RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 TATP17735 454 aaPredicted RBP16.66■□□□□ 0.26
KARS-204ENST00000564578 PARP4Q9UKK3 1724 aaKnown RBP16.66■□□□□ 0.26
KARS-204ENST00000564578 EXOC5O00471 708 aa16.66■□□□□ 0.26
KARS-204ENST00000564578 DDB1Q16531 1140 aa16.66■□□□□ 0.26
KARS-204ENST00000564578 ILDR2Q71H61 639 aa16.66■□□□□ 0.26
KARS-204ENST00000564578 PNISRQ8TF01 805 aaKnown RBP16.66■□□□□ 0.26
KARS-204ENST00000564578 FCHSD2O94868 740 aa16.65■□□□□ 0.26
KARS-204ENST00000564578 ADAMTS8Q9UP79 889 aa16.65■□□□□ 0.26
KARS-204ENST00000564578 LRRC37A3O60309 1634 aa16.65■□□□□ 0.26
KARS-204ENST00000564578 ZCRB1Q8TBF4 217 aaKnown RBP16.64■□□□□ 0.26
KARS-204ENST00000564578 TNS2Q63HR2 1409 aa16.64■□□□□ 0.25
KARS-204ENST00000564578 BRWD3Q6RI45 1802 aa16.64■□□□□ 0.25
KARS-204ENST00000564578 PHACTR3Q96KR7 559 aa16.64■□□□□ 0.25
KARS-204ENST00000564578 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.64■□□□□ 0.252e-7■■■□□ 18.1
KARS-204ENST00000564578 PRKAR2BP31323 418 aa16.63■□□□□ 0.25
KARS-204ENST00000564578 FAM182BQ5T319 152 aa16.63■□□□□ 0.25
KARS-204ENST00000564578 KRT27Q7Z3Y8 459 aa16.63■□□□□ 0.25
KARS-204ENST00000564578 MARCH10Q8NA82 808 aaPredicted RBP16.63■□□□□ 0.25
KARS-204ENST00000564578 PLEKHF1Q96S99 279 aa16.63■□□□□ 0.25
KARS-204ENST00000564578 PLEKHG2Q9H7P9 1386 aa16.63■□□□□ 0.25
KARS-204ENST00000564578 CCER2I3L3R5 266 aa16.62■□□□□ 0.25
KARS-204ENST00000564578 CYP27B1O15528 508 aa16.62■□□□□ 0.25
KARS-204ENST00000564578 PDE3BQ13370 1112 aa16.62■□□□□ 0.25
KARS-204ENST00000564578 WDR43Q15061 677 aaKnown RBP eCLIP16.61■□□□□ 0.25
KARS-204ENST00000564578 DDX54Q8TDD1 881 aaKnown RBP16.61■□□□□ 0.25
KARS-204ENST00000564578 PKD1L3Q7Z443 1732 aa16.61■□□□□ 0.25
KARS-204ENST00000564578 SHANK3Q9BYB0 1731 aa16.61■□□□□ 0.25
KARS-204ENST00000564578 MTHFSDQ2M296 383 aaKnown RBP16.6■□□□□ 0.25
KARS-204ENST00000564578 AMOTQ4VCS5 1084 aa16.6■□□□□ 0.25
KARS-204ENST00000564578 PLEKHO1Q53GL0 409 aaPredicted RBP16.6■□□□□ 0.25
KARS-204ENST00000564578 SPG7Q9UQ90 795 aa16.6■□□□□ 0.25
KARS-204ENST00000564578 PCDH11XQ9BZA7 1347 aa16.58■□□□□ 0.25
KARS-204ENST00000564578 PCDH11YQ9BZA8 1340 aa16.58■□□□□ 0.25
KARS-204ENST00000564578 PHKG2P15735 406 aa16.57■□□□□ 0.24
KARS-204ENST00000564578 ZNF530Q6P9A1 599 aaPredicted RBP16.57■□□□□ 0.24
KARS-204ENST00000564578 CCDC146Q8IYE0 955 aa16.57■□□□□ 0.24
KARS-204ENST00000564578 NKX1-1Q15270 411 aaPredicted RBP16.56■□□□□ 0.24
KARS-204ENST00000564578 IFNL2Q8IZJ0 200 aa16.56■□□□□ 0.24
KARS-204ENST00000564578 BCL9O00512 1426 aa16.55■□□□□ 0.24
KARS-204ENST00000564578 FAM9BQ8IZU0 186 aa16.55■□□□□ 0.24
KARS-204ENST00000564578 PNNQ9H307 717 aaKnown RBP16.55■□□□□ 0.24
KARS-204ENST00000564578 FAM196AQ6ZSG2 479 aa16.54■□□□□ 0.24
KARS-204ENST00000564578 RUNDC1Q96C34 613 aa16.54■□□□□ 0.24
KARS-204ENST00000564578 AKAP4Q5JQC9 854 aa16.53■□□□□ 0.24
KARS-204ENST00000564578 GAS2L2Q8NHY3 880 aa16.53■□□□□ 0.24
KARS-204ENST00000564578 PTF1AQ7RTS3 328 aa16.53■□□□□ 0.24
KARS-204ENST00000564578 C1orf141Q5JVX7 400 aa16.52■□□□□ 0.23
KARS-204ENST00000564578 MAPK8IP3Q9UPT6 1336 aa16.51■□□□□ 0.23
KARS-204ENST00000564578 KCNQ2O43526 872 aa16.51■□□□□ 0.23
KARS-204ENST00000564578 MPRIPQ6WCQ1 1025 aa16.51■□□□□ 0.23
KARS-204ENST00000564578 KDM6AO15550 1401 aaPredicted RBP16.51■□□□□ 0.23
KARS-204ENST00000564578 TMPOP42166 694 aaKnown RBP16.51■□□□□ 0.23
KARS-204ENST00000564578 NFE2L2Q16236 605 aa16.51■□□□□ 0.23
KARS-204ENST00000564578 DCAF5Q96JK2 942 aa16.51■□□□□ 0.23
KARS-204ENST00000564578 LGR6Q9HBX8 967 aa16.51■□□□□ 0.23
KARS-204ENST00000564578 GNAT3A8MTJ3 354 aa16.5■□□□□ 0.23
KARS-204ENST00000564578 APAF1O14727 1248 aa16.5■□□□□ 0.23
KARS-204ENST00000564578 NEFMP07197 916 aa16.5■□□□□ 0.23
KARS-204ENST00000564578 ACSBG1Q96GR2 724 aa16.5■□□□□ 0.23
KARS-204ENST00000564578 MAP3K5Q99683 1374 aa16.5■□□□□ 0.23
KARS-204ENST00000564578 IL17REQ8NFR9 667 aa16.49■□□□□ 0.23
KARS-204ENST00000564578 RRP7AQ9Y3A4 280 aaKnown RBP16.49■□□□□ 0.23
KARS-204ENST00000564578 TRIM37O94972 964 aa16.49■□□□□ 0.23
KARS-204ENST00000564578 HSP90AB1P08238 724 aaKnown RBP16.49■□□□□ 0.23
KARS-204ENST00000564578 PRIM1P49642 420 aaKnown RBP16.49■□□□□ 0.23
KARS-204ENST00000564578 SENP3-EIF4A1A0A087X0R7 540 aa16.48■□□□□ 0.23
KARS-204ENST00000564578 TOGARAM1Q9Y4F4 1720 aa16.48■□□□□ 0.23
KARS-204ENST00000564578 SBF2Q86WG5 1849 aa16.47■□□□□ 0.23
KARS-204ENST00000564578 RNMTO43148 476 aaKnown RBP16.47■□□□□ 0.23
KARS-204ENST00000564578 RIPK4P57078 832 aa16.47■□□□□ 0.23
KARS-204ENST00000564578 KAT6BQ8WYB5 2073 aa16.47■□□□□ 0.23
KARS-204ENST00000564578 ADAMTS7Q9UKP4 1686 aa16.47■□□□□ 0.23
KARS-204ENST00000564578 CEMIPQ8WUJ3 1361 aa16.47■□□□□ 0.23
KARS-204ENST00000564578 DCTN1Q14203 1278 aa16.47■□□□□ 0.23
KARS-204ENST00000564578 NEUROD2Q15784 382 aa16.47■□□□□ 0.23
KARS-204ENST00000564578 MCM10Q7L590 875 aa16.47■□□□□ 0.23
KARS-204ENST00000564578 ERVV-2B6SEH9 535 aa16.46■□□□□ 0.23
KARS-204ENST00000564578 BCL11BQ9C0K0 894 aaPredicted RBP16.46■□□□□ 0.23
KARS-204ENST00000564578 TRIM35Q9UPQ4 493 aa16.46■□□□□ 0.23
KARS-204ENST00000564578 DOT1LQ8TEK3 1739 aa16.45■□□□□ 0.22
KARS-204ENST00000564578 HTATSF1O43719 755 aaKnown RBP16.45■□□□□ 0.22
KARS-204ENST00000564578 SYTL4Q96C24 671 aaPredicted RBP16.45■□□□□ 0.22
KARS-204ENST00000564578 DLG5Q8TDM6 1919 aa16.45■□□□□ 0.22
KARS-204ENST00000564578 PIGBQ92521 554 aa16.45■□□□□ 0.22
KARS-204ENST00000564578 UPF1Q92900 1129 aaKnown RBP eCLIP16.45■□□□□ 0.22
KARS-204ENST00000564578 NFATC2IPQ8NCF5 419 aa16.44■□□□□ 0.22
KARS-204ENST00000564578 THUMPD2Q9BTF0 503 aaKnown RBP16.44■□□□□ 0.22
KARS-204ENST00000564578 SCN11AQ9UI33 1791 aa16.44■□□□□ 0.22
KARS-204ENST00000564578 RTF1Q92541 710 aaKnown RBP16.43■□□□□ 0.22
KARS-204ENST00000564578 SLC52A2Q9HAB3 445 aa16.43■□□□□ 0.22
KARS-204ENST00000564578 NHSQ6T4R5 1651 aa16.43■□□□□ 0.22
KARS-204ENST00000564578 MRC1P22897 1456 aa16.42■□□□□ 0.22
KARS-204ENST00000564578 CABP4P57796 275 aa16.42■□□□□ 0.22
KARS-204ENST00000564578 ITGB4P16144 1822 aa16.42■□□□□ 0.22
KARS-204ENST00000564578 TMOD3Q9NYL9 352 aa16.41■□□□□ 0.22
KARS-204ENST00000564578 CCDC125Q86Z20 511 aa16.4■□□□□ 0.22
KARS-204ENST00000564578 ASAP1Q9ULH1 1129 aa16.4■□□□□ 0.22
KARS-204ENST00000564578 VIRMAQ69YN4 1812 aaKnown RBP16.4■□□□□ 0.22
KARS-204ENST00000564578 TNS1Q9HBL0 1735 aaKnown RBP16.4■□□□□ 0.22
KARS-204ENST00000564578 APBA3O96018 575 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms