RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 RAD21O60216 631 aa8.67□□□□□ -1.02
CAPN3-217ENST00000567817 UBTFP17480 764 aaKnown RBP8.67□□□□□ -1.02
CAPN3-217ENST00000567817 RAB15P59190 212 aa8.67□□□□□ -1.02
CAPN3-217ENST00000567817 SCARF1Q14162 830 aa8.67□□□□□ -1.02
CAPN3-217ENST00000567817 GAPVD1Q14C86 1478 aa8.67□□□□□ -1.02
CAPN3-217ENST00000567817 RNF20Q5VTR2 975 aa8.67□□□□□ -1.02
CAPN3-217ENST00000567817 ERVH48-1M5A8F1 160 aa8.66□□□□□ -1.02
CAPN3-217ENST00000567817 GIGYF1O75420 1035 aaPredicted RBP8.66□□□□□ -1.02
CAPN3-217ENST00000567817 Q6ZVU0 165 aa8.66□□□□□ -1.02
CAPN3-217ENST00000567817 WWC1Q8IX03 1113 aa8.66□□□□□ -1.02
CAPN3-217ENST00000567817 POLA1P09884 1462 aaPredicted RBP8.65□□□□□ -1.02
CAPN3-217ENST00000567817 UPP2O95045 317 aa8.65□□□□□ -1.02
CAPN3-217ENST00000567817 VAC14Q08AM6 782 aa8.65□□□□□ -1.02
CAPN3-217ENST00000567817 LINC00528Q8N1L1 170 aa8.65□□□□□ -1.02
CAPN3-217ENST00000567817 CHMP7Q8WUX9 453 aaPredicted RBP8.65□□□□□ -1.02
CAPN3-217ENST00000567817 POM121Q96HA1 1249 aa8.65□□□□□ -1.02
CAPN3-217ENST00000567817 SYNJ2O15056 1496 aa8.64□□□□□ -1.03
CAPN3-217ENST00000567817 SNAPC4Q5SXM2 1469 aa8.64□□□□□ -1.03
CAPN3-217ENST00000567817 SOX11P35716 441 aa8.64□□□□□ -1.03
CAPN3-217ENST00000567817 ZNF784Q8NCA9 323 aaPredicted RBP8.64□□□□□ -1.03
CAPN3-217ENST00000567817 ZFP42Q96MM3 310 aa8.64□□□□□ -1.03
CAPN3-217ENST00000567817 PURBQ96QR8 312 aaKnown RBP8.64□□□□□ -1.03
CAPN3-217ENST00000567817 TSEN34Q9BSV6 310 aaKnown RBP8.64□□□□□ -1.03
CAPN3-217ENST00000567817 TMPRSS4Q9NRS4 437 aa8.64□□□□□ -1.03
CAPN3-217ENST00000567817 CBLBQ13191 982 aa8.63□□□□□ -1.03
CAPN3-217ENST00000567817 CEP126Q9P2H0 1117 aa8.63□□□□□ -1.03
CAPN3-217ENST00000567817 GRIN2BQ13224 1484 aa8.62□□□□□ -1.03
CAPN3-217ENST00000567817 LILRA1O75019 489 aa8.61□□□□□ -1.03
CAPN3-217ENST00000567817 BMP2P12643 396 aa8.61□□□□□ -1.03
CAPN3-217ENST00000567817 SNRPBP14678 240 aaKnown RBP8.61□□□□□ -1.03
CAPN3-217ENST00000567817 C6orf118Q5T5N4 469 aa8.61□□□□□ -1.03
CAPN3-217ENST00000567817 ADH1AP07327 375 aa8.6□□□□□ -1.03
CAPN3-217ENST00000567817 ERVK-9P63128 1117 aa8.59□□□□□ -1.03
CAPN3-217ENST00000567817 SEMA3FQ13275 785 aa8.59□□□□□ -1.03
CAPN3-217ENST00000567817 CYLDQ9NQC7 956 aa8.59□□□□□ -1.03
CAPN3-217ENST00000567817 PCDHB11Q9Y5F2 797 aa8.59□□□□□ -1.03
CAPN3-217ENST00000567817 SOGA1O94964 1423 aa8.59□□□□□ -1.03
CAPN3-217ENST00000567817 SPINT1O43278 529 aa8.58□□□□□ -1.04
CAPN3-217ENST00000567817 SLFNL1Q499Z3 407 aa8.58□□□□□ -1.04
CAPN3-217ENST00000567817 CC2D2BQ6DHV5 1058 aa8.58□□□□□ -1.04
CAPN3-217ENST00000567817 TDRD9Q8NDG6 1382 aaKnown RBP8.58□□□□□ -1.04
CAPN3-217ENST00000567817 CCDC88BA6NC98 1476 aa8.57□□□□□ -1.04
CAPN3-217ENST00000567817 ADD1P35611 737 aaKnown RBP8.57□□□□□ -1.04
CAPN3-217ENST00000567817 RNF135Q8IUD6 432 aa8.57□□□□□ -1.04
CAPN3-217ENST00000567817 PHTF2Q8N3S3 785 aa8.57□□□□□ -1.04
CAPN3-217ENST00000567817 SOS2Q07890 1332 aaPredicted RBP8.56□□□□□ -1.04
CAPN3-217ENST00000567817 RELBQ01201 579 aa8.56□□□□□ -1.04
CAPN3-217ENST00000567817 AGBL1Q96MI9 1066 aa8.56□□□□□ -1.04
CAPN3-217ENST00000567817 CCDC85AQ96PX6 553 aaPredicted RBP8.56□□□□□ -1.04
CAPN3-217ENST00000567817 PROSER2Q86WR7 435 aaPredicted RBP8.55□□□□□ -1.04
CAPN3-217ENST00000567817 CLUAP1Q96AJ1 413 aa8.55□□□□□ -1.04
CAPN3-217ENST00000567817 ZNF775Q96BV0 537 aaPredicted RBP8.55□□□□□ -1.04
CAPN3-217ENST00000567817 CHIC2Q9UKJ5 165 aa8.55□□□□□ -1.04
CAPN3-217ENST00000567817 DOLKQ9UPQ8 538 aa8.55□□□□□ -1.04
CAPN3-217ENST00000567817 RAD54L2Q9Y4B4 1467 aa8.55□□□□□ -1.04
CAPN3-217ENST00000567817 KIF13AQ9H1H9 1805 aa8.54□□□□□ -1.04
CAPN3-217ENST00000567817 A6NJR5 290 aa8.54□□□□□ -1.04
CAPN3-217ENST00000567817 TTLL8A6PVC2 850 aa8.54□□□□□ -1.04
CAPN3-217ENST00000567817 ATP5J2-PTCD1G3V325 749 aa8.54□□□□□ -1.04
CAPN3-217ENST00000567817 PTGIRP43119 386 aa8.54□□□□□ -1.04
CAPN3-217ENST00000567817 SCTRP47872 440 aa8.54□□□□□ -1.04
CAPN3-217ENST00000567817 CYP2U1Q7Z449 544 aa8.54□□□□□ -1.04
CAPN3-217ENST00000567817 KDF1Q8NAX2 398 aaPredicted RBP8.54□□□□□ -1.04
CAPN3-217ENST00000567817 ALG2Q9H553 416 aa8.54□□□□□ -1.04
CAPN3-217ENST00000567817 TRAK2O60296 914 aa8.53□□□□□ -1.04
CAPN3-217ENST00000567817 MAN1A2O60476 641 aa8.53□□□□□ -1.04
CAPN3-217ENST00000567817 MYCP01106 439 aaPredicted RBP8.53□□□□□ -1.04
CAPN3-217ENST00000567817 FNBP4Q8N3X1 1017 aaPredicted RBP8.53□□□□□ -1.04
CAPN3-217ENST00000567817 ESF1Q9H501 851 aaKnown RBP8.53□□□□□ -1.04
CAPN3-217ENST00000567817 ERCC6L2Q5T890 1561 aa8.52□□□□□ -1.04
CAPN3-217ENST00000567817 ABCC10Q5T3U5 1492 aa8.52□□□□□ -1.05
CAPN3-217ENST00000567817 MAP7D1Q3KQU3 841 aa8.52□□□□□ -1.05
CAPN3-217ENST00000567817 CDCA7Q9BWT1 371 aaPredicted RBP8.52□□□□□ -1.05
CAPN3-217ENST00000567817 OSBPL3Q9H4L5 887 aa8.52□□□□□ -1.05
CAPN3-217ENST00000567817 ZNF395Q9H8N7 513 aaPredicted RBP8.52□□□□□ -1.05
CAPN3-217ENST00000567817 FGD5Q6ZNL6 1462 aa8.51□□□□□ -1.05
CAPN3-217ENST00000567817 POM121CA8CG34 1229 aa8.51□□□□□ -1.05
CAPN3-217ENST00000567817 PLPP7Q8NBV4 271 aa8.51□□□□□ -1.05
CAPN3-217ENST00000567817 SIRT1Q96EB6 747 aa8.51□□□□□ -1.05
CAPN3-217ENST00000567817 INSM2Q96T92 566 aaPredicted RBP8.51□□□□□ -1.05
CAPN3-217ENST00000567817 POLMQ9NP87 494 aaPredicted RBP8.51□□□□□ -1.05
CAPN3-217ENST00000567817 DNMT3LQ9UJW3 386 aa8.51□□□□□ -1.05
CAPN3-217ENST00000567817 MAPKBP1O60336 1514 aa8.5□□□□□ -1.05
CAPN3-217ENST00000567817 SOBPA7XYQ1 873 aa8.5□□□□□ -1.05
CAPN3-217ENST00000567817 CTSOP43234 321 aaPredicted RBP8.5□□□□□ -1.05
CAPN3-217ENST00000567817 USP4Q13107 963 aa8.5□□□□□ -1.05
CAPN3-217ENST00000567817 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.5□□□□□ -1.05
CAPN3-217ENST00000567817 CEP170Q5SW79 1584 aa8.5□□□□□ -1.05
CAPN3-217ENST00000567817 NPAS3Q8IXF0 933 aa8.5□□□□□ -1.05
CAPN3-217ENST00000567817 NFATC2IPQ8NCF5 419 aa8.5□□□□□ -1.05
CAPN3-217ENST00000567817 KDM6BO15054 1643 aa8.5□□□□□ -1.05
CAPN3-217ENST00000567817 PBRM1Q86U86 1689 aa8.49□□□□□ -1.05
CAPN3-217ENST00000567817 NUP160Q12769 1436 aa8.49□□□□□ -1.05
CAPN3-217ENST00000567817 TSGA10IPQ3SY00 556 aa8.49□□□□□ -1.05
CAPN3-217ENST00000567817 OXLD1Q5BKU9 147 aa8.49□□□□□ -1.05
CAPN3-217ENST00000567817 ADAMTS19Q8TE59 1207 aa8.49□□□□□ -1.05
CAPN3-217ENST00000567817 NXF1Q9UBU9 619 aaKnown RBP8.49□□□□□ -1.05
CAPN3-217ENST00000567817 SHROOM2Q13796 1616 aa8.49□□□□□ -1.05
CAPN3-217ENST00000567817 GRIN2AQ12879 1464 aa8.49□□□□□ -1.05
CAPN3-217ENST00000567817 PIK3CDO00329 1044 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms