RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 KDF1Q8NAX2 398 aaPredicted RBP7.38□□□□□ -1.23
CASC4-210ENST00000559550 ZNF837Q96EG3 531 aaPredicted RBP7.38□□□□□ -1.23
CASC4-210ENST00000559550 KCTD15Q96SI1 283 aaPredicted RBP7.38□□□□□ -1.23
CASC4-210ENST00000559550 CARD14Q9BXL6 1004 aa7.38□□□□□ -1.23
CASC4-210ENST00000559550 ZNF395Q9H8N7 513 aaPredicted RBP7.38□□□□□ -1.23
CASC4-210ENST00000559550 ATP1B4Q9UN42 357 aaPredicted RBP7.38□□□□□ -1.23
CASC4-210ENST00000559550 NUTM2BA6NNL0 878 aaPredicted RBP7.37□□□□□ -1.23
CASC4-210ENST00000559550 NUTM2EB1AL46 878 aaPredicted RBP7.37□□□□□ -1.23
CASC4-210ENST00000559550 INTS6LQ5JSJ4 861 aaKnown RBP7.37□□□□□ -1.23
CASC4-210ENST00000559550 NUTM2DQ5VT03 806 aaPredicted RBP7.37□□□□□ -1.23
CASC4-210ENST00000559550 PODNQ7Z5L7 613 aa7.37□□□□□ -1.23
CASC4-210ENST00000559550 NUTM2AQ8IVF1 878 aaPredicted RBP7.37□□□□□ -1.23
CASC4-210ENST00000559550 GPKOWQ92917 476 aaPredicted RBP eCLIP7.37□□□□□ -1.23
CASC4-210ENST00000559550 FURINP09958 794 aa7.36□□□□□ -1.23
CASC4-210ENST00000559550 DHX9Q08211 1270 aaKnown RBP7.36□□□□□ -1.23
CASC4-210ENST00000559550 NEDD1Q8NHV4 660 aa7.36□□□□□ -1.23
CASC4-210ENST00000559550 LRRC4BQ9NT99 713 aa7.36□□□□□ -1.23
CASC4-210ENST00000559550 GPR25O00155 361 aa7.35□□□□□ -1.23
CASC4-210ENST00000559550 TMEM132AQ24JP5 1023 aa7.35□□□□□ -1.23
CASC4-210ENST00000559550 PPP2R2DQ66LE6 453 aa7.35□□□□□ -1.23
CASC4-210ENST00000559550 TRIM22Q8IYM9 498 aa7.34□□□□□ -1.23
CASC4-210ENST00000559550 GMCL1Q96IK5 515 aa7.34□□□□□ -1.23
CASC4-210ENST00000559550 CDV3Q9UKY7 258 aaKnown RBP7.34□□□□□ -1.23
CASC4-210ENST00000559550 ITGB7P26010 798 aa7.33□□□□□ -1.24
CASC4-210ENST00000559550 ADD1P35611 737 aaKnown RBP7.33□□□□□ -1.24
CASC4-210ENST00000559550 RFC5P40937 340 aa7.33□□□□□ -1.24
CASC4-210ENST00000559550 SNRPNP63162 240 aaKnown RBP7.33□□□□□ -1.24
CASC4-210ENST00000559550 DBN1Q16643 649 aa7.33□□□□□ -1.24
CASC4-210ENST00000559550 PDXDC2PQ6P474 469 aa7.33□□□□□ -1.24
CASC4-210ENST00000559550 LYSMD3Q7Z3D4 306 aa7.33□□□□□ -1.24
CASC4-210ENST00000559550 TSC1Q92574 1164 aa7.33□□□□□ -1.24
CASC4-210ENST00000559550 LILRA1O75019 489 aa7.32□□□□□ -1.24
CASC4-210ENST00000559550 ADH1AP07327 375 aa7.32□□□□□ -1.24
CASC4-210ENST00000559550 COL8A1P27658 744 aa7.32□□□□□ -1.24
CASC4-210ENST00000559550 OCSTAMPQ9BR26 566 aa7.32□□□□□ -1.24
CASC4-210ENST00000559550 TMPRSS4Q9NRS4 437 aa7.32□□□□□ -1.24
CASC4-210ENST00000559550 OIP5O43482 229 aa7.31□□□□□ -1.24
CASC4-210ENST00000559550 PTGIRP43119 386 aa7.31□□□□□ -1.24
CASC4-210ENST00000559550 CTDSPL2Q05D32 466 aa7.31□□□□□ -1.24
CASC4-210ENST00000559550 SLC10A4Q96EP9 437 aa7.31□□□□□ -1.24
CASC4-210ENST00000559550 ZNF784Q8NCA9 323 aaPredicted RBP7.3□□□□□ -1.24
CASC4-210ENST00000559550 ARHGAP9Q9BRR9 750 aa7.3□□□□□ -1.24
CASC4-210ENST00000559550 AP1G2O75843 785 aa7.29□□□□□ -1.24
CASC4-210ENST00000559550 RHOQP17081 205 aa7.29□□□□□ -1.24
CASC4-210ENST00000559550 RNF144AP50876 292 aaPredicted RBP7.29□□□□□ -1.24
CASC4-210ENST00000559550 KRTAP19-1Q8IUB9 90 aa7.29□□□□□ -1.24
CASC4-210ENST00000559550 PRICKLE2Q7Z3G6 844 aa7.28□□□□□ -1.24
CASC4-210ENST00000559550 ALYREFQ86V81 257 aaKnown RBP7.28□□□□□ -1.24
CASC4-210ENST00000559550 HELBQ8NG08 1087 aaPredicted RBP7.28□□□□□ -1.24
CASC4-210ENST00000559550 LRRN4Q8WUT4 740 aa7.28□□□□□ -1.24
CASC4-210ENST00000559550 SHISA8B8ZZ34 492 aa7.27□□□□□ -1.25
CASC4-210ENST00000559550 C1orf229Q6ZS94 237 aaPredicted RBP7.27□□□□□ -1.25
CASC4-210ENST00000559550 GTPBP3Q969Y2 492 aaKnown RBP7.27□□□□□ -1.25
CASC4-210ENST00000559550 USP17L8P0C7I0 530 aa7.26□□□□□ -1.25
CASC4-210ENST00000559550 TMEM259Q4ZIN3 620 aa7.26□□□□□ -1.25
CASC4-210ENST00000559550 FOXR1Q6PIV2 292 aa7.26□□□□□ -1.25
CASC4-210ENST00000559550 FKBPLQ9UIM3 349 aa7.26□□□□□ -1.25
CASC4-210ENST00000559550 ERVH48-1M5A8F1 160 aa7.25□□□□□ -1.25
CASC4-210ENST00000559550 HOXB4P17483 251 aaPredicted RBP7.25□□□□□ -1.25
CASC4-210ENST00000559550 HMX1Q9NP08 348 aaPredicted RBP7.25□□□□□ -1.25
CASC4-210ENST00000559550 MX2P20592 715 aa7.24□□□□□ -1.25
CASC4-210ENST00000559550 ZBTB33Q86T24 672 aa7.24□□□□□ -1.25
CASC4-210ENST00000559550 SNRKQ9NRH2 765 aa7.24□□□□□ -1.25
CASC4-210ENST00000559550 MKL2Q9ULH7 1088 aa7.24□□□□□ -1.25
CASC4-210ENST00000559550 DYRK1BQ9Y463 629 aa7.24□□□□□ -1.25
CASC4-210ENST00000559550 RIPOR1Q6ZS17 1223 aa7.23□□□□□ -1.25
CASC4-210ENST00000559550 EPS8L1Q8TE68 723 aa7.23□□□□□ -1.25
CASC4-210ENST00000559550 OXCT2Q9BYC2 517 aaPredicted RBP7.23□□□□□ -1.25
CASC4-210ENST00000559550 SUV39H2Q9H5I1 410 aa7.23□□□□□ -1.25
CASC4-210ENST00000559550 H7C1W4 665 aa7.22□□□□□ -1.25
CASC4-210ENST00000559550 THBS1P07996 1170 aa7.22□□□□□ -1.25
CASC4-210ENST00000559550 LCE1DQ5T752 114 aa7.22□□□□□ -1.25
CASC4-210ENST00000559550 LINC00114Q6XXX2 140 aa7.22□□□□□ -1.25
CASC4-210ENST00000559550 MTMR14Q8NCE2 650 aa7.22□□□□□ -1.25
CASC4-210ENST00000559550 BANK1Q8NDB2 785 aa7.22□□□□□ -1.25
CASC4-210ENST00000559550 ADAM32Q8TC27 787 aa7.22□□□□□ -1.25
CASC4-210ENST00000559550 TRERF1Q96PN7 1200 aa7.22□□□□□ -1.25
CASC4-210ENST00000559550 ZC3H4Q9UPT8 1303 aaKnown RBP7.22□□□□□ -1.25
CASC4-210ENST00000559550 ESPNB1AK53 854 aa7.21□□□□□ -1.26
CASC4-210ENST00000559550 C1QTNF9BB2RNN3 333 aa7.21□□□□□ -1.26
CASC4-210ENST00000559550 GPC1P35052 558 aa7.21□□□□□ -1.26
CASC4-210ENST00000559550 NR6A1Q15406 480 aa7.21□□□□□ -1.26
CASC4-210ENST00000559550 TRIM34Q9BYJ4 488 aa7.21□□□□□ -1.26
CASC4-210ENST00000559550 MAP2K3P46734 347 aa7.2□□□□□ -1.26
CASC4-210ENST00000559550 NBPF20Q3BBV1 942 aa7.2□□□□□ -1.26
CASC4-210ENST00000559550 CD163Q86VB7 1156 aa7.2□□□□□ -1.26
CASC4-210ENST00000559550 GJD4Q96KN9 370 aaPredicted RBP7.2□□□□□ -1.26
CASC4-210ENST00000559550 NSFL1CQ9UNZ2 370 aaKnown RBP7.2□□□□□ -1.26
CASC4-210ENST00000559550 GPSM3Q9Y4H4 160 aa7.2□□□□□ -1.26
CASC4-210ENST00000559550 RAB15P59190 212 aa7.19□□□□□ -1.26
CASC4-210ENST00000559550 KLRG1Q96E93 195 aa7.19□□□□□ -1.26
CASC4-210ENST00000559550 CHRNA4P43681 627 aa7.18□□□□□ -1.26
CASC4-210ENST00000559550 PTK2Q05397 1052 aa7.18□□□□□ -1.26
CASC4-210ENST00000559550 POU4F2Q12837 409 aa7.18□□□□□ -1.26
CASC4-210ENST00000559550 MCM6Q14566 821 aa7.18□□□□□ -1.26
CASC4-210ENST00000559550 GRIN2CQ14957 1233 aa7.18□□□□□ -1.26
CASC4-210ENST00000559550 GAS2L1Q99501 681 aaPredicted RBP7.18□□□□□ -1.26
CASC4-210ENST00000559550 EDARADDQ8WWZ3 215 aa7.17□□□□□ -1.26
CASC4-210ENST00000559550 CFHR5Q9BXR6 569 aa7.17□□□□□ -1.26
CASC4-210ENST00000559550 CYLDQ9NQC7 956 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms