RNA–Protein interactions for RNA: ENST00000570360.1

ITGAE-202, Transcript of integrin subunit alpha E, humanhuman

TSL 2

Gene ITGAE, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAE-202ENST00000570360 PHACTR3Q96KR7 559 aa22.66■■□□□ 1.22
ITGAE-202ENST00000570360 BRWD3Q6RI45 1802 aa22.66■■□□□ 1.22
ITGAE-202ENST00000570360 IL2RBP14784 551 aa22.65■■□□□ 1.22
ITGAE-202ENST00000570360 BARGINQ6ZT62 677 aa22.65■■□□□ 1.22
ITGAE-202ENST00000570360 RAPGEF4Q8WZA2 1011 aa22.65■■□□□ 1.22
ITGAE-202ENST00000570360 QTRT2Q9H974 415 aaKnown RBP22.65■■□□□ 1.22
ITGAE-202ENST00000570360 TATP17735 454 aaPredicted RBP22.63■■□□□ 1.21
ITGAE-202ENST00000570360 PNNQ9H307 717 aaKnown RBP22.63■■□□□ 1.21
ITGAE-202ENST00000570360 TNS2Q63HR2 1409 aa22.63■■□□□ 1.21
ITGAE-202ENST00000570360 MAPK8IP3Q9UPT6 1336 aa22.62■■□□□ 1.21
ITGAE-202ENST00000570360 ADAMTS7Q9UKP4 1686 aa22.62■■□□□ 1.21
ITGAE-202ENST00000570360 SCN11AQ9UI33 1791 aa22.61■■□□□ 1.21
ITGAE-202ENST00000570360 FAM98CQ17RN3 349 aaKnown RBP22.6■■□□□ 1.21
ITGAE-202ENST00000570360 PHF23Q9BUL5 403 aaPredicted RBP22.6■■□□□ 1.21
ITGAE-202ENST00000570360 CDCA7Q9BWT1 371 aaPredicted RBP22.6■■□□□ 1.21
ITGAE-202ENST00000570360 MTHFSDQ2M296 383 aaKnown RBP22.59■■□□□ 1.21
ITGAE-202ENST00000570360 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.59■■□□□ 1.21
ITGAE-202ENST00000570360 TOGARAM1Q9Y4F4 1720 aa22.58■■□□□ 1.21
ITGAE-202ENST00000570360 APAF1O14727 1248 aa22.58■■□□□ 1.21
ITGAE-202ENST00000570360 PLEKHO1Q53GL0 409 aaPredicted RBP22.58■■□□□ 1.21
ITGAE-202ENST00000570360 ONECUT3O60422 494 aaPredicted RBP22.57■■□□□ 1.2
ITGAE-202ENST00000570360 NEFMP07197 916 aa22.57■■□□□ 1.2
ITGAE-202ENST00000570360 AMOTQ4VCS5 1084 aa22.57■■□□□ 1.2
ITGAE-202ENST00000570360 POTEAQ6S8J7 498 aa22.57■■□□□ 1.2
ITGAE-202ENST00000570360 SENP3-EIF4A1A0A087X0R7 540 aa22.56■■□□□ 1.2
ITGAE-202ENST00000570360 TMPOP42166 694 aaKnown RBP22.56■■□□□ 1.2
ITGAE-202ENST00000570360 RBM6P78332 1123 aaKnown RBP22.56■■□□□ 1.2
ITGAE-202ENST00000570360 NFE2L2Q16236 605 aa22.56■■□□□ 1.2
ITGAE-202ENST00000570360 DOT1LQ8TEK3 1739 aa22.55■■□□□ 1.2
ITGAE-202ENST00000570360 GAS2L2Q8NHY3 880 aa22.55■■□□□ 1.2
ITGAE-202ENST00000570360 ZCRB1Q8TBF4 217 aaKnown RBP22.55■■□□□ 1.2
ITGAE-202ENST00000570360 SPG7Q9UQ90 795 aa22.55■■□□□ 1.2
ITGAE-202ENST00000570360 RRP7AQ9Y3A4 280 aaKnown RBP22.55■■□□□ 1.2
ITGAE-202ENST00000570360 SIPA1L3O60292 1781 aaPredicted RBP22.55■■□□□ 1.2
ITGAE-202ENST00000570360 ZNF530Q6P9A1 599 aaPredicted RBP22.54■■□□□ 1.2
ITGAE-202ENST00000570360 PCDH11XQ9BZA7 1347 aa22.54■■□□□ 1.2
ITGAE-202ENST00000570360 PCDH11YQ9BZA8 1340 aa22.54■■□□□ 1.2
ITGAE-202ENST00000570360 MAP3K5Q99683 1374 aa22.53■■□□□ 1.2
ITGAE-202ENST00000570360 ITGB4P16144 1822 aa22.53■■□□□ 1.2
ITGAE-202ENST00000570360 CYP27B1O15528 508 aa22.53■■□□□ 1.2
ITGAE-202ENST00000570360 RGS12O14924 1447 aa22.53■■□□□ 1.2
ITGAE-202ENST00000570360 DDB1Q16531 1140 aa22.52■■□□□ 1.2
ITGAE-202ENST00000570360 KDM6AO15550 1401 aaPredicted RBP22.51■■□□□ 1.19
ITGAE-202ENST00000570360 PHKG2P15735 406 aa22.51■■□□□ 1.19
ITGAE-202ENST00000570360 SBF2Q86WG5 1849 aa22.51■■□□□ 1.19
ITGAE-202ENST00000570360 EXOC5O00471 708 aa22.5■■□□□ 1.19
ITGAE-202ENST00000570360 RXRBP28702 533 aa22.5■■□□□ 1.19
ITGAE-202ENST00000570360 RIPK4P57078 832 aa22.5■■□□□ 1.19
ITGAE-202ENST00000570360 HNRNPUQ00839 825 aaKnown RBP eCLIP22.5■■□□□ 1.19
ITGAE-202ENST00000570360 NEUROD2Q15784 382 aa22.5■■□□□ 1.19
ITGAE-202ENST00000570360 SEPT12Q8IYM1 358 aa22.5■■□□□ 1.19
ITGAE-202ENST00000570360 A0A0G2JS52 829 aa22.49■■□□□ 1.19
ITGAE-202ENST00000570360 MYT1Q01538 1121 aa22.49■■□□□ 1.19
ITGAE-202ENST00000570360 NCBP3Q53F19 620 aaKnown RBP22.49■■□□□ 1.19
ITGAE-202ENST00000570360 AKAP4Q5JQC9 854 aa22.49■■□□□ 1.19
ITGAE-202ENST00000570360 TRIM35Q9UPQ4 493 aa22.49■■□□□ 1.19
ITGAE-202ENST00000570360 MRC1P22897 1456 aa22.48■■□□□ 1.19
ITGAE-202ENST00000570360 IFNL2Q8IZJ0 200 aa22.48■■□□□ 1.19
ITGAE-202ENST00000570360 GNAT3A8MTJ3 354 aa22.47■■□□□ 1.19
ITGAE-202ENST00000570360 C1orf141Q5JVX7 400 aa22.47■■□□□ 1.19
ITGAE-202ENST00000570360 DDX54Q8TDD1 881 aaKnown RBP22.47■■□□□ 1.19
ITGAE-202ENST00000570360 CCDC27Q2M243 656 aa22.46■■□□□ 1.19
ITGAE-202ENST00000570360 NGEFQ8N5V2 710 aa22.46■■□□□ 1.19
ITGAE-202ENST00000570360 MARCH10Q8NA82 808 aaPredicted RBP22.46■■□□□ 1.19
ITGAE-202ENST00000570360 SALL2Q9Y467 1007 aaPredicted RBP22.46■■□□□ 1.19
ITGAE-202ENST00000570360 ZNF521Q96K83 1311 aa22.46■■□□□ 1.19
ITGAE-202ENST00000570360 KAT6BQ8WYB5 2073 aa22.45■■□□□ 1.18
ITGAE-202ENST00000570360 NKX1-1Q15270 411 aaPredicted RBP22.45■■□□□ 1.18
ITGAE-202ENST00000570360 CEMIPQ8WUJ3 1361 aa22.45■■□□□ 1.18
ITGAE-202ENST00000570360 NHSQ6T4R5 1651 aa22.45■■□□□ 1.18
ITGAE-202ENST00000570360 HTATSF1O43719 755 aaKnown RBP22.44■■□□□ 1.18
ITGAE-202ENST00000570360 LMOD3Q0VAK6 560 aa22.44■■□□□ 1.18
ITGAE-202ENST00000570360 YTHDC1Q96MU7 727 aaKnown RBP22.44■■□□□ 1.18
ITGAE-202ENST00000570360 KDM3BQ7LBC6 1761 aa22.43■■□□□ 1.18
ITGAE-202ENST00000570360 DCTN1Q14203 1278 aa22.43■■□□□ 1.18
ITGAE-202ENST00000570360 MPRIPQ6WCQ1 1025 aa22.43■■□□□ 1.18
ITGAE-202ENST00000570360 MCM10Q7L590 875 aa22.43■■□□□ 1.18
ITGAE-202ENST00000570360 WWC1Q8IX03 1113 aa22.43■■□□□ 1.18
ITGAE-202ENST00000570360 IL17REQ8NFR9 667 aa22.43■■□□□ 1.18
ITGAE-202ENST00000570360 THUMPD2Q9BTF0 503 aaKnown RBP22.43■■□□□ 1.18
ITGAE-202ENST00000570360 PAPPAQ13219 1627 aa22.42■■□□□ 1.18
ITGAE-202ENST00000570360 ZBED9Q6R2W3 1325 aa22.42■■□□□ 1.18
ITGAE-202ENST00000570360 RNMTO43148 476 aaKnown RBP22.42■■□□□ 1.18
ITGAE-202ENST00000570360 HSP90AB1P08238 724 aaKnown RBP22.42■■□□□ 1.18
ITGAE-202ENST00000570360 PDE3BQ13370 1112 aa22.42■■□□□ 1.18
ITGAE-202ENST00000570360 LGR6Q9HBX8 967 aa22.42■■□□□ 1.18
ITGAE-202ENST00000570360 DCAF5Q96JK2 942 aa22.41■■□□□ 1.18
ITGAE-202ENST00000570360 BCL9O00512 1426 aa22.4■■□□□ 1.18
ITGAE-202ENST00000570360 RTF1Q92541 710 aaKnown RBP22.4■■□□□ 1.18
ITGAE-202ENST00000570360 BTAF1O14981 1849 aa22.38■■□□□ 1.17
ITGAE-202ENST00000570360 KRT27Q7Z3Y8 459 aa22.38■■□□□ 1.17
ITGAE-202ENST00000570360 UBR2Q8IWV8 1755 aa22.38■■□□□ 1.17
ITGAE-202ENST00000570360 FAM182BQ5T319 152 aa22.36■■□□□ 1.17
ITGAE-202ENST00000570360 WDR63Q8IWG1 891 aa22.34■■□□□ 1.17
ITGAE-202ENST00000570360 SLC52A2Q9HAB3 445 aa22.34■■□□□ 1.17
ITGAE-202ENST00000570360 TNS1Q9HBL0 1735 aaKnown RBP22.34■■□□□ 1.17
ITGAE-202ENST00000570360 IL16Q14005 1332 aa22.33■■□□□ 1.17
ITGAE-202ENST00000570360 ERVV-2B6SEH9 535 aa22.33■■□□□ 1.17
ITGAE-202ENST00000570360 SPINK5Q9NQ38 1064 aaPredicted RBP22.32■■□□□ 1.16
ITGAE-202ENST00000570360 ZNF853P0CG23 659 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms