□ -0.54
USP6-205ENST00000574788 POTEB2H3BUK9 544 aa11.68□□□□□ -0.54
USP6-205ENST00000574788 USO1O60763 962 aaKnown RBP11.68□□□□□ -0.54
USP6-205ENST00000574788 TDO2P48775 406 aa11.68□□□□□ -0.54
USP6-205ENST00000574788 SPATA32Q96LK8 384 aa11.68□□□□□ -0.54
USP6-205ENST00000574788 ZWINTO95229 277 aa11.68□□□□□ -0.54
USP6-205ENST00000574788 CTNNA2P26232 953 aa11.68□□□□□ -0.54
USP6-205ENST00000574788 LARP1Q6PKG0 1096 aaKnown RBP11.68□□□□□ -0.54
USP6-205ENST00000574788 SFPQP23246 707 aaKnown RBP eCLIP11.68□□□□□ -0.54
USP6-205ENST00000574788 KIF18AQ8NI77 898 aa11.68□□□□□ -0.54
USP6-205ENST00000574788 PAFAH1B1P43034 410 aa11.68□□□□□ -0.54
USP6-205ENST00000574788 BLOC1S2Q6QNY1 142 aa11.68□□□□□ -0.54
USP6-205ENST00000574788 SPDYE4A6NLX3 237 aa11.68□□□□□ -0.54
USP6-205ENST00000574788 CEBPZQ03701 1054 aaKnown RBP11.68□□□□□ -0.54
USP6-205ENST00000574788 PYM1Q9BRP8 204 aaKnown RBP11.68□□□□□ -0.54
USP6-205ENST00000574788 U3KPZ7 1027 aaPredicted RBP11.68□□□□□ -0.54
USP6-205ENST00000574788 RRP9O43818 475 aaKnown RBP11.67□□□□□ -0.54
USP6-205ENST00000574788 IKBKGQ9Y6K9 419 aa11.67□□□□□ -0.54
USP6-205ENST00000574788 CACNA2D4Q7Z3S7 1137 aa11.67□□□□□ -0.54
USP6-205ENST00000574788 CIZ1Q9ULV3 898 aaPredicted RBP11.67□□□□□ -0.54
USP6-205ENST00000574788 MPHOSPH6Q99547 160 aaKnown RBP11.67□□□□□ -0.54
USP6-205ENST00000574788 BRD4O60885 1362 aaPredicted RBP11.67□□□□□ -0.54
USP6-205ENST00000574788 STXBP4Q6ZWJ1 553 aa11.67□□□□□ -0.54
USP6-205ENST00000574788 ZSCAN29Q8IWY8 852 aaPredicted RBP11.67□□□□□ -0.54
USP6-205ENST00000574788 NUP62CLQ9H1M0 184 aa11.67□□□□□ -0.54
USP6-205ENST00000574788 TATP17735 454 aaPredicted RBP11.66□□□□□ -0.54
USP6-205ENST00000574788 ACTN2P35609 894 aa11.66□□□□□ -0.54
USP6-205ENST00000574788 TMEM266Q2M3C6 531 aa11.66□□□□□ -0.54
USP6-205ENST00000574788 FAM177A1Q8N128 213 aaPredicted RBP11.66□□□□□ -0.54
USP6-205ENST00000574788 ABTB2Q8N961 1025 aa11.66□□□□□ -0.54
USP6-205ENST00000574788 CFAP100Q494V2 611 aa11.66□□□□□ -0.54
USP6-205ENST00000574788 NUP133Q8WUM0 1156 aa11.66□□□□□ -0.54
USP6-205ENST00000574788 CCDC113Q9H0I3 377 aa11.66□□□□□ -0.54
USP6-205ENST00000574788 ZNF652Q9Y2D9 606 aa11.66□□□□□ -0.54
USP6-205ENST00000574788 CCDC172P0C7W6 258 aa11.66□□□□□ -0.54
USP6-205ENST00000574788 SCLT1Q96NL6 688 aa11.66□□□□□ -0.54
USP6-205ENST00000574788 MYOM3Q5VTT5 1437 aa11.66□□□□□ -0.54
USP6-205ENST00000574788 SLF2Q8IX21 1173 aa11.66□□□□□ -0.54
USP6-205ENST00000574788 GOLGA6L9A6NEM1 432 aa11.66□□□□□ -0.54
USP6-205ENST00000574788 PDE3AQ14432 1141 aa11.66□□□□□ -0.54
USP6-205ENST00000574788 ALS2CR12Q96Q35 445 aa11.66□□□□□ -0.54
USP6-205ENST00000574788 SLU7O95391 586 aaKnown RBP11.65□□□□□ -0.54
USP6-205ENST00000574788 NLRP6P59044 892 aa11.65□□□□□ -0.54
USP6-205ENST00000574788 ZNF428Q96B54 188 aa11.65□□□□□ -0.54
USP6-205ENST00000574788 RAB3IL1Q8TBN0 382 aa11.65□□□□□ -0.54
USP6-205ENST00000574788 CALCOCO1Q9P1Z2 691 aa11.65□□□□□ -0.54
USP6-205ENST00000574788 MAP3K11Q16584 847 aa11.65□□□□□ -0.54
USP6-205ENST00000574788 FERMT2Q96AC1 680 aa11.65□□□□□ -0.54
USP6-205ENST00000574788 PPP1R1BQ9UD71 204 aaPredicted RBP11.65□□□□□ -0.54
USP6-205ENST00000574788 CTAGE5O15320 804 aa11.65□□□□□ -0.54
USP6-205ENST00000574788 IFI16Q16666 785 aaKnown RBP11.65□□□□□ -0.54
USP6-205ENST00000574788 SPECC1Q5M775 1068 aa11.65□□□□□ -0.54
USP6-205ENST00000574788 BMS1Q14692 1282 aaKnown RBP11.65□□□□□ -0.55
USP6-205ENST00000574788 HMOX1P09601 288 aa11.64□□□□□ -0.55
USP6-205ENST00000574788 CUL5Q93034 780 aa11.64□□□□□ -0.55
USP6-205ENST00000574788 EHBP1Q8NDI1 1231 aa11.64□□□□□ -0.55
USP6-205ENST00000574788 SPG7Q9UQ90 795 aa11.64□□□□□ -0.55
USP6-205ENST00000574788 PLEKHH1Q9ULM0 1364 aa11.64□□□□□ -0.55
USP6-205ENST00000574788 CASQ1P31415 396 aa11.64□□□□□ -0.55
USP6-205ENST00000574788 IL27Q8NEV9 243 aa11.64□□□□□ -0.55
USP6-205ENST00000574788 BCL11BQ9C0K0 894 aaPredicted RBP11.64□□□□□ -0.55
USP6-205ENST00000574788 NEMFO60524 1076 aa11.64□□□□□ -0.55
USP6-205ENST00000574788 IGHMBP2P38935 993 aaKnown RBP11.64□□□□□ -0.55
USP6-205ENST00000574788 FILIP1Q7Z7B0 1213 aa11.63□□□□□ -0.55
USP6-205ENST00000574788 LRP2BPQ9P2M1 347 aa11.63□□□□□ -0.55
USP6-205ENST00000574788 CAVIN2O95810 425 aa11.63□□□□□ -0.55
USP6-205ENST00000574788 PTPN14Q15678 1187 aa11.63□□□□□ -0.55
USP6-205ENST00000574788 DAAM2Q86T65 1068 aa11.63□□□□□ -0.55
USP6-205ENST00000574788 USP37Q86T82 979 aa11.63□□□□□ -0.55
USP6-205ENST00000574788 K7ELQ4 463 aaPredicted RBP11.63□□□□□ -0.55
USP6-205ENST00000574788 HDGFL1Q5TGJ6 251 aa11.63□□□□□ -0.55
USP6-205ENST00000574788 AKAP2Q9Y2D5 859 aa11.63□□□□□ -0.55
USP6-205ENST00000574788 CEP126Q9P2H0 1117 aa11.63□□□□□ -0.55
USP6-205ENST00000574788 KIF4AO95239 1232 aa11.63□□□□□ -0.55
USP6-205ENST00000574788 AMPD3Q01432 767 aa11.63□□□□□ -0.55
USP6-205ENST00000574788 UBE4AQ14139 1066 aa11.63□□□□□ -0.55
USP6-205ENST00000574788 CCDC12Q8WUD4 166 aaPredicted RBP11.63□□□□□ -0.55
USP6-205ENST00000574788 CABP4P57796 275 aa11.62□□□□□ -0.55
USP6-205ENST00000574788 TTC12Q9H892 705 aaPredicted RBP11.62□□□□□ -0.55
USP6-205ENST00000574788 DDX46Q7L014 1031 aaKnown RBP11.62□□□□□ -0.55
USP6-205ENST00000574788 SCAND2PQ9GZW5 306 aaPredicted RBP11.62□□□□□ -0.55
USP6-205ENST00000574788 GOPCQ9HD26 462 aa11.62□□□□□ -0.55
USP6-205ENST00000574788 FKBP4Q02790 459 aaKnown RBP eCLIP11.62□□□□□ -0.55
USP6-205ENST00000574788 FAM114A1Q8IWE2 563 aa11.62□□□□□ -0.55
USP6-205ENST00000574788 A0A087WZG4 1122 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms