RNA–Protein interactions for RNA: ENST00000566640.1

SIN3A-207, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 944 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-207ENST00000566640 LRP5O75197 1615 aa10.05□□□□□ -0.8
SIN3A-207ENST00000566640 MKRN3Q13064 507 aaKnown RBP10.05□□□□□ -0.8
SIN3A-207ENST00000566640 ABTB2Q8N961 1025 aa10.05□□□□□ -0.8
SIN3A-207ENST00000566640 STRN4Q9NRL3 753 aa10.05□□□□□ -0.8
SIN3A-207ENST00000566640 RYDENQ9NUL5 291 aaKnown RBP10.05□□□□□ -0.8
SIN3A-207ENST00000566640 PPIP5K1Q6PFW1 1433 aa10.05□□□□□ -0.8
SIN3A-207ENST00000566640 LMO7Q8WWI1 1683 aa10.04□□□□□ -0.8
SIN3A-207ENST00000566640 PSDA5PKW4 1024 aaPredicted RBP10.04□□□□□ -0.8
SIN3A-207ENST00000566640 GCP02774 474 aa10.04□□□□□ -0.8
SIN3A-207ENST00000566640 LARP1Q6PKG0 1096 aaKnown RBP10.04□□□□□ -0.8
SIN3A-207ENST00000566640 FAM196AQ6ZSG2 479 aa10.04□□□□□ -0.8
SIN3A-207ENST00000566640 CAMKK2Q96RR4 588 aa10.04□□□□□ -0.8
SIN3A-207ENST00000566640 SOX12O15370 315 aa10.03□□□□□ -0.8
SIN3A-207ENST00000566640 USP6P35125 1406 aa10.03□□□□□ -0.8
SIN3A-207ENST00000566640 SRPK2P78362 688 aaKnown RBP10.03□□□□□ -0.8
SIN3A-207ENST00000566640 EZH2Q15910 746 aaKnown RBP10.03□□□□□ -0.8
SIN3A-207ENST00000566640 NLRP13Q86W25 1043 aa10.03□□□□□ -0.8
SIN3A-207ENST00000566640 TCP11L2Q8N4U5 519 aa10.03□□□□□ -0.8
SIN3A-207ENST00000566640 L3MBTL2Q969R5 705 aa10.03□□□□□ -0.8
SIN3A-207ENST00000566640 PARD3Q8TEW0 1356 aa10.02□□□□□ -0.8
SIN3A-207ENST00000566640 TONSLQ96HA7 1378 aa10.02□□□□□ -0.8
SIN3A-207ENST00000566640 TRIM37O94972 964 aa10.02□□□□□ -0.81
SIN3A-207ENST00000566640 SLAIN1Q8ND83 568 aa10.02□□□□□ -0.81
SIN3A-207ENST00000566640 PCGF6Q9BYE7 350 aa10.02□□□□□ -0.81
SIN3A-207ENST00000566640 CABP1Q9NZU7 370 aa10.02□□□□□ -0.81
SIN3A-207ENST00000566640 USP35Q9P2H5 1018 aa10.02□□□□□ -0.81
SIN3A-207ENST00000566640 THRAP3Q9Y2W1 955 aaKnown RBP10.02□□□□□ -0.81
SIN3A-207ENST00000566640 COL5A2P05997 1499 aaPredicted RBP10.02□□□□□ -0.81
SIN3A-207ENST00000566640 TNS1Q9HBL0 1735 aaKnown RBP10.02□□□□□ -0.81
SIN3A-207ENST00000566640 AATKQ6ZMQ8 1374 aa10.01□□□□□ -0.81
SIN3A-207ENST00000566640 EVA1CP58658 441 aa10.01□□□□□ -0.81
SIN3A-207ENST00000566640 NLRP6P59044 892 aa10.01□□□□□ -0.81
SIN3A-207ENST00000566640 R3HDM1Q15032 1099 aaKnown RBP10.01□□□□□ -0.81
SIN3A-207ENST00000566640 FBXO22Q8NEZ5 403 aa10.01□□□□□ -0.81
SIN3A-207ENST00000566640 RGPD1P0DJD0 1748 aa10.01□□□□□ -0.81
SIN3A-207ENST00000566640 SLIT3O75094 1523 aa10.01□□□□□ -0.81
SIN3A-207ENST00000566640 ROCK2O75116 1388 aaKnown RBP10.01□□□□□ -0.81
SIN3A-207ENST00000566640 SEC24BO95487 1268 aa10□□□□□ -0.81
SIN3A-207ENST00000566640 CRB1P82279 1406 aa9.99□□□□□ -0.81
SIN3A-207ENST00000566640 APBA3O96018 575 aa9.99□□□□□ -0.81
SIN3A-207ENST00000566640 PDE3BQ13370 1112 aa9.99□□□□□ -0.81
SIN3A-207ENST00000566640 VSIG10Q8N0Z9 540 aa9.98□□□□□ -0.81
SIN3A-207ENST00000566640 EVC2Q86UK5 1308 aa9.98□□□□□ -0.81
SIN3A-207ENST00000566640 CPSF1Q10570 1443 aaKnown RBP9.98□□□□□ -0.81
SIN3A-207ENST00000566640 PPP1R37O75864 691 aa9.97□□□□□ -0.81
SIN3A-207ENST00000566640 IER5LQ5T953 404 aa9.97□□□□□ -0.81
SIN3A-207ENST00000566640 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.97□□□□□ -0.813e-8■■■□□ 18.6
SIN3A-207ENST00000566640 AXIN2Q9Y2T1 843 aa9.97□□□□□ -0.81
SIN3A-207ENST00000566640 C11orf95C9JLR9 678 aaPredicted RBP9.96□□□□□ -0.82
SIN3A-207ENST00000566640 ARHGEF25Q86VW2 580 aa9.96□□□□□ -0.82
SIN3A-207ENST00000566640 MS4A4AQ96JQ5 239 aa9.96□□□□□ -0.82
SIN3A-207ENST00000566640 TMEM121BQ9BXQ6 578 aaPredicted RBP9.96□□□□□ -0.82
SIN3A-207ENST00000566640 TTC21BQ7Z4L5 1316 aa9.96□□□□□ -0.82
SIN3A-207ENST00000566640 WDR17Q8IZU2 1322 aa9.96□□□□□ -0.82
SIN3A-207ENST00000566640 SBNO2Q9Y2G9 1366 aa9.96□□□□□ -0.82
SIN3A-207ENST00000566640 OVOS2A0A0G2JMS6 1433 aa9.96□□□□□ -0.82
SIN3A-207ENST00000566640 OVOS2A0A0J9YW53 1432 aa9.96□□□□□ -0.82
SIN3A-207ENST00000566640 OVOS2Q6IE36 1432 aa9.96□□□□□ -0.82
SIN3A-207ENST00000566640 PIK3C2AO00443 1686 aa9.96□□□□□ -0.82
SIN3A-207ENST00000566640 TTC21AQ8NDW8 1320 aa9.95□□□□□ -0.82
SIN3A-207ENST00000566640 BCL9O00512 1426 aa9.95□□□□□ -0.82
SIN3A-207ENST00000566640 PARP4Q9UKK3 1724 aaKnown RBP9.95□□□□□ -0.82
SIN3A-207ENST00000566640 PEAK1Q9H792 1746 aa9.94□□□□□ -0.82
SIN3A-207ENST00000566640 RREB1Q92766 1687 aa9.94□□□□□ -0.82
SIN3A-207ENST00000566640 KCNH5Q8NCM2 988 aa9.94□□□□□ -0.82
SIN3A-207ENST00000566640 LRRC37A3O60309 1634 aa9.93□□□□□ -0.82
SIN3A-207ENST00000566640 NFAT5O94916 1531 aa9.93□□□□□ -0.82
SIN3A-207ENST00000566640 PLSCR1O15162 318 aa9.93□□□□□ -0.82
SIN3A-207ENST00000566640 DDB1Q16531 1140 aa9.93□□□□□ -0.82
SIN3A-207ENST00000566640 TOM1L2Q6ZVM7 507 aa9.93□□□□□ -0.82
SIN3A-207ENST00000566640 COL18A1P39060 1754 aa9.93□□□□□ -0.82
SIN3A-207ENST00000566640 CD163L1Q9NR16 1453 aa9.92□□□□□ -0.82
SIN3A-207ENST00000566640 USP31Q70CQ4 1352 aa9.92□□□□□ -0.82
SIN3A-207ENST00000566640 ZBTB7CA1YPR0 619 aa9.92□□□□□ -0.82
SIN3A-207ENST00000566640 IRX5P78411 483 aaPredicted RBP9.92□□□□□ -0.82
SIN3A-207ENST00000566640 NBPF14Q5TI25 921 aa9.92□□□□□ -0.82
SIN3A-207ENST00000566640 PTF1AQ7RTS3 328 aa9.92□□□□□ -0.82
SIN3A-207ENST00000566640 MARCH10Q8NA82 808 aaPredicted RBP9.92□□□□□ -0.82
SIN3A-207ENST00000566640 CDCA7Q9BWT1 371 aaPredicted RBP9.92□□□□□ -0.82
SIN3A-207ENST00000566640 CARD10Q9BWT7 1032 aa9.92□□□□□ -0.82
SIN3A-207ENST00000566640 NUP188Q5SRE5 1749 aa9.92□□□□□ -0.82
SIN3A-207ENST00000566640 ABCC6O95255 1503 aa9.92□□□□□ -0.82
SIN3A-207ENST00000566640 KTN1Q86UP2 1357 aaKnown RBP9.91□□□□□ -0.82
SIN3A-207ENST00000566640 PDCD7Q8N8D1 485 aaKnown RBP9.91□□□□□ -0.82
SIN3A-207ENST00000566640 CARD11Q9BXL7 1154 aa9.91□□□□□ -0.82
SIN3A-207ENST00000566640 ANO8Q9HCE9 1232 aaPredicted RBP9.91□□□□□ -0.82
SIN3A-207ENST00000566640 PLCG2P16885 1265 aa9.9□□□□□ -0.82
SIN3A-207ENST00000566640 MARVELD3Q96A59 401 aa9.9□□□□□ -0.82
SIN3A-207ENST00000566640 OCEL1Q9H607 264 aa9.9□□□□□ -0.82
SIN3A-207ENST00000566640 CCDC7Q96M83 1385 aa9.89□□□□□ -0.83
SIN3A-207ENST00000566640 ERBB3P21860 1342 aa9.89□□□□□ -0.83
SIN3A-207ENST00000566640 AKAP12Q02952 1782 aa9.89□□□□□ -0.83
SIN3A-207ENST00000566640 CCER1Q8TC90 406 aaPredicted RBP9.89□□□□□ -0.83
SIN3A-207ENST00000566640 TNS2Q63HR2 1409 aa9.89□□□□□ -0.83
SIN3A-207ENST00000566640 RGPD3A6NKT7 1758 aaPredicted RBP9.88□□□□□ -0.83
SIN3A-207ENST00000566640 RGPD4Q7Z3J3 1758 aa9.88□□□□□ -0.83
SIN3A-207ENST00000566640 KCNQ2O43526 872 aa9.88□□□□□ -0.83
SIN3A-207ENST00000566640 CSB-PGBD3P0DP91 1061 aa9.88□□□□□ -0.83
SIN3A-207ENST00000566640 NME9Q86XW9 330 aa9.88□□□□□ -0.83
SIN3A-207ENST00000566640 SPON1Q9HCB6 807 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms