RNA–Protein interactions for RNA: ENST00000560631.1

RNF31-222, Transcript of ring finger protein 31, human

TSL 2

Gene RNF31, Length 320 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-222	ENST00000560631	TOM1L2	Q6ZVM7	507 aa		10.97	□□□□□ -0.65
RNF31-222	ENST00000560631	MORC1	Q86VD1	984 aa		10.97	□□□□□ -0.65
RNF31-222	ENST00000560631	SEPT12	Q8IYM1	358 aa		10.97	□□□□□ -0.65
RNF31-222	ENST00000560631	ANKRD24	Q8TF21	1146 aa		10.97	□□□□□ -0.65
RNF31-222	ENST00000560631	WNK3	Q9BYP7	1800 aa		10.97	□□□□□ -0.65
RNF31-222	ENST00000560631	RGPD2	P0DJD1	1756 aa		10.96	□□□□□ -0.65
RNF31-222	ENST00000560631	PARP4	Q9UKK3	1724 aa	Known RBP	10.96	□□□□□ -0.65
RNF31-222	ENST00000560631	SMG6	Q86US8	1419 aa	Known RBP	10.96	□□□□□ -0.65
RNF31-222	ENST00000560631	FAM98C	Q17RN3	349 aa	Known RBP	10.96	□□□□□ -0.65
RNF31-222	ENST00000560631	CDCA7	Q9BWT1	371 aa	Predicted RBP	10.96	□□□□□ -0.65
RNF31-222	ENST00000560631	EMILIN1	Q9Y6C2	1016 aa		10.96	□□□□□ -0.65
RNF31-222	ENST00000560631	DISP2	A7MBM2	1401 aa		10.95	□□□□□ -0.66
RNF31-222	ENST00000560631	CSB-PGBD3	P0DP91	1061 aa		10.95	□□□□□ -0.66
RNF31-222	ENST00000560631	SPDYE4	A6NLX3	237 aa		10.94	□□□□□ -0.66
RNF31-222	ENST00000560631	HSP90AB2P	Q58FF8	381 aa		10.94	□□□□□ -0.66
RNF31-222	ENST00000560631	DCBLD2	Q96PD2	775 aa		10.94	□□□□□ -0.66
RNF31-222	ENST00000560631	CREBZF	Q9NS37	354 aa		10.94	□□□□□ -0.66
RNF31-222	ENST00000560631	NCAPD2	Q15021	1401 aa		10.93	□□□□□ -0.66
RNF31-222	ENST00000560631	KAT6B	Q8WYB5	2073 aa		10.93	□□□□□ -0.66
RNF31-222	ENST00000560631	NLRP2	Q9NX02	1062 aa		10.93	□□□□□ -0.66
RNF31-222	ENST00000560631	USP35	Q9P2H5	1018 aa		10.93	□□□□□ -0.66
RNF31-222	ENST00000560631	TNNT2	P45379	298 aa	Predicted RBP	10.92	□□□□□ -0.66
RNF31-222	ENST00000560631	CC2D1B	Q5T0F9	858 aa	Known RBP	10.92	□□□□□ -0.66
RNF31-222	ENST00000560631	KRT27	Q7Z3Y8	459 aa		10.92	□□□□□ -0.66
RNF31-222	ENST00000560631	EP400	Q96L91	3159 aa		10.91	□□□□□ -0.66
RNF31-222	ENST00000560631	ZNF316	A6NFI3	1004 aa	Predicted RBP	10.91	□□□□□ -0.66
RNF31-222	ENST00000560631	DDX10	Q13206	875 aa	Known RBP	10.91	□□□□□ -0.66
RNF31-222	ENST00000560631	NBPF6	Q5VWK0	638 aa		10.91	□□□□□ -0.66
RNF31-222	ENST00000560631	LTV1	Q96GA3	475 aa	Predicted RBP	10.91	□□□□□ -0.66
RNF31-222	ENST00000560631	NBPF4	Q96M43	638 aa		10.91	□□□□□ -0.66
RNF31-222	ENST00000560631	PPM1G	O15355	546 aa	Predicted RBP	10.9	□□□□□ -0.66
RNF31-222	ENST00000560631	IL2RB	P14784	551 aa		10.9	□□□□□ -0.66
RNF31-222	ENST00000560631	MTHFS	P49914	203 aa		10.9	□□□□□ -0.66
RNF31-222	ENST00000560631	EIF4A2	Q14240	407 aa	Known RBP	10.9	□□□□□ -0.66
RNF31-222	ENST00000560631	UPF1	Q92900	1129 aa	Known RBP eCLIP	10.9	□□□□□ -0.66
RNF31-222	ENST00000560631	LRRC37A3	O60309	1634 aa		10.9	□□□□□ -0.66
RNF31-222	ENST00000560631	BCL9	O00512	1426 aa		10.9	□□□□□ -0.66
RNF31-222	ENST00000560631	PLEKHG2	Q9H7P9	1386 aa		10.9	□□□□□ -0.67
RNF31-222	ENST00000560631	SBF2	Q86WG5	1849 aa		10.89	□□□□□ -0.67
RNF31-222	ENST00000560631		A0A0G2JS52	829 aa		10.89	□□□□□ -0.67
RNF31-222	ENST00000560631	EXOC5	O00471	708 aa		10.89	□□□□□ -0.67
RNF31-222	ENST00000560631	MYT1	Q01538	1121 aa		10.89	□□□□□ -0.67
RNF31-222	ENST00000560631	DDB1	Q16531	1140 aa		10.89	□□□□□ -0.67
RNF31-222	ENST00000560631	CCDC125	Q86Z20	511 aa		10.89	□□□□□ -0.67
RNF31-222	ENST00000560631	EYA1	Q99502	592 aa		10.89	□□□□□ -0.67
RNF31-222	ENST00000560631	PARD3	Q8TEW0	1356 aa		10.89	□□□□□ -0.67
RNF31-222	ENST00000560631	PDE3B	Q13370	1112 aa		10.88	□□□□□ -0.67
RNF31-222	ENST00000560631	TNS2	Q63HR2	1409 aa		10.88	□□□□□ -0.67
RNF31-222	ENST00000560631	IGSF1	Q8N6C5	1336 aa		10.87	□□□□□ -0.67
RNF31-222	ENST00000560631	RGPD1	P0DJD0	1748 aa		10.87	□□□□□ -0.67
RNF31-222	ENST00000560631	IL13	P35225	146 aa		10.87	□□□□□ -0.67
RNF31-222	ENST00000560631	FAM196A	Q6ZSG2	479 aa		10.87	□□□□□ -0.67
RNF31-222	ENST00000560631	OVOS2	A0A0G2JMS6	1433 aa		10.86	□□□□□ -0.67
RNF31-222	ENST00000560631	PPP2R1A	P30153	589 aa		10.86	□□□□□ -0.67
RNF31-222	ENST00000560631	RALBP1	Q15311	655 aa		10.86	□□□□□ -0.67
RNF31-222	ENST00000560631	ZNF579	Q8NAF0	562 aa	Known RBP	10.86	□□□□□ -0.67
RNF31-222	ENST00000560631	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	10.86	□□□□□ -0.67
RNF31-222	ENST00000560631	SHANK3	Q9BYB0	1731 aa		10.86	□□□□□ -0.67
RNF31-222	ENST00000560631	MEGF6	O75095	1541 aa		10.85	□□□□□ -0.67
RNF31-222	ENST00000560631	PKD1L3	Q7Z443	1732 aa		10.85	□□□□□ -0.67
RNF31-222	ENST00000560631	TAT	P17735	454 aa	Predicted RBP	10.85	□□□□□ -0.67
RNF31-222	ENST00000560631	MARCH10	Q8NA82	808 aa	Predicted RBP	10.85	□□□□□ -0.67
RNF31-222	ENST00000560631	ZCRB1	Q8TBF4	217 aa	Known RBP	10.85	□□□□□ -0.67
RNF31-222	ENST00000560631	RAPGEF4	Q8WZA2	1011 aa		10.85	□□□□□ -0.67
RNF31-222	ENST00000560631	COL3A1	P02461	1466 aa	Predicted RBP	10.85	□□□□□ -0.67
RNF31-222	ENST00000560631	DIAPH1	O60610	1272 aa	Known RBP	10.84	□□□□□ -0.67
RNF31-222	ENST00000560631	USHBP1	Q8N6Y0	703 aa		10.84	□□□□□ -0.67
RNF31-222	ENST00000560631	KDR	P35968	1356 aa		10.84	□□□□□ -0.67
RNF31-222	ENST00000560631	FAM182B	Q5T319	152 aa		10.83	□□□□□ -0.68
RNF31-222	ENST00000560631	TNS1	Q9HBL0	1735 aa	Known RBP	10.82	□□□□□ -0.68
RNF31-222	ENST00000560631	CFAP53	Q96M91	514 aa		10.82	□□□□□ -0.68
RNF31-222	ENST00000560631	CNGB1	Q14028	1251 aa	Predicted RBP	10.81	□□□□□ -0.68
RNF31-222	ENST00000560631	PRKRIP1	Q9H875	184 aa	Predicted RBP	10.81	□□□□□ -0.68
RNF31-222	ENST00000560631	PLSCR2	Q9NRY7	297 aa		10.81	□□□□□ -0.68
RNF31-222	ENST00000560631	SF3B2	Q13435	895 aa	Known RBP	10.8	□□□□□ -0.68
RNF31-222	ENST00000560631	NKX1-1	Q15270	411 aa	Predicted RBP	10.8	□□□□□ -0.68
RNF31-222	ENST00000560631	SULT6B1	Q6IMI4	303 aa		10.8	□□□□□ -0.68
RNF31-222	ENST00000560631	BCL11B	Q9C0K0	894 aa	Predicted RBP	10.8	□□□□□ -0.68
RNF31-222	ENST00000560631	SPG7	Q9UQ90	795 aa		10.8	□□□□□ -0.68
RNF31-222	ENST00000560631	NUDC	Q9Y266	331 aa		10.8	□□□□□ -0.68
RNF31-222	ENST00000560631	MYBBP1A	Q9BQG0	1328 aa	Known RBP	10.8	□□□□□ -0.68
RNF31-222	ENST00000560631	PCDH11X	Q9BZA7	1347 aa		10.8	□□□□□ -0.68
RNF31-222	ENST00000560631	PCDH11Y	Q9BZA8	1340 aa		10.8	□□□□□ -0.68
RNF31-222	ENST00000560631	NHS	Q6T4R5	1651 aa		10.79	□□□□□ -0.68
RNF31-222	ENST00000560631	CYP27B1	O15528	508 aa		10.79	□□□□□ -0.68
RNF31-222	ENST00000560631	TRIM37	O94972	964 aa		10.79	□□□□□ -0.68
RNF31-222	ENST00000560631	AMOT	Q4VCS5	1084 aa		10.79	□□□□□ -0.68
RNF31-222	ENST00000560631	PLEKHO1	Q53GL0	409 aa	Predicted RBP	10.79	□□□□□ -0.68
RNF31-222	ENST00000560631	DDX54	Q8TDD1	881 aa	Known RBP	10.79	□□□□□ -0.68
RNF31-222	ENST00000560631	RGPD3	A6NKT7	1758 aa	Predicted RBP	10.78	□□□□□ -0.68
RNF31-222	ENST00000560631	RGPD4	Q7Z3J3	1758 aa		10.78	□□□□□ -0.68
RNF31-222	ENST00000560631	PLSCR1	O15162	318 aa		10.78	□□□□□ -0.68
RNF31-222	ENST00000560631	BAG6	P46379	1132 aa		10.78	□□□□□ -0.68
RNF31-222	ENST00000560631	AEBP1	Q8IUX7	1158 aa		10.78	□□□□□ -0.68
RNF31-222	ENST00000560631	IFNL2	Q8IZJ0	200 aa		10.78	□□□□□ -0.68
RNF31-222	ENST00000560631	ITGB4	P16144	1822 aa		10.78	□□□□□ -0.68
RNF31-222	ENST00000560631	VIRMA	Q69YN4	1812 aa	Known RBP	10.77	□□□□□ -0.68
RNF31-222	ENST00000560631	MNX1	P50219	401 aa	Predicted RBP	10.77	□□□□□ -0.69
RNF31-222	ENST00000560631	BTAF1	O14981	1849 aa		10.77	□□□□□ -0.69
RNF31-222	ENST00000560631	FCHSD2	O94868	740 aa		10.76	□□□□□ -0.69

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