RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 ADD1P35611 737 aaKnown RBP9.8□□□□□ -0.84
USP8-216ENST00000561206 SNRPNP63162 240 aaKnown RBP9.8□□□□□ -0.84
USP8-216ENST00000561206 OCSTAMPQ9BR26 566 aa9.8□□□□□ -0.84
USP8-216ENST00000561206 H7C1W4 665 aa9.79□□□□□ -0.84
USP8-216ENST00000561206 RTL5Q5HYW3 569 aaPredicted RBP9.79□□□□□ -0.84
USP8-216ENST00000561206 ZBTB33Q86T24 672 aa9.79□□□□□ -0.84
USP8-216ENST00000561206 TMPRSS4Q9NRS4 437 aa9.79□□□□□ -0.84
USP8-216ENST00000561206 FKBPLQ9UIM3 349 aa9.79□□□□□ -0.84
USP8-216ENST00000561206 NSFL1CQ9UNZ2 370 aaKnown RBP9.79□□□□□ -0.84
USP8-216ENST00000561206 DYRK1BQ9Y463 629 aa9.79□□□□□ -0.84
USP8-216ENST00000561206 GPSM3Q9Y4H4 160 aa9.79□□□□□ -0.84
USP8-216ENST00000561206 NBPF20Q3BBV1 942 aa9.78□□□□□ -0.84
USP8-216ENST00000561206 MKL2Q9ULH7 1088 aa9.78□□□□□ -0.84
USP8-216ENST00000561206 KDM2AQ9Y2K7 1162 aa9.78□□□□□ -0.84
USP8-216ENST00000561206 MX2P20592 715 aa9.77□□□□□ -0.85
USP8-216ENST00000561206 GPC1P35052 558 aa9.77□□□□□ -0.85
USP8-216ENST00000561206 PRICKLE2Q7Z3G6 844 aa9.77□□□□□ -0.85
USP8-216ENST00000561206 GTPBP3Q969Y2 492 aaKnown RBP9.77□□□□□ -0.85
USP8-216ENST00000561206 TRERF1Q96PN7 1200 aa9.77□□□□□ -0.85
USP8-216ENST00000561206 KRTAP4-12Q9BQ66 201 aa9.76□□□□□ -0.85
USP8-216ENST00000561206 RHOQP17081 205 aa9.75□□□□□ -0.85
USP8-216ENST00000561206 LCE3BQ5TA77 95 aa9.75□□□□□ -0.85
USP8-216ENST00000561206 ESPNB1AK53 854 aa9.74□□□□□ -0.85
USP8-216ENST00000561206 ITGB7P26010 798 aa9.74□□□□□ -0.85
USP8-216ENST00000561206 MAP2K3P46734 347 aa9.74□□□□□ -0.85
USP8-216ENST00000561206 OXCT2Q9BYC2 517 aaPredicted RBP9.74□□□□□ -0.85
USP8-216ENST00000561206 ERVH48-1M5A8F1 160 aa9.73□□□□□ -0.85
USP8-216ENST00000561206 PTK2Q05397 1052 aa9.73□□□□□ -0.85
USP8-216ENST00000561206 SHISA8B8ZZ34 492 aa9.72□□□□□ -0.85
USP8-216ENST00000561206 CTDSPL2Q05D32 466 aa9.72□□□□□ -0.85
USP8-216ENST00000561206 RIPOR1Q6ZS17 1223 aa9.72□□□□□ -0.85
USP8-216ENST00000561206 ADAM32Q8TC27 787 aa9.72□□□□□ -0.85
USP8-216ENST00000561206 HOXB4P17483 251 aaPredicted RBP9.71□□□□□ -0.86
USP8-216ENST00000561206 WDR44Q5JSH3 913 aa9.71□□□□□ -0.86
USP8-216ENST00000561206 PPP2R2DQ66LE6 453 aa9.7□□□□□ -0.86
USP8-216ENST00000561206 TRIM52Q96A61 297 aa9.7□□□□□ -0.86
USP8-216ENST00000561206 TRIM66O15016 1216 aa9.69□□□□□ -0.86
USP8-216ENST00000561206 LINC00114Q6XXX2 140 aa9.69□□□□□ -0.86
USP8-216ENST00000561206 C1orf229Q6ZS94 237 aaPredicted RBP9.69□□□□□ -0.86
USP8-216ENST00000561206 SEPT12Q8IYM1 358 aa9.69□□□□□ -0.86
USP8-216ENST00000561206 CFHR5Q9BXR6 569 aa9.69□□□□□ -0.86
USP8-216ENST00000561206 GDF2Q9UK05 429 aaPredicted RBP9.68□□□□□ -0.86
USP8-216ENST00000561206 C1QTNF9BB2RNN3 333 aa9.66□□□□□ -0.86
USP8-216ENST00000561206 SPATA31C2B4DYI2 1134 aa9.66□□□□□ -0.86
USP8-216ENST00000561206 CLK2P49760 499 aaKnown RBP9.66□□□□□ -0.86
USP8-216ENST00000561206 CD163Q86VB7 1156 aa9.66□□□□□ -0.86
USP8-216ENST00000561206 LRRN4Q8WUT4 740 aa9.66□□□□□ -0.86
USP8-216ENST00000561206 ZC3H15Q8WU90 426 aaKnown RBP9.65□□□□□ -0.86
USP8-216ENST00000561206 KLRG1Q96E93 195 aa9.65□□□□□ -0.86
USP8-216ENST00000561206 GAS2L1Q99501 681 aaPredicted RBP9.65□□□□□ -0.86
USP8-216ENST00000561206 GRIP2Q9C0E4 1043 aa9.65□□□□□ -0.86
USP8-216ENST00000561206 NUCKS1Q9H1E3 243 aaKnown RBP9.65□□□□□ -0.86
USP8-216ENST00000561206 ATP5J2-PTCD1G3V325 749 aa9.64□□□□□ -0.87
USP8-216ENST00000561206 PIK3R2O00459 728 aa9.64□□□□□ -0.87
USP8-216ENST00000561206 NR6A1Q15406 480 aa9.64□□□□□ -0.87
USP8-216ENST00000561206 NBPF10Q6P3W6 841 aaKnown RBP9.64□□□□□ -0.87
USP8-216ENST00000561206 NBPF15Q8N660 670 aa9.64□□□□□ -0.87
USP8-216ENST00000561206 EDARADDQ8WWZ3 215 aa9.64□□□□□ -0.87
USP8-216ENST00000561206 SUV39H2Q9H5I1 410 aa9.64□□□□□ -0.87
USP8-216ENST00000561206 THBS1P07996 1170 aa9.63□□□□□ -0.87
USP8-216ENST00000561206 POU4F2Q12837 409 aa9.63□□□□□ -0.87
USP8-216ENST00000561206 CYLDQ9NQC7 956 aa9.63□□□□□ -0.87
USP8-216ENST00000561206 A0A1W2PRU2 124 aa9.62□□□□□ -0.87
USP8-216ENST00000561206 F11P03951 625 aa9.62□□□□□ -0.87
USP8-216ENST00000561206 RAB15P59190 212 aa9.62□□□□□ -0.87
USP8-216ENST00000561206 GRIN2CQ14957 1233 aa9.62□□□□□ -0.87
USP8-216ENST00000561206 GOLGA6L1Q8N7Z2 621 aa9.62□□□□□ -0.87
USP8-216ENST00000561206 BTBD11A6QL63 1104 aa9.61□□□□□ -0.87
USP8-216ENST00000561206 GNB5O14775 395 aa9.61□□□□□ -0.87
USP8-216ENST00000561206 ZMYM1Q5SVZ6 1142 aa9.61□□□□□ -0.87
USP8-216ENST00000561206 DZIP3Q86Y13 1208 aaKnown RBP9.61□□□□□ -0.87
USP8-216ENST00000561206 RRAGCQ9HB90 399 aa9.61□□□□□ -0.87
USP8-216ENST00000561206 CHRNA4P43681 627 aa9.6□□□□□ -0.87
USP8-216ENST00000561206 MEN1O00255 615 aa9.59□□□□□ -0.87
USP8-216ENST00000561206 SLCO4C1Q6ZQN7 724 aa9.59□□□□□ -0.87
USP8-216ENST00000561206 PHF24Q9UPV7 400 aa9.59□□□□□ -0.87
USP8-216ENST00000561206 CLN3Q13286 438 aa9.58□□□□□ -0.88
USP8-216ENST00000561206 UBAP2LQ14157 1087 aaKnown RBP9.58□□□□□ -0.88
USP8-216ENST00000561206 CCDC125Q86Z20 511 aa9.58□□□□□ -0.88
USP8-216ENST00000561206 AK7Q96M32 723 aa9.58□□□□□ -0.88
USP8-216ENST00000561206 KRTAP9-9Q9BYP9 154 aa9.58□□□□□ -0.88
USP8-216ENST00000561206 KRTAP9-4Q9BYQ2 154 aa9.58□□□□□ -0.88
USP8-216ENST00000561206 RSPH6AQ9H0K4 717 aa9.58□□□□□ -0.88
USP8-216ENST00000561206 SEMA6BQ9H3T3 888 aa9.58□□□□□ -0.88
USP8-216ENST00000561206 SLC27A3Q5K4L6 730 aa9.57□□□□□ -0.88
USP8-216ENST00000561206 TIMMDC1Q9NPL8 285 aa9.57□□□□□ -0.88
USP8-216ENST00000561206 ERVK-9P63128 1117 aa9.56□□□□□ -0.88
USP8-216ENST00000561206 LBRQ14739 615 aaKnown RBP9.56□□□□□ -0.88
USP8-216ENST00000561206 NOP53Q9NZM5 478 aaKnown RBP9.56□□□□□ -0.88
USP8-216ENST00000561206 WASLO00401 505 aaPredicted RBP9.55□□□□□ -0.88
USP8-216ENST00000561206 DGKGP49619 791 aa9.55□□□□□ -0.88
USP8-216ENST00000561206 HAP1P54257 671 aaPredicted RBP9.55□□□□□ -0.88
USP8-216ENST00000561206 TAS1R3Q7RTX0 852 aa9.55□□□□□ -0.88
USP8-216ENST00000561206 PNMA1Q8ND90 353 aa9.54□□□□□ -0.88
USP8-216ENST00000561206 NLRP3Q96P20 1036 aa9.54□□□□□ -0.88
USP8-216ENST00000561206 EPXP11678 715 aa9.53□□□□□ -0.88
USP8-216ENST00000561206 BTBD6Q96KE9 485 aa9.53□□□□□ -0.88
USP8-216ENST00000561206 DOC2BQ14184 412 aa9.52□□□□□ -0.89
USP8-216ENST00000561206 FOXD4L6Q3SYB3 417 aaPredicted RBP9.52□□□□□ -0.89
USP8-216ENST00000561206 FOXD4L3Q6VB84 417 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms