RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 RTL1A6NKG5 1358 aa21.51■■□□□ 1.03
USB1-215ENST00000569252 HSP90AB2PQ58FF8 381 aa21.5■■□□□ 1.03
USB1-215ENST00000569252 ATF5Q9Y2D1 282 aaPredicted RBP21.5■■□□□ 1.03
USB1-215ENST00000569252 SMG6Q86US8 1419 aaKnown RBP21.49■■□□□ 1.03
USB1-215ENST00000569252 ANKRD24Q8TF21 1146 aa21.49■■□□□ 1.03
USB1-215ENST00000569252 BCL11BQ9C0K0 894 aaPredicted RBP21.49■■□□□ 1.03
USB1-215ENST00000569252 WDR17Q8IZU2 1322 aa21.49■■□□□ 1.03
USB1-215ENST00000569252 RGPD3A6NKT7 1758 aaPredicted RBP21.48■■□□□ 1.03
USB1-215ENST00000569252 RGPD4Q7Z3J3 1758 aa21.48■■□□□ 1.03
USB1-215ENST00000569252 MAP2P11137 1827 aaKnown RBP21.48■■□□□ 1.03
USB1-215ENST00000569252 DIAPH1O60610 1272 aaKnown RBP21.47■■□□□ 1.03
USB1-215ENST00000569252 NUDCQ9Y266 331 aa21.47■■□□□ 1.03
USB1-215ENST00000569252 INSRP06213 1382 aa21.47■■□□□ 1.03
USB1-215ENST00000569252 LTN1O94822 1766 aa21.46■■□□□ 1.03
USB1-215ENST00000569252 PLSCR1O15162 318 aa21.45■■□□□ 1.02
USB1-215ENST00000569252 ACSBG1Q96GR2 724 aa21.45■■□□□ 1.02
USB1-215ENST00000569252 NLRP2Q9NX02 1062 aa21.45■■□□□ 1.02
USB1-215ENST00000569252 PTGER2P43116 358 aa21.44■■□□□ 1.02
USB1-215ENST00000569252 ABCC6O95255 1503 aa21.44■■□□□ 1.02
USB1-215ENST00000569252 TXNRD1Q16881 649 aa21.43■■□□□ 1.02
USB1-215ENST00000569252 ERBB3P21860 1342 aa21.42■■□□□ 1.02
USB1-215ENST00000569252 EIF4A2Q14240 407 aaKnown RBP21.42■■□□□ 1.02
USB1-215ENST00000569252 U2SURPO15042 1029 aaKnown RBP21.4■■□□□ 1.02
USB1-215ENST00000569252 CARD10Q9BWT7 1032 aa21.4■■□□□ 1.02
USB1-215ENST00000569252 IL13P35225 146 aa21.38■■□□□ 1.01
USB1-215ENST00000569252 MRS2Q9HD23 443 aa21.38■■□□□ 1.01
USB1-215ENST00000569252 STK32BQ9NY57 414 aa21.38■■□□□ 1.01
USB1-215ENST00000569252 WDR43Q15061 677 aaKnown RBP eCLIP21.37■■□□□ 1.01
USB1-215ENST00000569252 SLC15A2Q16348 729 aa21.37■■□□□ 1.01
USB1-215ENST00000569252 FHDC1Q9C0D6 1143 aaPredicted RBP21.37■■□□□ 1.01
USB1-215ENST00000569252 TNS2Q63HR2 1409 aa21.37■■□□□ 1.01
USB1-215ENST00000569252 EXOC5O00471 708 aa21.36■■□□□ 1.01
USB1-215ENST00000569252 MIER1Q8N108 512 aa21.36■■□□□ 1.01
USB1-215ENST00000569252 NHSQ6T4R5 1651 aa21.36■■□□□ 1.01
USB1-215ENST00000569252 U2AF1L5P0DN76 240 aaPredicted RBP21.35■■□□□ 1.01
USB1-215ENST00000569252 U2AF1Q01081 240 aaKnown RBP eCLIP21.35■■□□□ 1.01
USB1-215ENST00000569252 NBPF6Q5VWK0 638 aa21.35■■□□□ 1.01
USB1-215ENST00000569252 NBPF4Q96M43 638 aa21.35■■□□□ 1.01
USB1-215ENST00000569252 EYA1Q99502 592 aa21.35■■□□□ 1.01
USB1-215ENST00000569252 PNNQ9H307 717 aaKnown RBP21.35■■□□□ 1.01
USB1-215ENST00000569252 BCL9O00512 1426 aa21.35■■□□□ 1.01
USB1-215ENST00000569252 KAT6BQ8WYB5 2073 aa21.34■■□□□ 1.01
USB1-215ENST00000569252 DCAF8L1A6NGE4 600 aa21.34■■□□□ 1.01
USB1-215ENST00000569252 CCER2I3L3R5 266 aa21.34■■□□□ 1.01
USB1-215ENST00000569252 NEFMP07197 916 aa21.34■■□□□ 1.01
USB1-215ENST00000569252 ZNF827Q17R98 1081 aa21.34■■□□□ 1.01
USB1-215ENST00000569252 SULT6B1Q6IMI4 303 aa21.33■■□□□ 1.01
USB1-215ENST00000569252 RAPGEF4Q8WZA2 1011 aa21.33■■□□□ 1.01
USB1-215ENST00000569252 SYT17Q9BSW7 474 aa21.33■■□□□ 1.01
USB1-215ENST00000569252 CDCA7Q9BWT1 371 aaPredicted RBP21.33■■□□□ 1.01
USB1-215ENST00000569252 BTAF1O14981 1849 aa21.33■■□□□ 1.01
USB1-215ENST00000569252 PAPPAQ13219 1627 aa21.33■■□□□ 1
USB1-215ENST00000569252 USHBP1Q8N6Y0 703 aa21.32■■□□□ 1
USB1-215ENST00000569252 KCNQ4P56696 695 aa21.31■■□□□ 1
USB1-215ENST00000569252 ZNF784Q8NCA9 323 aaPredicted RBP21.31■■□□□ 1
USB1-215ENST00000569252 SGIP1Q9BQI5 828 aa21.31■■□□□ 1
USB1-215ENST00000569252 IL2RBP14784 551 aa21.3■■□□□ 1
USB1-215ENST00000569252 TATP17735 454 aaPredicted RBP21.3■■□□□ 1
USB1-215ENST00000569252 HMOX1P09601 288 aa21.29■■□□□ 1
USB1-215ENST00000569252 LRRC4BQ9NT99 713 aa21.29■■□□□ 1
USB1-215ENST00000569252 IGSF1Q8N6C5 1336 aa21.29■■□□□ 1
USB1-215ENST00000569252 FCHSD2O94868 740 aa21.28■■□□□ 1
USB1-215ENST00000569252 GOLGB1Q14789 3259 aaKnown RBP21.27■■□□□ 1
USB1-215ENST00000569252 MTFR1LQ9H019 292 aa21.27■■□□□ 1
USB1-215ENST00000569252 FAM208AQ9UK61 1670 aaKnown RBP21.26■□□□□ 0.99
USB1-215ENST00000569252 CCDC184Q52MB2 194 aa21.26■□□□□ 0.99
USB1-215ENST00000569252 KLHL34Q8N239 644 aa21.26■□□□□ 0.99
USB1-215ENST00000569252 COL3A1P02461 1466 aaPredicted RBP21.25■□□□□ 0.99
USB1-215ENST00000569252 PLEKHO1Q53GL0 409 aaPredicted RBP21.24■□□□□ 0.99
USB1-215ENST00000569252 FAM9BQ8IZU0 186 aa21.24■□□□□ 0.99
USB1-215ENST00000569252 ARXQ96QS3 562 aa21.24■□□□□ 0.99
USB1-215ENST00000569252 SPG7Q9UQ90 795 aa21.24■□□□□ 0.99
USB1-215ENST00000569252 TUBGCP6Q96RT7 1819 aa21.23■□□□□ 0.99
USB1-215ENST00000569252 AMOTQ4VCS5 1084 aa21.23■□□□□ 0.99
USB1-215ENST00000569252 AEBP1Q8IUX7 1158 aa21.23■□□□□ 0.99
USB1-215ENST00000569252 PNISRQ8TF01 805 aaKnown RBP21.23■□□□□ 0.99
USB1-215ENST00000569252 ADAMTS8Q9UP79 889 aa21.23■□□□□ 0.99
USB1-215ENST00000569252 DDX54Q8TDD1 881 aaKnown RBP21.22■□□□□ 0.99
USB1-215ENST00000569252 MAPK8IP3Q9UPT6 1336 aa21.22■□□□□ 0.99
USB1-215ENST00000569252 RGPD2P0DJD1 1756 aa21.21■□□□□ 0.99
USB1-215ENST00000569252 PRKAR2BP31323 418 aa21.21■□□□□ 0.99
USB1-215ENST00000569252 ZCRB1Q8TBF4 217 aaKnown RBP21.21■□□□□ 0.99
USB1-215ENST00000569252 RSPH6AQ9H0K4 717 aa21.2■□□□□ 0.98
USB1-215ENST00000569252 CHD4Q14839 1912 aa21.19■□□□□ 0.98
USB1-215ENST00000569252 PELP1Q8IZL8 1130 aaKnown RBP21.19■□□□□ 0.98
USB1-215ENST00000569252 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.19■□□□□ 0.98
USB1-215ENST00000569252 KDRP35968 1356 aa21.19■□□□□ 0.98
USB1-215ENST00000569252 DOT1LQ8TEK3 1739 aa21.18■□□□□ 0.98
USB1-215ENST00000569252 AKT1S1Q96B36 256 aa21.18■□□□□ 0.98
USB1-215ENST00000569252 NLGN2Q8NFZ4 835 aa21.17■□□□□ 0.98
USB1-215ENST00000569252 SYTL4Q96C24 671 aaPredicted RBP21.17■□□□□ 0.98
USB1-215ENST00000569252 RUNDC1Q96C34 613 aa21.17■□□□□ 0.98
USB1-215ENST00000569252 PNPLA7Q6ZV29 1317 aa21.17■□□□□ 0.98
USB1-215ENST00000569252 SHANK3Q9BYB0 1731 aa21.16■□□□□ 0.98
USB1-215ENST00000569252 SENP3-EIF4A1A0A087X0R7 540 aa21.16■□□□□ 0.98
USB1-215ENST00000569252 C1orf141Q5JVX7 400 aa21.16■□□□□ 0.98
USB1-215ENST00000569252 GAS2L2Q8NHY3 880 aa21.16■□□□□ 0.98
USB1-215ENST00000569252 NCAPD2Q15021 1401 aa21.15■□□□□ 0.98
USB1-215ENST00000569252 CCDC146Q8IYE0 955 aa21.15■□□□□ 0.98
USB1-215ENST00000569252 PLEKHG2Q9H7P9 1386 aa21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms