RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 ZNF385CQ66K41 422 aaPredicted RBP6.72□□□□□ -1.33
UBR1-211ENST00000569971 CCDC125Q86Z20 511 aa6.72□□□□□ -1.33
UBR1-211ENST00000569971 SEPT12Q8IYM1 358 aa6.72□□□□□ -1.33
UBR1-211ENST00000569971 SVOPQ8N4V2 548 aa6.72□□□□□ -1.33
UBR1-211ENST00000569971 RNF217Q8TC41 542 aa6.72□□□□□ -1.33
UBR1-211ENST00000569971 IGHA1P01876 353 aa6.71□□□□□ -1.34
UBR1-211ENST00000569971 ADH1AP07327 375 aa6.71□□□□□ -1.34
UBR1-211ENST00000569971 USP17L8P0C7I0 530 aa6.71□□□□□ -1.34
UBR1-211ENST00000569971 FOXK2Q01167 660 aa6.71□□□□□ -1.34
UBR1-211ENST00000569971 KANK3Q6NY19 840 aa6.71□□□□□ -1.34
UBR1-211ENST00000569971 GMCL1Q96IK5 515 aa6.71□□□□□ -1.34
UBR1-211ENST00000569971 PRM3Q9NNZ6 103 aa6.71□□□□□ -1.34
UBR1-211ENST00000569971 DNMT3AQ9Y6K1 912 aaPredicted RBP6.71□□□□□ -1.34
UBR1-211ENST00000569971 FIGNL2A6NMB9 653 aa6.7□□□□□ -1.34
UBR1-211ENST00000569971 ARHGEF15O94989 841 aa6.7□□□□□ -1.34
UBR1-211ENST00000569971 CTSOP43234 321 aaPredicted RBP6.7□□□□□ -1.34
UBR1-211ENST00000569971 SUZ12Q15022 739 aaKnown RBP6.7□□□□□ -1.34
UBR1-211ENST00000569971 WWC1Q8IX03 1113 aa6.7□□□□□ -1.34
UBR1-211ENST00000569971 KCTD17Q8N5Z5 321 aa6.7□□□□□ -1.34
UBR1-211ENST00000569971 ADAM32Q8TC27 787 aa6.7□□□□□ -1.34
UBR1-211ENST00000569971 LRRN4Q8WUT4 740 aa6.7□□□□□ -1.34
UBR1-211ENST00000569971 OCSTAMPQ9BR26 566 aa6.7□□□□□ -1.34
UBR1-211ENST00000569971 POM121CA8CG34 1229 aa6.69□□□□□ -1.34
UBR1-211ENST00000569971 ESPNB1AK53 854 aa6.69□□□□□ -1.34
UBR1-211ENST00000569971 SOCS7O14512 581 aa6.69□□□□□ -1.34
UBR1-211ENST00000569971 NR6A1Q15406 480 aa6.69□□□□□ -1.34
UBR1-211ENST00000569971 RNFT1Q5M7Z0 435 aa6.69□□□□□ -1.34
UBR1-211ENST00000569971 GJD4Q96KN9 370 aaPredicted RBP6.69□□□□□ -1.34
UBR1-211ENST00000569971 INSM2Q96T92 566 aaPredicted RBP6.69□□□□□ -1.34
UBR1-211ENST00000569971 POLMQ9NP87 494 aaPredicted RBP6.69□□□□□ -1.34
UBR1-211ENST00000569971 SENP3-EIF4A1A0A087X0R7 540 aa6.68□□□□□ -1.34
UBR1-211ENST00000569971 RELBQ01201 579 aa6.68□□□□□ -1.34
UBR1-211ENST00000569971 SRSF11Q05519 484 aaKnown RBP6.68□□□□□ -1.34
UBR1-211ENST00000569971 ZNF784Q8NCA9 323 aaPredicted RBP6.68□□□□□ -1.34
UBR1-211ENST00000569971 SCARF2Q96GP6 870 aaPredicted RBP6.68□□□□□ -1.34
UBR1-211ENST00000569971 CALR3Q96L12 384 aaKnown RBP6.68□□□□□ -1.34
UBR1-211ENST00000569971 NISCHQ9Y2I1 1504 aa6.67□□□□□ -1.34
UBR1-211ENST00000569971 GPC1P35052 558 aa6.67□□□□□ -1.34
UBR1-211ENST00000569971 PTGIRP43119 386 aa6.67□□□□□ -1.34
UBR1-211ENST00000569971 IRF5Q13568 498 aa6.67□□□□□ -1.34
UBR1-211ENST00000569971 VWA5B2Q8N398 1253 aa6.67□□□□□ -1.34
UBR1-211ENST00000569971 HMX1Q9NP08 348 aaPredicted RBP6.67□□□□□ -1.34
UBR1-211ENST00000569971 CDC14CA4D256 554 aa6.66□□□□□ -1.34
UBR1-211ENST00000569971 LILRA1O75019 489 aa6.66□□□□□ -1.34
UBR1-211ENST00000569971 FOXD4L5Q5VV16 416 aaPredicted RBP6.66□□□□□ -1.34
UBR1-211ENST00000569971 LYSMD3Q7Z3D4 306 aa6.66□□□□□ -1.34
UBR1-211ENST00000569971 DZIP3Q86Y13 1208 aaKnown RBP6.66□□□□□ -1.34
UBR1-211ENST00000569971 ZNF592Q92610 1267 aa6.66□□□□□ -1.34
UBR1-211ENST00000569971 AGBL1Q96MI9 1066 aa6.66□□□□□ -1.34
UBR1-211ENST00000569971 TRIM34Q9BYJ4 488 aa6.66□□□□□ -1.34
UBR1-211ENST00000569971 RNF144AP50876 292 aaPredicted RBP6.65□□□□□ -1.34
UBR1-211ENST00000569971 MAP3K10Q02779 954 aa6.65□□□□□ -1.34
UBR1-211ENST00000569971 GLMNQ92990 594 aa6.65□□□□□ -1.34
UBR1-211ENST00000569971 ENAMQ9NRM1 1142 aa6.65□□□□□ -1.34
UBR1-211ENST00000569971 LRRC4BQ9NT99 713 aa6.65□□□□□ -1.34
UBR1-211ENST00000569971 NDUFB9Q9Y6M9 179 aa6.65□□□□□ -1.34
UBR1-211ENST00000569971 ERVH48-1M5A8F1 160 aa6.64□□□□□ -1.35
UBR1-211ENST00000569971 ADAMTS2O95450 1211 aa6.64□□□□□ -1.35
UBR1-211ENST00000569971 MARSP56192 900 aaKnown RBP6.64□□□□□ -1.35
UBR1-211ENST00000569971 HDGFL1Q5TGJ6 251 aa6.64□□□□□ -1.35
UBR1-211ENST00000569971 KDF1Q8NAX2 398 aaPredicted RBP6.64□□□□□ -1.35
UBR1-211ENST00000569971 ZBTB7CA1YPR0 619 aa6.63□□□□□ -1.35
UBR1-211ENST00000569971 GPR37L1O60883 481 aa6.63□□□□□ -1.35
UBR1-211ENST00000569971 ADAMTS19Q8TE59 1207 aa6.63□□□□□ -1.35
UBR1-211ENST00000569971 EPS8L1Q8TE68 723 aa6.63□□□□□ -1.35
UBR1-211ENST00000569971 ZNF395Q9H8N7 513 aaPredicted RBP6.63□□□□□ -1.35
UBR1-211ENST00000569971 TMPRSS4Q9NRS4 437 aa6.63□□□□□ -1.35
UBR1-211ENST00000569971 MCCD1P59942 119 aaPredicted RBP6.62□□□□□ -1.35
UBR1-211ENST00000569971 FOXR1Q6PIV2 292 aa6.62□□□□□ -1.35
UBR1-211ENST00000569971 TRIM22Q8IYM9 498 aa6.62□□□□□ -1.35
UBR1-211ENST00000569971 WHAMMQ8TF30 809 aa6.62□□□□□ -1.35
UBR1-211ENST00000569971 TRAIPQ9BWF2 469 aa6.62□□□□□ -1.35
UBR1-211ENST00000569971 MBIPQ9NS73 344 aa6.62□□□□□ -1.35
UBR1-211ENST00000569971 H7C1W4 665 aa6.61□□□□□ -1.35
UBR1-211ENST00000569971 IRS1P35568 1242 aa6.61□□□□□ -1.35
UBR1-211ENST00000569971 ADD1P35611 737 aaKnown RBP6.61□□□□□ -1.35
UBR1-211ENST00000569971 VAC14Q08AM6 782 aa6.61□□□□□ -1.35
UBR1-211ENST00000569971 GAS6Q14393 721 aa6.61□□□□□ -1.35
UBR1-211ENST00000569971 WASHC4Q2M389 1173 aa6.61□□□□□ -1.35
UBR1-211ENST00000569971 WDR44Q5JSH3 913 aa6.61□□□□□ -1.35
UBR1-211ENST00000569971 RETREG2Q8NC44 543 aa6.61□□□□□ -1.35
UBR1-211ENST00000569971 ACIN1Q9UKV3 1341 aaKnown RBP6.6□□□□□ -1.35
UBR1-211ENST00000569971 PHF20L1A8MW92 1017 aa6.6□□□□□ -1.35
UBR1-211ENST00000569971 ATP5J2-PTCD1G3V325 749 aa6.6□□□□□ -1.35
UBR1-211ENST00000569971 PPP1R15AO75807 674 aaPredicted RBP6.6□□□□□ -1.35
UBR1-211ENST00000569971 RNF20Q5VTR2 975 aa6.6□□□□□ -1.35
UBR1-211ENST00000569971 ZNF837Q96EG3 531 aaPredicted RBP6.6□□□□□ -1.35
UBR1-211ENST00000569971 DYRK1BQ9Y463 629 aa6.6□□□□□ -1.35
UBR1-211ENST00000569971 ZBBXA8MT70 800 aa6.59□□□□□ -1.35
UBR1-211ENST00000569971 CELA2BP08218 269 aaPredicted RBP6.59□□□□□ -1.35
UBR1-211ENST00000569971 RFX1P22670 979 aa6.59□□□□□ -1.35
UBR1-211ENST00000569971 ERVK-9P63128 1117 aa6.59□□□□□ -1.35
UBR1-211ENST00000569971 LYPD4Q6UWN0 246 aa6.59□□□□□ -1.35
UBR1-211ENST00000569971 ALG2Q9H553 416 aa6.58□□□□□ -1.36
UBR1-211ENST00000569971 RAB15P59190 212 aa6.57□□□□□ -1.36
UBR1-211ENST00000569971 CC2D2BQ6DHV5 1058 aa6.57□□□□□ -1.36
UBR1-211ENST00000569971 GPAT2Q6NUI2 795 aa6.57□□□□□ -1.36
UBR1-211ENST00000569971 CYP2U1Q7Z449 544 aa6.57□□□□□ -1.36
UBR1-211ENST00000569971 PODNQ7Z5L7 613 aa6.57□□□□□ -1.36
UBR1-211ENST00000569971 AEBP1Q8IUX7 1158 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms