RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 ZNF330Q9Y3S2 320 aaPredicted RBP13.77□□□□□ -0.2
CSPG4P12-201ENST00000558282 LAMC3Q9Y6N6 1575 aa13.77□□□□□ -0.21
CSPG4P12-201ENST00000558282 SART3Q15020 963 aaKnown RBP13.77□□□□□ -0.21
CSPG4P12-201ENST00000558282 PLCD3Q8N3E9 789 aa13.77□□□□□ -0.21
CSPG4P12-201ENST00000558282 PAIP2Q9BPZ3 127 aaKnown RBP13.77□□□□□ -0.21
CSPG4P12-201ENST00000558282 TOP1P11387 765 aaKnown RBP13.77□□□□□ -0.21
CSPG4P12-201ENST00000558282 CEBPZQ03701 1054 aaKnown RBP13.77□□□□□ -0.21
CSPG4P12-201ENST00000558282 ZNF428Q96B54 188 aa13.77□□□□□ -0.21
CSPG4P12-201ENST00000558282 CPSF2Q9P2I0 782 aaKnown RBP13.77□□□□□ -0.21
CSPG4P12-201ENST00000558282 ATF7IPQ6VMQ6 1270 aa13.76□□□□□ -0.21
CSPG4P12-201ENST00000558282 IBSPP21815 317 aaPredicted RBP13.76□□□□□ -0.21
CSPG4P12-201ENST00000558282 ZSCAN23Q3MJ62 389 aa13.76□□□□□ -0.21
CSPG4P12-201ENST00000558282 RSPH14Q9UHP6 348 aa13.76□□□□□ -0.21
CSPG4P12-201ENST00000558282 A0A1B0GUA9 196 aa13.76□□□□□ -0.21
CSPG4P12-201ENST00000558282 PPP2R1AP30153 589 aa13.76□□□□□ -0.21
CSPG4P12-201ENST00000558282 KIF3BO15066 747 aa13.75□□□□□ -0.21
CSPG4P12-201ENST00000558282 SLU7O95391 586 aaKnown RBP13.75□□□□□ -0.21
CSPG4P12-201ENST00000558282 GBP6Q6ZN66 633 aa13.75□□□□□ -0.21
CSPG4P12-201ENST00000558282 GRIN2BQ13224 1484 aa13.75□□□□□ -0.21
CSPG4P12-201ENST00000558282 MAP3K1Q13233 1512 aa13.75□□□□□ -0.21
CSPG4P12-201ENST00000558282 SARNPP82979 210 aaKnown RBP13.75□□□□□ -0.21
CSPG4P12-201ENST00000558282 TEFQ10587 303 aa13.75□□□□□ -0.21
CSPG4P12-201ENST00000558282 PDRG1Q9NUG6 133 aa13.75□□□□□ -0.21
CSPG4P12-201ENST00000558282 SCAPERQ9BY12 1400 aa13.75□□□□□ -0.21
CSPG4P12-201ENST00000558282 PLEKHH2Q8IVE3 1493 aa13.75□□□□□ -0.21
CSPG4P12-201ENST00000558282 PAFAH1B1P43034 410 aa13.75□□□□□ -0.21
CSPG4P12-201ENST00000558282 KRT32Q14532 448 aa13.75□□□□□ -0.21
CSPG4P12-201ENST00000558282 EFCAB2Q5VUJ9 269 aa13.75□□□□□ -0.21
CSPG4P12-201ENST00000558282 CC2D2AQ9P2K1 1620 aa13.75□□□□□ -0.21
CSPG4P12-201ENST00000558282 TUBBP07437 444 aa13.75□□□□□ -0.21
CSPG4P12-201ENST00000558282 ZFYVE27Q5T4F4 411 aa13.75□□□□□ -0.21
CSPG4P12-201ENST00000558282 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.75□□□□□ -0.21
CSPG4P12-201ENST00000558282 TRAK1Q9UPV9 953 aa13.75□□□□□ -0.21
CSPG4P12-201ENST00000558282 GCOM1H8Y6P7 765 aaPredicted RBP13.74□□□□□ -0.21
CSPG4P12-201ENST00000558282 MYZAPP0CAP1 466 aa13.74□□□□□ -0.21
CSPG4P12-201ENST00000558282 SYCP1Q15431 976 aa13.74□□□□□ -0.21
CSPG4P12-201ENST00000558282 TBC1D32Q96NH3 1257 aa13.74□□□□□ -0.21
CSPG4P12-201ENST00000558282 EBAG9O00559 213 aa13.74□□□□□ -0.21
CSPG4P12-201ENST00000558282 MICALL1Q8N3F8 863 aa13.74□□□□□ -0.21
CSPG4P12-201ENST00000558282 RRBP1Q9P2E9 1410 aaKnown RBP13.74□□□□□ -0.21
CSPG4P12-201ENST00000558282 BIVM-ERCC5R4GMW8 1640 aa13.74□□□□□ -0.21
CSPG4P12-201ENST00000558282 CUL7Q14999 1698 aa13.74□□□□□ -0.21
CSPG4P12-201ENST00000558282 BLOC1S2Q6QNY1 142 aa13.74□□□□□ -0.21
CSPG4P12-201ENST00000558282 LRRC9Q6ZRR7 1453 aa13.74□□□□□ -0.21
CSPG4P12-201ENST00000558282 IFT140Q96RY7 1462 aa13.74□□□□□ -0.21
CSPG4P12-201ENST00000558282 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.74□□□□□ -0.21
CSPG4P12-201ENST00000558282 EXOSC9Q06265 439 aaKnown RBP13.74□□□□□ -0.21
CSPG4P12-201ENST00000558282 NAA15Q9BXJ9 866 aaKnown RBP13.74□□□□□ -0.21
CSPG4P12-201ENST00000558282 SH2B1Q9NRF2 756 aaPredicted RBP13.74□□□□□ -0.21
CSPG4P12-201ENST00000558282 CCDC9Q9Y3X0 531 aaKnown RBP13.74□□□□□ -0.21
CSPG4P12-201ENST00000558282 GNAI2P04899 355 aa13.73□□□□□ -0.21
CSPG4P12-201ENST00000558282 CAPN2P17655 700 aa13.73□□□□□ -0.21
CSPG4P12-201ENST00000558282 MRC2Q9UBG0 1479 aa13.73□□□□□ -0.21
CSPG4P12-201ENST00000558282 SURF6O75683 361 aaKnown RBP13.73□□□□□ -0.21
CSPG4P12-201ENST00000558282 TRMT1Q9NXH9 659 aaKnown RBP13.73□□□□□ -0.21
CSPG4P12-201ENST00000558282 ANKRD62A6NC57 917 aa13.73□□□□□ -0.21
CSPG4P12-201ENST00000558282 MEX3CQ5U5Q3 659 aaKnown RBP13.73□□□□□ -0.21
CSPG4P12-201ENST00000558282 PANK2Q9BZ23 570 aa13.73□□□□□ -0.21
CSPG4P12-201ENST00000558282 NOB1Q9ULX3 412 aaKnown RBP13.73□□□□□ -0.21
CSPG4P12-201ENST00000558282 UNC13AQ9UPW8 1703 aa13.73□□□□□ -0.21
CSPG4P12-201ENST00000558282 CSB-PGBD3P0DP91 1061 aa13.73□□□□□ -0.21
CSPG4P12-201ENST00000558282 SPA17Q15506 151 aa13.73□□□□□ -0.21
CSPG4P12-201ENST00000558282 CCAR1Q8IX12 1150 aaKnown RBP13.73□□□□□ -0.21
CSPG4P12-201ENST00000558282 SETSIPP0DME0 302 aa13.72□□□□□ -0.21
CSPG4P12-201ENST00000558282 DHX37Q8IY37 1157 aaKnown RBP13.72□□□□□ -0.21
CSPG4P12-201ENST00000558282 CDKL5O76039 1030 aa13.72□□□□□ -0.21
CSPG4P12-201ENST00000558282 RSRC1Q96IZ7 334 aaKnown RBP13.72□□□□□ -0.21
CSPG4P12-201ENST00000558282 RPAP2Q8IXW5 612 aaPredicted RBP13.72□□□□□ -0.21
CSPG4P12-201ENST00000558282 C10orf67Q8IYJ2 551 aa13.72□□□□□ -0.21
CSPG4P12-201ENST00000558282 TMX4Q9H1E5 349 aaPredicted RBP13.72□□□□□ -0.21
CSPG4P12-201ENST00000558282 UBE2HP62256 183 aa13.71□□□□□ -0.21
CSPG4P12-201ENST00000558282 IFFO1Q0D2I5 559 aa13.71□□□□□ -0.21
CSPG4P12-201ENST00000558282 TCEAL9Q9UHQ7 104 aa13.71□□□□□ -0.21
CSPG4P12-201ENST00000558282 STX1AQ16623 288 aa13.71□□□□□ -0.21
CSPG4P12-201ENST00000558282 CAMK4Q16566 473 aa13.71□□□□□ -0.22
CSPG4P12-201ENST00000558282 MYOM3Q5VTT5 1437 aa13.71□□□□□ -0.22
CSPG4P12-201ENST00000558282 TOPBP1Q92547 1522 aa13.71□□□□□ -0.22
CSPG4P12-201ENST00000558282 C1orf141Q5JVX7 400 aa13.7□□□□□ -0.22
CSPG4P12-201ENST00000558282 NBPF11Q86T75 865 aa13.7□□□□□ -0.22
CSPG4P12-201ENST00000558282 TSPYL4Q9UJ04 414 aa13.7□□□□□ -0.22
CSPG4P12-201ENST00000558282 NOL7Q9UMY1 257 aaKnown RBP13.7□□□□□ -0.22
CSPG4P12-201ENST00000558282 CCT4P50991 539 aaKnown RBP13.7□□□□□ -0.22
CSPG4P12-201ENST00000558282 WASHC4Q2M389 1173 aa13.7□□□□□ -0.22
CSPG4P12-201ENST00000558282 AQRO60306 1485 aaKnown RBP eCLIP13.7□□□□□ -0.22
CSPG4P12-201ENST00000558282 EIF5P55010 431 aaKnown RBP13.7□□□□□ -0.22
CSPG4P12-201ENST00000558282 GGT6Q6P531 493 aa13.7□□□□□ -0.22
CSPG4P12-201ENST00000558282 TRIM22Q8IYM9 498 aa13.7□□□□□ -0.22
CSPG4P12-201ENST00000558282 RRAGDQ9NQL2 400 aaPredicted RBP13.7□□□□□ -0.22
CSPG4P12-201ENST00000558282 ABCA10Q8WWZ4 1543 aa13.7□□□□□ -0.22
CSPG4P12-201ENST00000558282 USO1O60763 962 aaKnown RBP13.7□□□□□ -0.22
CSPG4P12-201ENST00000558282 OPA1O60313 960 aa13.69□□□□□ -0.22
CSPG4P12-201ENST00000558282 SLFN5Q08AF3 891 aa13.69□□□□□ -0.22
CSPG4P12-201ENST00000558282 EIF2S2P20042 333 aaKnown RBP13.69□□□□□ -0.22
CSPG4P12-201ENST00000558282 EHBP1Q8NDI1 1231 aa13.69□□□□□ -0.22
CSPG4P12-201ENST00000558282 WDR66Q8TBY9 1149 aa13.69□□□□□ -0.22
CSPG4P12-201ENST00000558282 CDK5RAP3Q96JB5 506 aa13.69□□□□□ -0.22
CSPG4P12-201ENST00000558282 ZNF165P49910 485 aa13.69□□□□□ -0.22
CSPG4P12-201ENST00000558282 OTUD6BQ8N6M0 293 aa13.69□□□□□ -0.22
CSPG4P12-201ENST00000558282 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.69□□□□□ -0.22
CSPG4P12-201ENST00000558282 EHBP1L1Q8N3D4 1523 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms