RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 FBXO31Q5XUX0 539 aaPredicted RBP6.43□□□□□ -1.38
LRRC28-212ENST00000558911 PROCA1Q8NCQ7 364 aaPredicted RBP6.43□□□□□ -1.38
LRRC28-212ENST00000558911 ENAMQ9NRM1 1142 aa6.43□□□□□ -1.38
LRRC28-212ENST00000558911 MEN1O00255 615 aa6.42□□□□□ -1.38
LRRC28-212ENST00000558911 GAS2L1Q99501 681 aaPredicted RBP6.42□□□□□ -1.38
LRRC28-212ENST00000558911 LILRA1O75019 489 aa6.41□□□□□ -1.38
LRRC28-212ENST00000558911 ZC3H4Q9UPT8 1303 aaKnown RBP6.41□□□□□ -1.38
LRRC28-212ENST00000558911 MSTNO14793 375 aa6.4□□□□□ -1.38
LRRC28-212ENST00000558911 PLA2G4EQ3MJ16 856 aa6.4□□□□□ -1.38
LRRC28-212ENST00000558911 FOXR1Q6PIV2 292 aa6.4□□□□□ -1.38
LRRC28-212ENST00000558911 PODNQ7Z5L7 613 aa6.4□□□□□ -1.38
LRRC28-212ENST00000558911 KDF1Q8NAX2 398 aaPredicted RBP6.4□□□□□ -1.38
LRRC28-212ENST00000558911 ZNF837Q96EG3 531 aaPredicted RBP6.4□□□□□ -1.38
LRRC28-212ENST00000558911 HMX1Q9NP08 348 aaPredicted RBP6.4□□□□□ -1.38
LRRC28-212ENST00000558911 MBIPQ9NS73 344 aa6.4□□□□□ -1.38
LRRC28-212ENST00000558911 IGF1RP08069 1367 aa6.4□□□□□ -1.39
LRRC28-212ENST00000558911 PHF20L1A8MW92 1017 aa6.39□□□□□ -1.39
LRRC28-212ENST00000558911 DBN1Q16643 649 aa6.39□□□□□ -1.39
LRRC28-212ENST00000558911 GALNT6Q8NCL4 622 aa6.39□□□□□ -1.39
LRRC28-212ENST00000558911 PNMA1Q8ND90 353 aa6.39□□□□□ -1.39
LRRC28-212ENST00000558911 GTPBP3Q969Y2 492 aaKnown RBP6.39□□□□□ -1.39
LRRC28-212ENST00000558911 DCAF5Q96JK2 942 aa6.39□□□□□ -1.39
LRRC28-212ENST00000558911 ARXQ96QS3 562 aa6.39□□□□□ -1.39
LRRC28-212ENST00000558911 ATP5J2-PTCD1G3V325 749 aa6.38□□□□□ -1.39
LRRC28-212ENST00000558911 POU4F2Q12837 409 aa6.38□□□□□ -1.39
LRRC28-212ENST00000558911 SKIV2LQ15477 1246 aaKnown RBP6.38□□□□□ -1.39
LRRC28-212ENST00000558911 SLC27A3Q5K4L6 730 aa6.38□□□□□ -1.39
LRRC28-212ENST00000558911 BEND7Q8N7W2 519 aaPredicted RBP6.38□□□□□ -1.39
LRRC28-212ENST00000558911 GPSM3Q9Y4H4 160 aa6.38□□□□□ -1.39
LRRC28-212ENST00000558911 BCRP11274 1271 aa6.37□□□□□ -1.39
LRRC28-212ENST00000558911 TRIM22Q8IYM9 498 aa6.37□□□□□ -1.39
LRRC28-212ENST00000558911 SPOCK3Q9BQ16 436 aa6.37□□□□□ -1.39
LRRC28-212ENST00000558911 USP17L8P0C7I0 530 aa6.36□□□□□ -1.39
LRRC28-212ENST00000558911 RNF144AP50876 292 aaPredicted RBP6.36□□□□□ -1.39
LRRC28-212ENST00000558911 ACDQ96AP0 544 aa6.36□□□□□ -1.39
LRRC28-212ENST00000558911 TRERF1Q96PN7 1200 aa6.36□□□□□ -1.39
LRRC28-212ENST00000558911 PCDHB9Q9Y5E1 797 aa6.36□□□□□ -1.39
LRRC28-212ENST00000558911 A0A1W2PRU2 124 aa6.35□□□□□ -1.39
LRRC28-212ENST00000558911 ADAM23O75077 832 aa6.35□□□□□ -1.39
LRRC28-212ENST00000558911 GIGYF1O75420 1035 aaPredicted RBP6.35□□□□□ -1.39
LRRC28-212ENST00000558911 MX2P20592 715 aa6.35□□□□□ -1.39
LRRC28-212ENST00000558911 XP32Q5T750 250 aa6.35□□□□□ -1.39
LRRC28-212ENST00000558911 NLRP3Q96P20 1036 aa6.35□□□□□ -1.39
LRRC28-212ENST00000558911 GPBP1L1Q9HC44 474 aaPredicted RBP6.35□□□□□ -1.39
LRRC28-212ENST00000558911 ESPNB1AK53 854 aa6.34□□□□□ -1.39
LRRC28-212ENST00000558911 H7C1W4 665 aa6.34□□□□□ -1.39
LRRC28-212ENST00000558911 SH3D19Q5HYK7 790 aa6.34□□□□□ -1.39
LRRC28-212ENST00000558911 PPP2R2DQ66LE6 453 aa6.34□□□□□ -1.39
LRRC28-212ENST00000558911 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.34□□□□□ -1.39
LRRC28-212ENST00000558911 FAM117AQ9C073 453 aa6.34□□□□□ -1.39
LRRC28-212ENST00000558911 ITGB2P05107 769 aa6.33□□□□□ -1.4
LRRC28-212ENST00000558911 RRAGCQ9HB90 399 aa6.33□□□□□ -1.4
LRRC28-212ENST00000558911 GTF3C3Q9Y5Q9 886 aa6.33□□□□□ -1.4
LRRC28-212ENST00000558911 GMCL1Q96IK5 515 aa6.32□□□□□ -1.4
LRRC28-212ENST00000558911 KDM4CQ9H3R0 1056 aa6.32□□□□□ -1.4
LRRC28-212ENST00000558911 DYRK1BQ9Y463 629 aa6.32□□□□□ -1.4
LRRC28-212ENST00000558911 SEPT12Q8IYM1 358 aa6.31□□□□□ -1.4
LRRC28-212ENST00000558911 TRIM52Q96A61 297 aa6.31□□□□□ -1.4
LRRC28-212ENST00000558911 NUCKS1Q9H1E3 243 aaKnown RBP6.31□□□□□ -1.4
LRRC28-212ENST00000558911 ESF1Q9H501 851 aaKnown RBP6.31□□□□□ -1.4
LRRC28-212ENST00000558911 GPAMQ9HCL2 828 aa6.31□□□□□ -1.4
LRRC28-212ENST00000558911 TIMMDC1Q9NPL8 285 aa6.31□□□□□ -1.4
LRRC28-212ENST00000558911 NSFL1CQ9UNZ2 370 aaKnown RBP6.31□□□□□ -1.4
LRRC28-212ENST00000558911 PROCP04070 461 aa6.3□□□□□ -1.4
LRRC28-212ENST00000558911 RFC5P40937 340 aa6.3□□□□□ -1.4
LRRC28-212ENST00000558911 PHKA2P46019 1235 aa6.3□□□□□ -1.4
LRRC28-212ENST00000558911 SNRPNP63162 240 aaKnown RBP6.3□□□□□ -1.4
LRRC28-212ENST00000558911 CC2D2BQ6DHV5 1058 aa6.3□□□□□ -1.4
LRRC28-212ENST00000558911 NBPF10Q6P3W6 841 aaKnown RBP6.3□□□□□ -1.4
LRRC28-212ENST00000558911 NBPF15Q8N660 670 aa6.3□□□□□ -1.4
LRRC28-212ENST00000558911 DDRGK1Q96HY6 314 aa6.3□□□□□ -1.4
LRRC28-212ENST00000558911 ARHGEF10LQ9HCE6 1279 aa6.3□□□□□ -1.4
LRRC28-212ENST00000558911 RAB6BQ9NRW1 208 aa6.3□□□□□ -1.4
LRRC28-212ENST00000558911 K7ELQ4 463 aaPredicted RBP6.29□□□□□ -1.4
LRRC28-212ENST00000558911 GPC1P35052 558 aa6.29□□□□□ -1.4
LRRC28-212ENST00000558911 OXCT2Q9BYC2 517 aaPredicted RBP6.29□□□□□ -1.4
LRRC28-212ENST00000558911 ZBBXA8MT70 800 aa6.28□□□□□ -1.4
LRRC28-212ENST00000558911 OIP5O43482 229 aa6.28□□□□□ -1.4
LRRC28-212ENST00000558911 FURINP09958 794 aa6.28□□□□□ -1.4
LRRC28-212ENST00000558911 FBXO45P0C2W1 286 aa6.28□□□□□ -1.4
LRRC28-212ENST00000558911 SCTRP47872 440 aa6.28□□□□□ -1.4
LRRC28-212ENST00000558911 TAS1R3Q7RTX0 852 aa6.28□□□□□ -1.4
LRRC28-212ENST00000558911 TRIM34Q9BYJ4 488 aa6.28□□□□□ -1.4
LRRC28-212ENST00000558911 PCDHB11Q9Y5F2 797 aa6.28□□□□□ -1.4
LRRC28-212ENST00000558911 KRBA1A5PL33 1030 aa6.27□□□□□ -1.41
LRRC28-212ENST00000558911 SHISA8B8ZZ34 492 aa6.27□□□□□ -1.41
LRRC28-212ENST00000558911 WASLO00401 505 aaPredicted RBP6.27□□□□□ -1.41
LRRC28-212ENST00000558911 F11P03951 625 aa6.27□□□□□ -1.41
LRRC28-212ENST00000558911 AMPD1P23109 780 aa6.27□□□□□ -1.41
LRRC28-212ENST00000558911 BAG6P46379 1132 aa6.27□□□□□ -1.41
LRRC28-212ENST00000558911 ERVK-9P63128 1117 aa6.27□□□□□ -1.41
LRRC28-212ENST00000558911 GRIN2CQ14957 1233 aa6.27□□□□□ -1.41
LRRC28-212ENST00000558911 CYP2U1Q7Z449 544 aa6.27□□□□□ -1.41
LRRC28-212ENST00000558911 GRIP2Q9C0E4 1043 aa6.27□□□□□ -1.41
LRRC28-212ENST00000558911 CLN3Q13286 438 aa6.26□□□□□ -1.41
LRRC28-212ENST00000558911 RNF20Q5VTR2 975 aa6.26□□□□□ -1.41
LRRC28-212ENST00000558911 MKL2Q9ULH7 1088 aa6.26□□□□□ -1.41
LRRC28-212ENST00000558911 MAP2K3P46734 347 aa6.25□□□□□ -1.41
LRRC28-212ENST00000558911 C1orf229Q6ZS94 237 aaPredicted RBP6.25□□□□□ -1.41
LRRC28-212ENST00000558911 KLRG1Q96E93 195 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms