RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 TRAK2O60296 914 aa8.35□□□□□ -1.07
SMG1-217ENST00000569764 APBA3O96018 575 aa8.35□□□□□ -1.07
SMG1-217ENST00000569764 THRAP3Q9Y2W1 955 aaKnown RBP8.35□□□□□ -1.07
SMG1-217ENST00000569764 WDHD1O75717 1129 aaPredicted RBP8.35□□□□□ -1.07
SMG1-217ENST00000569764 LTKP29376 864 aa8.35□□□□□ -1.07
SMG1-217ENST00000569764 GPR162Q16538 588 aa8.35□□□□□ -1.07
SMG1-217ENST00000569764 PMFBP1Q8TBY8 1022 aa8.35□□□□□ -1.07
SMG1-217ENST00000569764 TTC21AQ8NDW8 1320 aa8.35□□□□□ -1.07
SMG1-217ENST00000569764 CC2D1BQ5T0F9 858 aaKnown RBP8.34□□□□□ -1.07
SMG1-217ENST00000569764 CFAP70Q5T0N1 1121 aa8.34□□□□□ -1.07
SMG1-217ENST00000569764 CIZ1Q9ULV3 898 aaPredicted RBP8.34□□□□□ -1.07
SMG1-217ENST00000569764 WASLO00401 505 aaPredicted RBP8.34□□□□□ -1.07
SMG1-217ENST00000569764 PER1O15534 1290 aaPredicted RBP8.34□□□□□ -1.07
SMG1-217ENST00000569764 GRIN3BO60391 1043 aa8.34□□□□□ -1.07
SMG1-217ENST00000569764 CCDC181Q5TID7 509 aa8.34□□□□□ -1.07
SMG1-217ENST00000569764 NUDT16Q96DE0 195 aaKnown RBP8.34□□□□□ -1.07
SMG1-217ENST00000569764 ARID4AP29374 1257 aaPredicted RBP8.34□□□□□ -1.07
SMG1-217ENST00000569764 TTC5Q8N0Z6 440 aa8.33□□□□□ -1.08
SMG1-217ENST00000569764 PTCH1Q13635 1447 aa8.33□□□□□ -1.08
SMG1-217ENST00000569764 PPLO60437 1756 aa8.33□□□□□ -1.08
SMG1-217ENST00000569764 CGNL1Q0VF96 1302 aa8.33□□□□□ -1.08
SMG1-217ENST00000569764 DHX16O60231 1041 aaKnown RBP8.33□□□□□ -1.08
SMG1-217ENST00000569764 TCP11L2Q8N4U5 519 aa8.33□□□□□ -1.08
SMG1-217ENST00000569764 CDK19Q9BWU1 502 aa8.33□□□□□ -1.08
SMG1-217ENST00000569764 ZFYVE27Q5T4F4 411 aa8.33□□□□□ -1.08
SMG1-217ENST00000569764 ADGRB3O60242 1522 aa8.33□□□□□ -1.08
SMG1-217ENST00000569764 RRP9O43818 475 aaKnown RBP8.32□□□□□ -1.08
SMG1-217ENST00000569764 GABBR1Q9UBS5 961 aa8.32□□□□□ -1.08
SMG1-217ENST00000569764 PDE6BP35913 854 aa8.32□□□□□ -1.08
SMG1-217ENST00000569764 LMOD3Q0VAK6 560 aa8.32□□□□□ -1.08
SMG1-217ENST00000569764 PLEKHO1Q53GL0 409 aaPredicted RBP8.32□□□□□ -1.08
SMG1-217ENST00000569764 GJD4Q96KN9 370 aaPredicted RBP8.32□□□□□ -1.08
SMG1-217ENST00000569764 PIK3C2BO00750 1634 aa8.32□□□□□ -1.08
SMG1-217ENST00000569764 MYOM1P52179 1685 aa8.32□□□□□ -1.08
SMG1-217ENST00000569764 MAPK8IP3Q9UPT6 1336 aa8.32□□□□□ -1.08
SMG1-217ENST00000569764 HSP90AA2PQ14568 343 aaPredicted RBP8.32□□□□□ -1.08
SMG1-217ENST00000569764 KDM4CQ9H3R0 1056 aa8.32□□□□□ -1.08
SMG1-217ENST00000569764 VGLL3A8MV65 326 aa8.32□□□□□ -1.08
SMG1-217ENST00000569764 CALD1Q05682 793 aaKnown RBP8.32□□□□□ -1.08
SMG1-217ENST00000569764 GIMAP6Q6P9H5 292 aa8.32□□□□□ -1.08
SMG1-217ENST00000569764 ZBTB47Q9UFB7 747 aaPredicted RBP8.32□□□□□ -1.08
SMG1-217ENST00000569764 SUPT16HQ9Y5B9 1047 aaKnown RBP8.32□□□□□ -1.08
SMG1-217ENST00000569764 NOS1P29475 1434 aa8.31□□□□□ -1.08
SMG1-217ENST00000569764 ZC3H6P61129 1189 aaKnown RBP8.31□□□□□ -1.08
SMG1-217ENST00000569764 CASC1Q6TDU7 716 aa8.31□□□□□ -1.08
SMG1-217ENST00000569764 GET4Q7L5D6 327 aaPredicted RBP8.31□□□□□ -1.08
SMG1-217ENST00000569764 MORC1Q86VD1 984 aa8.31□□□□□ -1.08
SMG1-217ENST00000569764 AK7Q96M32 723 aa8.31□□□□□ -1.08
SMG1-217ENST00000569764 AXDND1Q5T1B0 1012 aaPredicted RBP8.31□□□□□ -1.08
SMG1-217ENST00000569764 C14orf93Q9H972 538 aaKnown RBP8.31□□□□□ -1.08
SMG1-217ENST00000569764 BRINP3Q76B58 766 aa8.31□□□□□ -1.08
SMG1-217ENST00000569764 SEPT12Q8IYM1 358 aa8.31□□□□□ -1.08
SMG1-217ENST00000569764 ZBTB12Q9Y330 459 aaPredicted RBP8.31□□□□□ -1.08
SMG1-217ENST00000569764 NRXN1Q9ULB1 1477 aa8.3□□□□□ -1.08
SMG1-217ENST00000569764 NSD3Q9BZ95 1437 aa8.3□□□□□ -1.08
SMG1-217ENST00000569764 BEGAINQ9BUH8 593 aa8.3□□□□□ -1.08
SMG1-217ENST00000569764 HNRNPUQ00839 825 aaKnown RBP eCLIP8.3□□□□□ -1.08
SMG1-217ENST00000569764 LTV1Q96GA3 475 aaPredicted RBP8.3□□□□□ -1.08
SMG1-217ENST00000569764 ZNF830Q96NB3 372 aaPredicted RBP8.3□□□□□ -1.08
SMG1-217ENST00000569764 MRS2Q9HD23 443 aa8.3□□□□□ -1.08
SMG1-217ENST00000569764 BTG4Q9NY30 223 aa8.3□□□□□ -1.08
SMG1-217ENST00000569764 TESPA1A2RU30 521 aaPredicted RBP8.3□□□□□ -1.08
SMG1-217ENST00000569764 SH3BP1Q9Y3L3 701 aa8.3□□□□□ -1.08
SMG1-217ENST00000569764 TMEM132EQ6IEE7 984 aa8.29□□□□□ -1.08
SMG1-217ENST00000569764 ABCC11Q96J66 1382 aa8.29□□□□□ -1.08
SMG1-217ENST00000569764 RGS3P49796 1198 aa8.29□□□□□ -1.08
SMG1-217ENST00000569764 ADAMTSL3P82987 1691 aa8.29□□□□□ -1.08
SMG1-217ENST00000569764 NEURL4Q96JN8 1562 aa8.29□□□□□ -1.08
SMG1-217ENST00000569764 KIAA1210Q9ULL0 1709 aa8.29□□□□□ -1.08
SMG1-217ENST00000569764 A0A087WZG4 1122 aa8.29□□□□□ -1.08
SMG1-217ENST00000569764 TEFQ10587 303 aa8.29□□□□□ -1.08
SMG1-217ENST00000569764 ADGRL3Q9HAR2 1447 aa8.29□□□□□ -1.08
SMG1-217ENST00000569764 SPATA31D1Q6ZQQ2 1576 aa8.29□□□□□ -1.08
SMG1-217ENST00000569764 NINLQ9Y2I6 1382 aa8.29□□□□□ -1.08
SMG1-217ENST00000569764 XPCQ01831 940 aaPredicted RBP8.29□□□□□ -1.08
SMG1-217ENST00000569764 VPS72Q15906 364 aa8.29□□□□□ -1.08
SMG1-217ENST00000569764 NME8Q8N427 588 aa8.29□□□□□ -1.08
SMG1-217ENST00000569764 SLC16A10Q8TF71 515 aa8.29□□□□□ -1.08
SMG1-217ENST00000569764 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.29□□□□□ -1.08
SMG1-217ENST00000569764 SEMA3FQ13275 785 aa8.28□□□□□ -1.08
SMG1-217ENST00000569764 PANK3Q9H999 370 aa8.28□□□□□ -1.08
SMG1-217ENST00000569764 ADGRB1O14514 1584 aa8.28□□□□□ -1.08
SMG1-217ENST00000569764 MYO3AQ8NEV4 1616 aa8.28□□□□□ -1.08
SMG1-217ENST00000569764 WDR43Q15061 677 aaKnown RBP eCLIP8.28□□□□□ -1.08
SMG1-217ENST00000569764 PDZRN3Q9UPQ7 1066 aa8.28□□□□□ -1.08
SMG1-217ENST00000569764 MYOM2P54296 1465 aa8.28□□□□□ -1.08
SMG1-217ENST00000569764 PARD3Q8TEW0 1356 aa8.28□□□□□ -1.08
SMG1-217ENST00000569764 SPOCK3Q9BQ16 436 aa8.28□□□□□ -1.08
SMG1-217ENST00000569764 MTA3Q9BTC8 594 aa8.28□□□□□ -1.08
SMG1-217ENST00000569764 NEXMIFQ5QGS0 1516 aa8.28□□□□□ -1.08
SMG1-217ENST00000569764 KRBA2Q6ZNG9 492 aa8.27□□□□□ -1.09
SMG1-217ENST00000569764 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.27□□□□□ -1.09
SMG1-217ENST00000569764 ZC3H13Q5T200 1668 aaKnown RBP8.27□□□□□ -1.09
SMG1-217ENST00000569764 BARGINQ6ZT62 677 aa8.27□□□□□ -1.09
SMG1-217ENST00000569764 CLTCQ00610 1675 aaKnown RBP8.27□□□□□ -1.09
SMG1-217ENST00000569764 PIK3C2GO75747 1445 aa8.27□□□□□ -1.09
SMG1-217ENST00000569764 ATL2Q8NHH9 583 aa8.27□□□□□ -1.09
SMG1-217ENST00000569764 ANP32BQ92688 251 aaKnown RBP8.27□□□□□ -1.09
SMG1-217ENST00000569764 TFCP2L1Q9NZI6 479 aa8.27□□□□□ -1.09
SMG1-217ENST00000569764 TMEM131LA2VDJ0 1609 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms