RNA–Protein interactions for RNA: ENST00000559598.6

CRNDE-207, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-207ENST00000559598 BAP1Q92560 729 aa10.08□□□□□ -0.8
CRNDE-207ENST00000559598 HMX1Q9NP08 348 aaPredicted RBP10.08□□□□□ -0.8
CRNDE-207ENST00000559598 NUP153P49790 1475 aaKnown RBP10.08□□□□□ -0.8
CRNDE-207ENST00000559598 IQSEC2Q5JU85 1478 aa10.08□□□□□ -0.8
CRNDE-207ENST00000559598 SKOR1P84550 965 aa10.07□□□□□ -0.8
CRNDE-207ENST00000559598 NR6A1Q15406 480 aa10.07□□□□□ -0.8
CRNDE-207ENST00000559598 ZNF775Q96BV0 537 aaPredicted RBP10.07□□□□□ -0.8
CRNDE-207ENST00000559598 HECW1Q76N89 1606 aa10.07□□□□□ -0.8
CRNDE-207ENST00000559598 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.07□□□□□ -0.8
CRNDE-207ENST00000559598 ARID3CA6NKF2 412 aa10.06□□□□□ -0.8
CRNDE-207ENST00000559598 ST8SIA5O15466 376 aa10.06□□□□□ -0.8
CRNDE-207ENST00000559598 SH3BP2P78314 561 aa10.06□□□□□ -0.8
CRNDE-207ENST00000559598 ZNF511Q8NB15 262 aa10.06□□□□□ -0.8
CRNDE-207ENST00000559598 ARMC2Q8NEN0 867 aa10.06□□□□□ -0.8
CRNDE-207ENST00000559598 LINC01559Q495D7 138 aa10.05□□□□□ -0.8
CRNDE-207ENST00000559598 SNIP1Q8TAD8 396 aaKnown RBP10.05□□□□□ -0.8
CRNDE-207ENST00000559598 C9orf84Q5VXU9 1444 aa10.05□□□□□ -0.8
CRNDE-207ENST00000559598 UHRF1BP1Q6BDS2 1440 aa10.05□□□□□ -0.8
CRNDE-207ENST00000559598 AXIN1O15169 862 aa10.04□□□□□ -0.8
CRNDE-207ENST00000559598 SMCPP49901 116 aaPredicted RBP10.04□□□□□ -0.8
CRNDE-207ENST00000559598 EPS8L1Q8TE68 723 aa10.04□□□□□ -0.8
CRNDE-207ENST00000559598 SNRKQ9NRH2 765 aa10.04□□□□□ -0.8
CRNDE-207ENST00000559598 PTPRTO14522 1441 aa10.04□□□□□ -0.8
CRNDE-207ENST00000559598 ATP10AO60312 1499 aa10.04□□□□□ -0.8
CRNDE-207ENST00000559598 PLEKHD1A6NEE1 506 aa10.03□□□□□ -0.8
CRNDE-207ENST00000559598 RC3H1Q5TC82 1133 aaKnown RBP10.03□□□□□ -0.8
CRNDE-207ENST00000559598 NBPF14Q5TI25 921 aa10.03□□□□□ -0.8
CRNDE-207ENST00000559598 MTMR14Q8NCE2 650 aa10.03□□□□□ -0.8
CRNDE-207ENST00000559598 TRIM34Q9BYJ4 488 aa10.03□□□□□ -0.8
CRNDE-207ENST00000559598 FKBPLQ9UIM3 349 aa10.03□□□□□ -0.8
CRNDE-207ENST00000559598 MYO5CQ9NQX4 1742 aa10.02□□□□□ -0.8
CRNDE-207ENST00000559598 POTECB2RU33 542 aa10.02□□□□□ -0.81
CRNDE-207ENST00000559598 GJD4Q96KN9 370 aaPredicted RBP10.02□□□□□ -0.81
CRNDE-207ENST00000559598 REREQ9P2R6 1566 aa10.01□□□□□ -0.81
CRNDE-207ENST00000559598 GPKOWQ92917 476 aaPredicted RBP eCLIP10.01□□□□□ -0.815e-7■□□□□ 9.3
CRNDE-207ENST00000559598 MRGPRX2Q96LB1 330 aa10.01□□□□□ -0.81
CRNDE-207ENST00000559598 PNMA1Q8ND90 353 aa10□□□□□ -0.81
CRNDE-207ENST00000559598 ZC3H4Q9UPT8 1303 aaKnown RBP10□□□□□ -0.81
CRNDE-207ENST00000559598 SCAPERQ9BY12 1400 aa9.99□□□□□ -0.81
CRNDE-207ENST00000559598 ZNF518AQ6AHZ1 1483 aa9.99□□□□□ -0.81
CRNDE-207ENST00000559598 APBB1O00213 710 aa9.99□□□□□ -0.81
CRNDE-207ENST00000559598 MLECQ14165 292 aa9.99□□□□□ -0.81
CRNDE-207ENST00000559598 EHBP1Q8NDI1 1231 aa9.99□□□□□ -0.81
CRNDE-207ENST00000559598 FOXJ1Q92949 421 aa9.99□□□□□ -0.81
CRNDE-207ENST00000559598 KDM5CP41229 1560 aa9.99□□□□□ -0.81
CRNDE-207ENST00000559598 LTBP4Q8N2S1 1624 aa9.99□□□□□ -0.81
CRNDE-207ENST00000559598 C3P01024 1663 aa9.99□□□□□ -0.81
CRNDE-207ENST00000559598 PLCH2O75038 1416 aa9.99□□□□□ -0.81
CRNDE-207ENST00000559598 SMPD1P17405 629 aa9.98□□□□□ -0.81
CRNDE-207ENST00000559598 AGERQ15109 404 aa9.98□□□□□ -0.81
CRNDE-207ENST00000559598 BPHLQ86WA6 291 aaPredicted RBP9.98□□□□□ -0.81
CRNDE-207ENST00000559598 VARSP26640 1264 aaKnown RBP9.97□□□□□ -0.81
CRNDE-207ENST00000559598 PDXDC2PQ6P474 469 aa9.97□□□□□ -0.81
CRNDE-207ENST00000559598 SH3BP5LQ7L8J4 393 aa9.97□□□□□ -0.81
CRNDE-207ENST00000559598 MCM6Q14566 821 aa9.96□□□□□ -0.82
CRNDE-207ENST00000559598 C4orf48Q5BLP8 95 aa9.96□□□□□ -0.82
CRNDE-207ENST00000559598 SH3RF1Q7Z6J0 888 aa9.96□□□□□ -0.82
CRNDE-207ENST00000559598 NDUFB9Q9Y6M9 179 aa9.96□□□□□ -0.82
CRNDE-207ENST00000559598 AGLP35573 1532 aa9.96□□□□□ -0.82
CRNDE-207ENST00000559598 DIP2CQ9Y2E4 1556 aa9.96□□□□□ -0.82
CRNDE-207ENST00000559598 SIAH2O43255 324 aa9.95□□□□□ -0.82
CRNDE-207ENST00000559598 MROH2AA6NES4 1674 aa9.94□□□□□ -0.82
CRNDE-207ENST00000559598 KIF14Q15058 1648 aa9.94□□□□□ -0.82
CRNDE-207ENST00000559598 NCOA1Q15788 1441 aa9.94□□□□□ -0.82
CRNDE-207ENST00000559598 CNTLNQ9NXG0 1405 aa9.94□□□□□ -0.82
CRNDE-207ENST00000559598 C11orf95C9JLR9 678 aaPredicted RBP9.94□□□□□ -0.82
CRNDE-207ENST00000559598 J3QL48 77 aa9.94□□□□□ -0.82
CRNDE-207ENST00000559598 GMPR2Q9P2T1 348 aaKnown RBP9.94□□□□□ -0.82
CRNDE-207ENST00000559598 DACH1Q9UI36 760 aa9.94□□□□□ -0.82
CRNDE-207ENST00000559598 GPSM3Q9Y4H4 160 aa9.94□□□□□ -0.82
CRNDE-207ENST00000559598 CDK13Q14004 1512 aaKnown RBP9.93□□□□□ -0.82
CRNDE-207ENST00000559598 TRAPPC8Q9Y2L5 1435 aa9.93□□□□□ -0.82
CRNDE-207ENST00000559598 MAGEB6P1A0A0J9YX57 407 aa9.93□□□□□ -0.82
CRNDE-207ENST00000559598 PTK2Q05397 1052 aa9.93□□□□□ -0.82
CRNDE-207ENST00000559598 EFCAB2Q5VUJ9 269 aa9.93□□□□□ -0.82
CRNDE-207ENST00000559598 FAM174AQ8TBP5 190 aa9.93□□□□□ -0.82
CRNDE-207ENST00000559598 ARHGAP9Q9BRR9 750 aa9.93□□□□□ -0.82
CRNDE-207ENST00000559598 ABCA6Q8N139 1617 aa9.93□□□□□ -0.82
CRNDE-207ENST00000559598 EEA1Q15075 1411 aa9.92□□□□□ -0.82
CRNDE-207ENST00000559598 CEBPAP49715 358 aaPredicted RBP9.92□□□□□ -0.82
CRNDE-207ENST00000559598 FLIIQ13045 1269 aa9.92□□□□□ -0.82
CRNDE-207ENST00000559598 C1QTNF2Q9BXJ5 285 aa9.92□□□□□ -0.82
CRNDE-207ENST00000559598 PRM3Q9NNZ6 103 aa9.92□□□□□ -0.82
CRNDE-207ENST00000559598 MLH3Q9UHC1 1453 aa9.91□□□□□ -0.82
CRNDE-207ENST00000559598 SUPT6HQ7KZ85 1726 aaKnown RBP9.91□□□□□ -0.82
CRNDE-207ENST00000559598 ZNF142P52746 1687 aaPredicted RBP9.91□□□□□ -0.82
CRNDE-207ENST00000559598 GPR37L1O60883 481 aa9.91□□□□□ -0.82
CRNDE-207ENST00000559598 OCSTAMPQ9BR26 566 aa9.91□□□□□ -0.82
CRNDE-207ENST00000559598 CARD14Q9BXL6 1004 aa9.91□□□□□ -0.82
CRNDE-207ENST00000559598 SENP2Q9HC62 589 aa9.91□□□□□ -0.82
CRNDE-207ENST00000559598 TLL2Q9Y6L7 1015 aa9.91□□□□□ -0.82
CRNDE-207ENST00000559598 ARHGAP5Q13017 1502 aa9.91□□□□□ -0.82
CRNDE-207ENST00000559598 NPATQ14207 1427 aa9.9□□□□□ -0.82
CRNDE-207ENST00000559598 CAMSAP1Q5T5Y3 1602 aa9.9□□□□□ -0.82
CRNDE-207ENST00000559598 ALDH1A1P00352 501 aa9.9□□□□□ -0.82
CRNDE-207ENST00000559598 TREML4Q6UXN2 200 aa9.9□□□□□ -0.82
CRNDE-207ENST00000559598 ZBTB33Q86T24 672 aa9.9□□□□□ -0.82
CRNDE-207ENST00000559598 MPNDQ8N594 471 aa9.9□□□□□ -0.82
CRNDE-207ENST00000559598 ESF1Q9H501 851 aaKnown RBP9.9□□□□□ -0.82
CRNDE-207ENST00000559598 ATP13A2Q9NQ11 1180 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms