RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 EZH2Q15910 746 aaKnown RBP9.32□□□□□ -0.92
SMG6-204ENST00000570606 LARP1Q6PKG0 1096 aaKnown RBP9.32□□□□□ -0.92
SMG6-204ENST00000570606 BARGINQ6ZT62 677 aa9.32□□□□□ -0.92
SMG6-204ENST00000570606 TCP11L2Q8N4U5 519 aa9.32□□□□□ -0.92
SMG6-204ENST00000570606 PARD3Q8TEW0 1356 aa9.32□□□□□ -0.92
SMG6-204ENST00000570606 APBA3O96018 575 aa9.31□□□□□ -0.92
SMG6-204ENST00000570606 GCP02774 474 aa9.31□□□□□ -0.92
SMG6-204ENST00000570606 BMP2KQ9NSY1 1161 aaPredicted RBP9.31□□□□□ -0.92
SMG6-204ENST00000570606 ROCK2O75116 1388 aaKnown RBP9.31□□□□□ -0.92
SMG6-204ENST00000570606 CRB1P82279 1406 aa9.31□□□□□ -0.92
SMG6-204ENST00000570606 EVC2Q86UK5 1308 aa9.31□□□□□ -0.92
SMG6-204ENST00000570606 RGPD3A6NKT7 1758 aaPredicted RBP9.3□□□□□ -0.92
SMG6-204ENST00000570606 RGPD4Q7Z3J3 1758 aa9.3□□□□□ -0.92
SMG6-204ENST00000570606 RGPD5Q99666 1765 aa9.3□□□□□ -0.92
SMG6-204ENST00000570606 GALR2O43603 387 aaPredicted RBP9.3□□□□□ -0.92
SMG6-204ENST00000570606 E2F4Q16254 413 aa9.3□□□□□ -0.92
SMG6-204ENST00000570606 ARHGEF1Q92888 912 aaKnown RBP9.3□□□□□ -0.92
SMG6-204ENST00000570606 CRISPLD2Q9H0B8 497 aa9.3□□□□□ -0.92
SMG6-204ENST00000570606 THRAP3Q9Y2W1 955 aaKnown RBP9.3□□□□□ -0.92
SMG6-204ENST00000570606 SBF2Q86WG5 1849 aa9.3□□□□□ -0.92
SMG6-204ENST00000570606 OVOS2A0A0G2JMS6 1433 aa9.3□□□□□ -0.92
SMG6-204ENST00000570606 OVOS2A0A0J9YW53 1432 aa9.3□□□□□ -0.92
SMG6-204ENST00000570606 OVOS2Q6IE36 1432 aa9.3□□□□□ -0.92
SMG6-204ENST00000570606 COL18A1P39060 1754 aa9.29□□□□□ -0.92
SMG6-204ENST00000570606 MON2Q7Z3U7 1717 aa9.29□□□□□ -0.92
SMG6-204ENST00000570606 PEAK1Q9H792 1746 aa9.29□□□□□ -0.92
SMG6-204ENST00000570606 MFSD10Q14728 455 aa9.29□□□□□ -0.92
SMG6-204ENST00000570606 L3MBTL2Q969R5 705 aa9.29□□□□□ -0.92
SMG6-204ENST00000570606 CAMKK2Q96RR4 588 aa9.29□□□□□ -0.92
SMG6-204ENST00000570606 CABP1Q9NZU7 370 aa9.29□□□□□ -0.92
SMG6-204ENST00000570606 CPSF1Q10570 1443 aaKnown RBP9.29□□□□□ -0.92
SMG6-204ENST00000570606 AATKQ6ZMQ8 1374 aa9.28□□□□□ -0.92
SMG6-204ENST00000570606 PDE4AP27815 886 aa9.27□□□□□ -0.93
SMG6-204ENST00000570606 EVX2Q03828 476 aa9.27□□□□□ -0.93
SMG6-204ENST00000570606 NEUROD1Q13562 356 aa9.27□□□□□ -0.93
SMG6-204ENST00000570606 TOM1L2Q6ZVM7 507 aa9.27□□□□□ -0.93
SMG6-204ENST00000570606 C11orf95C9JLR9 678 aaPredicted RBP9.26□□□□□ -0.93
SMG6-204ENST00000570606 CLCN6P51797 869 aa9.26□□□□□ -0.93
SMG6-204ENST00000570606 NBPF14Q5TI25 921 aa9.26□□□□□ -0.93
SMG6-204ENST00000570606 SIN3AQ96ST3 1273 aa9.26□□□□□ -0.93
SMG6-204ENST00000570606 LARP6Q9BRS8 491 aaKnown RBP9.26□□□□□ -0.93
SMG6-204ENST00000570606 TRIM35Q9UPQ4 493 aa9.26□□□□□ -0.93
SMG6-204ENST00000570606 KAT6BQ8WYB5 2073 aa9.26□□□□□ -0.93
SMG6-204ENST00000570606 LTN1O94822 1766 aa9.26□□□□□ -0.93
SMG6-204ENST00000570606 TTC21BQ7Z4L5 1316 aa9.26□□□□□ -0.93
SMG6-204ENST00000570606 NFAT5O94916 1531 aa9.26□□□□□ -0.93
SMG6-204ENST00000570606 ABCC6O95255 1503 aa9.26□□□□□ -0.93
SMG6-204ENST00000570606 KTN1Q86UP2 1357 aaKnown RBP9.25□□□□□ -0.93
SMG6-204ENST00000570606 HAX1O00165 279 aa9.25□□□□□ -0.93
SMG6-204ENST00000570606 CSB-PGBD3P0DP91 1061 aa9.25□□□□□ -0.93
SMG6-204ENST00000570606 DDB1Q16531 1140 aa9.25□□□□□ -0.93
SMG6-204ENST00000570606 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.25□□□□□ -0.93
SMG6-204ENST00000570606 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.25□□□□□ -0.93
SMG6-204ENST00000570606 USP54Q70EL1 1684 aa9.25□□□□□ -0.93
SMG6-204ENST00000570606 WDR17Q8IZU2 1322 aa9.25□□□□□ -0.93
SMG6-204ENST00000570606 TTC21AQ8NDW8 1320 aa9.25□□□□□ -0.93
SMG6-204ENST00000570606 KCNH5Q8NCM2 988 aa9.24□□□□□ -0.93
SMG6-204ENST00000570606 DDX27Q96GQ7 796 aaKnown RBP9.23□□□□□ -0.93
SMG6-204ENST00000570606 PPP1R1BQ9UD71 204 aaPredicted RBP9.23□□□□□ -0.93
SMG6-204ENST00000570606 SBNO2Q9Y2G9 1366 aa9.23□□□□□ -0.93
SMG6-204ENST00000570606 TNS2Q63HR2 1409 aa9.22□□□□□ -0.93
SMG6-204ENST00000570606 CASZ1Q86V15 1759 aa9.22□□□□□ -0.93
SMG6-204ENST00000570606 ARHGEF25Q86VW2 580 aa9.22□□□□□ -0.93
SMG6-204ENST00000570606 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.22□□□□□ -0.93
SMG6-204ENST00000570606 CDCA7Q9BWT1 371 aaPredicted RBP9.22□□□□□ -0.93
SMG6-204ENST00000570606 AXIN2Q9Y2T1 843 aa9.22□□□□□ -0.93
SMG6-204ENST00000570606 NHSQ6T4R5 1651 aa9.22□□□□□ -0.93
SMG6-204ENST00000570606 CCDC7Q96M83 1385 aa9.22□□□□□ -0.93
SMG6-204ENST00000570606 CAMK2BQ13554 666 aa9.21□□□□□ -0.94
SMG6-204ENST00000570606 CARD10Q9BWT7 1032 aa9.21□□□□□ -0.94
SMG6-204ENST00000570606 CARD11Q9BXL7 1154 aa9.21□□□□□ -0.94
SMG6-204ENST00000570606 ARIH1Q9Y4X5 557 aaPredicted RBP9.21□□□□□ -0.94
SMG6-204ENST00000570606 TONSLQ96HA7 1378 aa9.21□□□□□ -0.94
SMG6-204ENST00000570606 FAM208AQ9UK61 1670 aaKnown RBP9.2□□□□□ -0.94
SMG6-204ENST00000570606 ATN1P54259 1190 aaPredicted RBP9.2□□□□□ -0.94
SMG6-204ENST00000570606 HDGFL2Q7Z4V5 671 aaPredicted RBP9.2□□□□□ -0.94
SMG6-204ENST00000570606 PDCD7Q8N8D1 485 aaKnown RBP9.2□□□□□ -0.94
SMG6-204ENST00000570606 MARCH10Q8NA82 808 aaPredicted RBP9.2□□□□□ -0.94
SMG6-204ENST00000570606 TMC1Q8TDI8 760 aa9.2□□□□□ -0.94
SMG6-204ENST00000570606 SPON1Q9HCB6 807 aa9.2□□□□□ -0.94
SMG6-204ENST00000570606 BCL9O00512 1426 aa9.2□□□□□ -0.94
SMG6-204ENST00000570606 BTAF1O14981 1849 aa9.19□□□□□ -0.94
SMG6-204ENST00000570606 TESPA1A2RU30 521 aaPredicted RBP9.19□□□□□ -0.94
SMG6-204ENST00000570606 SEMA3EO15041 775 aa9.19□□□□□ -0.94
SMG6-204ENST00000570606 PLSCR1O15162 318 aa9.19□□□□□ -0.94
SMG6-204ENST00000570606 DPY19L2Q6NUT2 758 aa9.19□□□□□ -0.94
SMG6-204ENST00000570606 POTEHQ6S545 545 aa9.19□□□□□ -0.94
SMG6-204ENST00000570606 ANO8Q9HCE9 1232 aaPredicted RBP9.19□□□□□ -0.94
SMG6-204ENST00000570606 NINLQ9Y2I6 1382 aa9.19□□□□□ -0.94
SMG6-204ENST00000570606 EDC4Q6P2E9 1401 aaKnown RBP9.19□□□□□ -0.94
SMG6-204ENST00000570606 CD163L1Q9NR16 1453 aa9.19□□□□□ -0.94
SMG6-204ENST00000570606 MYOM1P52179 1685 aa9.19□□□□□ -0.94
SMG6-204ENST00000570606 EXOC5O00471 708 aa9.18□□□□□ -0.94
SMG6-204ENST00000570606 ATMINO43313 823 aaPredicted RBP9.18□□□□□ -0.94
SMG6-204ENST00000570606 KCNQ2O43526 872 aa9.18□□□□□ -0.94
SMG6-204ENST00000570606 ERBB3P21860 1342 aa9.18□□□□□ -0.94
SMG6-204ENST00000570606 ASTLQ6HA08 431 aaPredicted RBP9.18□□□□□ -0.94
SMG6-204ENST00000570606 USP31Q70CQ4 1352 aa9.18□□□□□ -0.94
SMG6-204ENST00000570606 PTF1AQ7RTS3 328 aa9.18□□□□□ -0.94
SMG6-204ENST00000570606 NME9Q86XW9 330 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms