RNA–Protein interactions for RNA: ENST00000558714.5

TMOD3-205, Transcript of tropomodulin 3, humanhuman

TSL 3

Gene TMOD3, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-205ENST00000558714 PCDHB9Q9Y5E1 797 aa5.43□□□□□ -1.54
TMOD3-205ENST00000558714 CARNS1A5YM72 827 aa5.42□□□□□ -1.54
TMOD3-205ENST00000558714 TMEM88BA6NKF7 163 aa5.42□□□□□ -1.54
TMOD3-205ENST00000558714 SKIP12755 728 aa5.42□□□□□ -1.54
TMOD3-205ENST00000558714 KANK4Q5T7N3 995 aaPredicted RBP5.42□□□□□ -1.54
TMOD3-205ENST00000558714 PPP1R26Q5T8A7 1209 aaPredicted RBP5.42□□□□□ -1.54
TMOD3-205ENST00000558714 MEIOBQ8N635 442 aa5.42□□□□□ -1.54
TMOD3-205ENST00000558714 PGPEP1Q9NXJ5 209 aa5.42□□□□□ -1.54
TMOD3-205ENST00000558714 ZMIZ1Q9ULJ6 1067 aa5.42□□□□□ -1.54
TMOD3-205ENST00000558714 MCCD1P59942 119 aaPredicted RBP5.41□□□□□ -1.54
TMOD3-205ENST00000558714 SLFNL1Q499Z3 407 aa5.41□□□□□ -1.54
TMOD3-205ENST00000558714 INTS6LQ5JSJ4 861 aaKnown RBP5.41□□□□□ -1.54
TMOD3-205ENST00000558714 SEPT12Q8IYM1 358 aa5.41□□□□□ -1.54
TMOD3-205ENST00000558714 DEPDC4Q8N2C3 294 aa5.41□□□□□ -1.54
TMOD3-205ENST00000558714 PHTF2Q8N3S3 785 aa5.41□□□□□ -1.54
TMOD3-205ENST00000558714 ZFP42Q96MM3 310 aa5.41□□□□□ -1.54
TMOD3-205ENST00000558714 VRTNQ9H8Y1 702 aa5.41□□□□□ -1.54
TMOD3-205ENST00000558714 CEP126Q9P2H0 1117 aa5.41□□□□□ -1.54
TMOD3-205ENST00000558714 UPP2O95045 317 aa5.4□□□□□ -1.54
TMOD3-205ENST00000558714 NCOA4Q13772 614 aa5.4□□□□□ -1.54
TMOD3-205ENST00000558714 ELOAQ14241 798 aaKnown RBP5.4□□□□□ -1.54
TMOD3-205ENST00000558714 CCDC125Q86Z20 511 aa5.4□□□□□ -1.54
TMOD3-205ENST00000558714 RNF135Q8IUD6 432 aa5.4□□□□□ -1.54
TMOD3-205ENST00000558714 PLPP7Q8NBV4 271 aa5.4□□□□□ -1.54
TMOD3-205ENST00000558714 TRIM52Q96A61 297 aa5.4□□□□□ -1.54
TMOD3-205ENST00000558714 PURBQ96QR8 312 aaKnown RBP5.4□□□□□ -1.54
TMOD3-205ENST00000558714 TSEN34Q9BSV6 310 aaKnown RBP5.4□□□□□ -1.54
TMOD3-205ENST00000558714 CHIC2Q9UKJ5 165 aa5.4□□□□□ -1.54
TMOD3-205ENST00000558714 CCDC9Q9Y3X0 531 aaKnown RBP5.4□□□□□ -1.54
TMOD3-205ENST00000558714 FAM196BA6NMK8 535 aa5.39□□□□□ -1.55
TMOD3-205ENST00000558714 ESPNB1AK53 854 aa5.39□□□□□ -1.55
TMOD3-205ENST00000558714 USP17L15C9J2P7 530 aa5.39□□□□□ -1.55
TMOD3-205ENST00000558714 USP17L10C9JJH3 530 aa5.39□□□□□ -1.55
TMOD3-205ENST00000558714 USP17L13C9JLJ4 530 aa5.39□□□□□ -1.55
TMOD3-205ENST00000558714 USP17L12C9JPN9 530 aa5.39□□□□□ -1.55
TMOD3-205ENST00000558714 USP17L11C9JVI0 530 aa5.39□□□□□ -1.55
TMOD3-205ENST00000558714 USP17L21D6R901 530 aa5.39□□□□□ -1.55
TMOD3-205ENST00000558714 USP17L18D6R9N7 530 aa5.39□□□□□ -1.55
TMOD3-205ENST00000558714 USP17L22D6RA61 530 aa5.39□□□□□ -1.55
TMOD3-205ENST00000558714 USP17L17D6RBQ6 530 aa5.39□□□□□ -1.55
TMOD3-205ENST00000558714 USP17L19D6RCP7 530 aa5.39□□□□□ -1.55
TMOD3-205ENST00000558714 USP17L20D6RJB6 530 aa5.39□□□□□ -1.55
TMOD3-205ENST00000558714 BRD1O95696 1058 aa5.39□□□□□ -1.55
TMOD3-205ENST00000558714 KCNA1Q09470 495 aa5.39□□□□□ -1.55
TMOD3-205ENST00000558714 USP17L24Q0WX57 530 aa5.39□□□□□ -1.55
TMOD3-205ENST00000558714 TMEM164Q5U3C3 297 aa5.39□□□□□ -1.55
TMOD3-205ENST00000558714 Q6ZVU0 165 aa5.39□□□□□ -1.55
TMOD3-205ENST00000558714 LINC00528Q8N1L1 170 aa5.39□□□□□ -1.55
TMOD3-205ENST00000558714 STK32AQ8WU08 396 aa5.39□□□□□ -1.55
TMOD3-205ENST00000558714 NOVA2Q9UNW9 492 aaKnown RBP5.39□□□□□ -1.55
TMOD3-205ENST00000558714 BMP2P12643 396 aa5.38□□□□□ -1.55
TMOD3-205ENST00000558714 CRTC2Q53ET0 693 aaPredicted RBP5.38□□□□□ -1.55
TMOD3-205ENST00000558714 TREML4Q6UXN2 200 aa5.38□□□□□ -1.55
TMOD3-205ENST00000558714 MKRN1Q9UHC7 482 aaKnown RBP5.38□□□□□ -1.55
TMOD3-205ENST00000558714 PATL2C9JE40 543 aaKnown RBP5.37□□□□□ -1.55
TMOD3-205ENST00000558714 ATP5J2-PTCD1G3V325 749 aa5.37□□□□□ -1.55
TMOD3-205ENST00000558714 ERVH48-1M5A8F1 160 aa5.37□□□□□ -1.55
TMOD3-205ENST00000558714 PTK7Q13308 1070 aa5.37□□□□□ -1.55
TMOD3-205ENST00000558714 EML3Q32P44 896 aa5.37□□□□□ -1.55
TMOD3-205ENST00000558714 MAP7D1Q3KQU3 841 aa5.37□□□□□ -1.55
TMOD3-205ENST00000558714 C6orf118Q5T5N4 469 aa5.37□□□□□ -1.55
TMOD3-205ENST00000558714 RNF20Q5VTR2 975 aa5.37□□□□□ -1.55
TMOD3-205ENST00000558714 NPAS3Q8IXF0 933 aa5.37□□□□□ -1.55
TMOD3-205ENST00000558714 CCDC85AQ96PX6 553 aaPredicted RBP5.37□□□□□ -1.55
TMOD3-205ENST00000558714 DOLKQ9UPQ8 538 aa5.37□□□□□ -1.55
TMOD3-205ENST00000558714 TERTO14746 1132 aaKnown RBP5.36□□□□□ -1.55
TMOD3-205ENST00000558714 LZTS3O60299 673 aaPredicted RBP5.36□□□□□ -1.55
TMOD3-205ENST00000558714 WFS1O76024 890 aa5.36□□□□□ -1.55
TMOD3-205ENST00000558714 NFX1Q12986 1120 aaKnown RBP5.36□□□□□ -1.55
TMOD3-205ENST00000558714 CBLBQ13191 982 aa5.36□□□□□ -1.55
TMOD3-205ENST00000558714 LCE2AQ5TA79 106 aaPredicted RBP5.36□□□□□ -1.55
TMOD3-205ENST00000558714 ZNF784Q8NCA9 323 aaPredicted RBP5.36□□□□□ -1.55
TMOD3-205ENST00000558714 SOS2Q07890 1332 aaPredicted RBP5.35□□□□□ -1.55
TMOD3-205ENST00000558714 SPINT1O43278 529 aa5.35□□□□□ -1.55
TMOD3-205ENST00000558714 LILRA1O75019 489 aa5.35□□□□□ -1.55
TMOD3-205ENST00000558714 GIGYF1O75420 1035 aaPredicted RBP5.35□□□□□ -1.55
TMOD3-205ENST00000558714 RASA1P20936 1047 aa5.35□□□□□ -1.55
TMOD3-205ENST00000558714 RAB15P59190 212 aa5.35□□□□□ -1.55
TMOD3-205ENST00000558714 CLDN10P78369 228 aa5.35□□□□□ -1.55
TMOD3-205ENST00000558714 TSGA10IPQ3SY00 556 aa5.35□□□□□ -1.55
TMOD3-205ENST00000558714 LARP1Q6PKG0 1096 aaKnown RBP5.35□□□□□ -1.55
TMOD3-205ENST00000558714 GZF1Q9H116 711 aaPredicted RBP5.35□□□□□ -1.55
TMOD3-205ENST00000558714 TMPRSS4Q9NRS4 437 aa5.35□□□□□ -1.55
TMOD3-205ENST00000558714 NXF1Q9UBU9 619 aaKnown RBP5.35□□□□□ -1.55
TMOD3-205ENST00000558714 IVNS1ABPQ9Y6Y0 642 aa5.35□□□□□ -1.55
TMOD3-205ENST00000558714 MAN1A2O60476 641 aa5.34□□□□□ -1.55
TMOD3-205ENST00000558714 ADH1AP07327 375 aa5.34□□□□□ -1.55
TMOD3-205ENST00000558714 OXLD1Q5BKU9 147 aa5.34□□□□□ -1.55
TMOD3-205ENST00000558714 TMCO4Q5TGY1 634 aa5.34□□□□□ -1.55
TMOD3-205ENST00000558714 B4GALNT3Q6L9W6 998 aa5.34□□□□□ -1.55
TMOD3-205ENST00000558714 OGFOD1Q8N543 542 aa5.34□□□□□ -1.55
TMOD3-205ENST00000558714 ZNF594Q96JF6 807 aaPredicted RBP5.34□□□□□ -1.55
TMOD3-205ENST00000558714 KIAA1024Q9UPX6 916 aa5.34□□□□□ -1.55
TMOD3-205ENST00000558714 NOD1Q9Y239 953 aa5.34□□□□□ -1.55
TMOD3-205ENST00000558714 TTLL8A6PVC2 850 aa5.33□□□□□ -1.56
TMOD3-205ENST00000558714 ADD1P35611 737 aaKnown RBP5.33□□□□□ -1.56
TMOD3-205ENST00000558714 FAM69CQ0P6D2 419 aa5.33□□□□□ -1.56
TMOD3-205ENST00000558714 TRIM50Q86XT4 487 aa5.33□□□□□ -1.56
TMOD3-205ENST00000558714 ANKMY2Q8IV38 441 aa5.33□□□□□ -1.56
TMOD3-205ENST00000558714 SIX5Q8N196 739 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms