RNA–Protein interactions for RNA: ENST00000574217.1

PRPF8-210, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 310 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-210ENST00000574217 FAM182BQ5T319 152 aa8.93□□□□□ -0.98
PRPF8-210ENST00000574217 PNISRQ8TF01 805 aaKnown RBP8.93□□□□□ -0.98
PRPF8-210ENST00000574217 CDCA7Q9BWT1 371 aaPredicted RBP8.93□□□□□ -0.98
PRPF8-210ENST00000574217 NCAPD2Q15021 1401 aa8.93□□□□□ -0.98
PRPF8-210ENST00000574217 SHANK3Q9BYB0 1731 aa8.93□□□□□ -0.98
PRPF8-210ENST00000574217 MEGF6O75095 1541 aa8.92□□□□□ -0.98
PRPF8-210ENST00000574217 IGSF1Q8N6C5 1336 aa8.92□□□□□ -0.98
PRPF8-210ENST00000574217 U2AF1L5P0DN76 240 aaPredicted RBP8.92□□□□□ -0.98
PRPF8-210ENST00000574217 U2AF1Q01081 240 aaKnown RBP eCLIP8.92□□□□□ -0.98
PRPF8-210ENST00000574217 DDB1Q16531 1140 aa8.92□□□□□ -0.98
PRPF8-210ENST00000574217 FAM9BQ8IZU0 186 aa8.92□□□□□ -0.98
PRPF8-210ENST00000574217 CNKSR2Q8WXI2 1034 aa8.92□□□□□ -0.98
PRPF8-210ENST00000574217 TNS2Q63HR2 1409 aa8.91□□□□□ -0.98
PRPF8-210ENST00000574217 EXOC5O00471 708 aa8.91□□□□□ -0.98
PRPF8-210ENST00000574217 PDE3BQ13370 1112 aa8.91□□□□□ -0.98
PRPF8-210ENST00000574217 OVOS2A0A0G2JMS6 1433 aa8.9□□□□□ -0.98
PRPF8-210ENST00000574217 SBF2Q86WG5 1849 aa8.9□□□□□ -0.98
PRPF8-210ENST00000574217 TATP17735 454 aaPredicted RBP8.9□□□□□ -0.98
PRPF8-210ENST00000574217 MARCH10Q8NA82 808 aaPredicted RBP8.9□□□□□ -0.98
PRPF8-210ENST00000574217 RAPGEF4Q8WZA2 1011 aa8.9□□□□□ -0.98
PRPF8-210ENST00000574217 ADAMTS8Q9UP79 889 aa8.9□□□□□ -0.98
PRPF8-210ENST00000574217 PKD1L3Q7Z443 1732 aa8.9□□□□□ -0.98
PRPF8-210ENST00000574217 FCHSD2O94868 740 aa8.89□□□□□ -0.99
PRPF8-210ENST00000574217 HMOX1P09601 288 aa8.89□□□□□ -0.99
PRPF8-210ENST00000574217 SULT6B1Q6IMI4 303 aa8.89□□□□□ -0.99
PRPF8-210ENST00000574217 AEBP1Q8IUX7 1158 aa8.89□□□□□ -0.99
PRPF8-210ENST00000574217 UPF1Q92900 1129 aaKnown RBP eCLIP8.89□□□□□ -0.99
PRPF8-210ENST00000574217 PNNQ9H307 717 aaKnown RBP8.89□□□□□ -0.99
PRPF8-210ENST00000574217 KDRP35968 1356 aa8.88□□□□□ -0.99
PRPF8-210ENST00000574217 NPM3O75607 178 aaKnown RBP8.88□□□□□ -0.99
PRPF8-210ENST00000574217 NEFMP07197 916 aa8.88□□□□□ -0.99
PRPF8-210ENST00000574217 ZCRB1Q8TBF4 217 aaKnown RBP8.88□□□□□ -0.99
PRPF8-210ENST00000574217 RSPH6AQ9H0K4 717 aa8.88□□□□□ -0.99
PRPF8-210ENST00000574217 TNS1Q9HBL0 1735 aaKnown RBP8.88□□□□□ -0.99
PRPF8-210ENST00000574217 MAPK8IP3Q9UPT6 1336 aa8.87□□□□□ -0.99
PRPF8-210ENST00000574217 PRKAR2BP31323 418 aa8.87□□□□□ -0.99
PRPF8-210ENST00000574217 FAM196AQ6ZSG2 479 aa8.87□□□□□ -0.99
PRPF8-210ENST00000574217 DDX54Q8TDD1 881 aaKnown RBP8.87□□□□□ -0.99
PRPF8-210ENST00000574217 EP400Q96L91 3159 aa8.87□□□□□ -0.99
PRPF8-210ENST00000574217 KAT6BQ8WYB5 2073 aa8.87□□□□□ -0.99
PRPF8-210ENST00000574217 DOT1LQ8TEK3 1739 aa8.86□□□□□ -0.99
PRPF8-210ENST00000574217 TRIM37O94972 964 aa8.86□□□□□ -0.99
PRPF8-210ENST00000574217 CCDC146Q8IYE0 955 aa8.86□□□□□ -0.99
PRPF8-210ENST00000574217 RUNDC1Q96C34 613 aa8.86□□□□□ -0.99
PRPF8-210ENST00000574217 PCDH11XQ9BZA7 1347 aa8.85□□□□□ -0.99
PRPF8-210ENST00000574217 PCDH11YQ9BZA8 1340 aa8.85□□□□□ -0.99
PRPF8-210ENST00000574217 NHSQ6T4R5 1651 aa8.85□□□□□ -0.99
PRPF8-210ENST00000574217 CYP27B1O15528 508 aa8.85□□□□□ -0.99
PRPF8-210ENST00000574217 ACSBG1Q96GR2 724 aa8.85□□□□□ -0.99
PRPF8-210ENST00000574217 PLEKHF1Q96S99 279 aa8.85□□□□□ -0.99
PRPF8-210ENST00000574217 SPG7Q9UQ90 795 aa8.85□□□□□ -0.99
PRPF8-210ENST00000574217 BCL9O00512 1426 aa8.85□□□□□ -0.99
PRPF8-210ENST00000574217 TOGARAM1Q9Y4F4 1720 aa8.85□□□□□ -0.99
PRPF8-210ENST00000574217 PLEKHG2Q9H7P9 1386 aa8.85□□□□□ -0.99
PRPF8-210ENST00000574217 VIRMAQ69YN4 1812 aaKnown RBP8.84□□□□□ -0.99
PRPF8-210ENST00000574217 PLEKHO1Q53GL0 409 aaPredicted RBP8.84□□□□□ -0.99
PRPF8-210ENST00000574217 PTF1AQ7RTS3 328 aa8.84□□□□□ -0.99
PRPF8-210ENST00000574217 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.84□□□□□ -0.99
PRPF8-210ENST00000574217 ITGB4P16144 1822 aa8.84□□□□□ -0.99
PRPF8-210ENST00000574217 BTAF1O14981 1849 aa8.83□□□□□ -1
PRPF8-210ENST00000574217 APAF1O14727 1248 aa8.83□□□□□ -1
PRPF8-210ENST00000574217 KCNQ2O43526 872 aa8.83□□□□□ -1
PRPF8-210ENST00000574217 PHKG2P15735 406 aa8.83□□□□□ -1
PRPF8-210ENST00000574217 HNRNPUQ00839 825 aaKnown RBP eCLIP8.83□□□□□ -1
PRPF8-210ENST00000574217 AMOTQ4VCS5 1084 aa8.83□□□□□ -1
PRPF8-210ENST00000574217 ZNF530Q6P9A1 599 aaPredicted RBP8.83□□□□□ -1
PRPF8-210ENST00000574217 CCDC125Q86Z20 511 aa8.83□□□□□ -1
PRPF8-210ENST00000574217 IFNL2Q8IZJ0 200 aa8.83□□□□□ -1
PRPF8-210ENST00000574217 PHACTR3Q96KR7 559 aa8.83□□□□□ -1
PRPF8-210ENST00000574217 SF3B2Q13435 895 aaKnown RBP8.82□□□□□ -1
PRPF8-210ENST00000574217 NKX1-1Q15270 411 aaPredicted RBP8.82□□□□□ -1
PRPF8-210ENST00000574217 MTHFSDQ2M296 383 aaKnown RBP8.82□□□□□ -1
PRPF8-210ENST00000574217 DEFB132Q7Z7B7 95 aa8.82□□□□□ -1
PRPF8-210ENST00000574217 GAS2L2Q8NHY3 880 aa8.82□□□□□ -1
PRPF8-210ENST00000574217 YTHDC1Q96MU7 727 aaKnown RBP8.82□□□□□ -1
PRPF8-210ENST00000574217 SCN11AQ9UI33 1791 aa8.81□□□□□ -1
PRPF8-210ENST00000574217 APBA3O96018 575 aa8.81□□□□□ -1
PRPF8-210ENST00000574217 TMPOP42166 694 aaKnown RBP8.81□□□□□ -1
PRPF8-210ENST00000574217 PRIM1P49642 420 aaKnown RBP8.81□□□□□ -1
PRPF8-210ENST00000574217 NEUROD2Q15784 382 aa8.81□□□□□ -1
PRPF8-210ENST00000574217 NFE2L2Q16236 605 aa8.81□□□□□ -1
PRPF8-210ENST00000574217 NGEFQ8N5V2 710 aa8.81□□□□□ -1
PRPF8-210ENST00000574217 BCL11BQ9C0K0 894 aaPredicted RBP8.81□□□□□ -1
PRPF8-210ENST00000574217 RRP7AQ9Y3A4 280 aaKnown RBP8.81□□□□□ -1
PRPF8-210ENST00000574217 DLG5Q8TDM6 1919 aa8.81□□□□□ -1
PRPF8-210ENST00000574217 SENP3-EIF4A1A0A087X0R7 540 aa8.8□□□□□ -1
PRPF8-210ENST00000574217 BAG6P46379 1132 aa8.8□□□□□ -1
PRPF8-210ENST00000574217 RIPK4P57078 832 aa8.8□□□□□ -1
PRPF8-210ENST00000574217 EN1Q05925 392 aaPredicted RBP8.8□□□□□ -1
PRPF8-210ENST00000574217 AKAP4Q5JQC9 854 aa8.8□□□□□ -1
PRPF8-210ENST00000574217 C1orf141Q5JVX7 400 aa8.8□□□□□ -1
PRPF8-210ENST00000574217 SYTL4Q96C24 671 aaPredicted RBP8.8□□□□□ -1
PRPF8-210ENST00000574217 SALL2Q9Y467 1007 aaPredicted RBP8.8□□□□□ -1
PRPF8-210ENST00000574217 KDM6AO15550 1401 aaPredicted RBP8.8□□□□□ -1
PRPF8-210ENST00000574217 RGPD3A6NKT7 1758 aaPredicted RBP8.79□□□□□ -1
PRPF8-210ENST00000574217 RGPD4Q7Z3J3 1758 aa8.79□□□□□ -1
PRPF8-210ENST00000574217 RREB1Q92766 1687 aa8.79□□□□□ -1
PRPF8-210ENST00000574217 MAP3K5Q99683 1374 aa8.79□□□□□ -1
PRPF8-210ENST00000574217 HSP90AB1P08238 724 aaKnown RBP8.79□□□□□ -1
PRPF8-210ENST00000574217 LMOD3Q0VAK6 560 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms