RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 PNPLA7Q6ZV29 1317 aa14.41□□□□□ -0.1
RDH11-210ENST00000557331 CEP350Q5VT06 3117 aa14.41□□□□□ -0.1
RDH11-210ENST00000557331 AMPHP49418 695 aa14.41□□□□□ -0.1
RDH11-210ENST00000557331 CD163L1Q9NR16 1453 aa14.41□□□□□ -0.1
RDH11-210ENST00000557331 KLHL34Q8N239 644 aa14.4□□□□□ -0.1
RDH11-210ENST00000557331 CCNL1Q9UK58 526 aaPredicted RBP14.4□□□□□ -0.1
RDH11-210ENST00000557331 A0A1W2PP64 1363 aa14.39□□□□□ -0.11
RDH11-210ENST00000557331 USP47Q96K76 1375 aa14.39□□□□□ -0.11
RDH11-210ENST00000557331 PELP1Q8IZL8 1130 aaKnown RBP14.39□□□□□ -0.11
RDH11-210ENST00000557331 CD2APQ9Y5K6 639 aa14.39□□□□□ -0.11
RDH11-210ENST00000557331 COL24A1Q17RW2 1714 aa14.38□□□□□ -0.11
RDH11-210ENST00000557331 HOXC9P31274 260 aa14.38□□□□□ -0.11
RDH11-210ENST00000557331 LTV1Q96GA3 475 aaPredicted RBP14.38□□□□□ -0.11
RDH11-210ENST00000557331 RTL1A6NKG5 1358 aa14.37□□□□□ -0.11
RDH11-210ENST00000557331 RAPGEF4Q8WZA2 1011 aa14.37□□□□□ -0.11
RDH11-210ENST00000557331 SMG6Q86US8 1419 aaKnown RBP14.36□□□□□ -0.11
RDH11-210ENST00000557331 MSH5O43196 834 aa14.36□□□□□ -0.11
RDH11-210ENST00000557331 MAP3K19Q56UN5 1328 aa14.36□□□□□ -0.11
RDH11-210ENST00000557331 KIF24Q5T7B8 1368 aa14.34□□□□□ -0.11
RDH11-210ENST00000557331 SMARCC1Q92922 1105 aaPredicted RBP14.34□□□□□ -0.11
RDH11-210ENST00000557331 LY75O60449 1722 aa14.33□□□□□ -0.12
RDH11-210ENST00000557331 TATP17735 454 aaPredicted RBP14.33□□□□□ -0.12
RDH11-210ENST00000557331 IFFO2Q5TF58 517 aa14.33□□□□□ -0.12
RDH11-210ENST00000557331 COL23A1Q86Y22 540 aaPredicted RBP14.33□□□□□ -0.12
RDH11-210ENST00000557331 NLGN2Q8NFZ4 835 aa14.33□□□□□ -0.12
RDH11-210ENST00000557331 PCDH11XQ9BZA7 1347 aa14.33□□□□□ -0.12
RDH11-210ENST00000557331 PCDH11YQ9BZA8 1340 aa14.33□□□□□ -0.12
RDH11-210ENST00000557331 NSD2O96028 1365 aa14.33□□□□□ -0.12
RDH11-210ENST00000557331 TONSLQ96HA7 1378 aa14.33□□□□□ -0.12
RDH11-210ENST00000557331 NSD3Q9BZ95 1437 aa14.32□□□□□ -0.12
RDH11-210ENST00000557331 CDCA8Q53HL2 280 aa14.32□□□□□ -0.12
RDH11-210ENST00000557331 NBPF6Q5VWK0 638 aa14.31□□□□□ -0.12
RDH11-210ENST00000557331 NBPF4Q96M43 638 aa14.31□□□□□ -0.12
RDH11-210ENST00000557331 GPBP1L1Q9HC44 474 aaPredicted RBP14.31□□□□□ -0.12
RDH11-210ENST00000557331 YBX3P16989 372 aaKnown RBP eCLIP14.3□□□□□ -0.128e-7■■□□□ 12.2
RDH11-210ENST00000557331 KCNQ4P56696 695 aa14.3□□□□□ -0.12
RDH11-210ENST00000557331 TESK2Q96S53 571 aa14.3□□□□□ -0.12
RDH11-210ENST00000557331 ST20-MTHFSA0A0A6YYL1 179 aa14.29□□□□□ -0.12
RDH11-210ENST00000557331 INSRP06213 1382 aa14.29□□□□□ -0.12
RDH11-210ENST00000557331 FYB1O15117 783 aa14.28□□□□□ -0.12
RDH11-210ENST00000557331 MEGF6O75095 1541 aa14.28□□□□□ -0.12
RDH11-210ENST00000557331 TMF1P82094 1093 aa14.28□□□□□ -0.12
RDH11-210ENST00000557331 DOT1LQ8TEK3 1739 aa14.28□□□□□ -0.12
RDH11-210ENST00000557331 AK7Q96M32 723 aa14.28□□□□□ -0.12
RDH11-210ENST00000557331 FLT4P35916 1363 aa14.27□□□□□ -0.12
RDH11-210ENST00000557331 PALLDQ8WX93 1383 aa14.27□□□□□ -0.12
RDH11-210ENST00000557331 ATP10DQ9P241 1426 aa14.26□□□□□ -0.13
RDH11-210ENST00000557331 SSFA2P28290 1259 aa14.26□□□□□ -0.13
RDH11-210ENST00000557331 RRS1Q15050 365 aaKnown RBP14.26□□□□□ -0.13
RDH11-210ENST00000557331 MPRIPQ6WCQ1 1025 aa14.26□□□□□ -0.13
RDH11-210ENST00000557331 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.26□□□□□ -0.13
RDH11-210ENST00000557331 TUBGCP6Q96RT7 1819 aa14.26□□□□□ -0.13
RDH11-210ENST00000557331 SHANK3Q9BYB0 1731 aa14.26□□□□□ -0.13
RDH11-210ENST00000557331 HSPA6P17066 643 aa14.25□□□□□ -0.13
RDH11-210ENST00000557331 NKX1-1Q15270 411 aaPredicted RBP14.25□□□□□ -0.13
RDH11-210ENST00000557331 SPG7Q9UQ90 795 aa14.25□□□□□ -0.13
RDH11-210ENST00000557331 MSL1Q68DK7 614 aa14.24□□□□□ -0.13
RDH11-210ENST00000557331 HSP90AB2PQ58FF8 381 aa14.23□□□□□ -0.13
RDH11-210ENST00000557331 GGNBP2Q9H3C7 697 aa14.23□□□□□ -0.13
RDH11-210ENST00000557331 C5P01031 1676 aa14.23□□□□□ -0.13
RDH11-210ENST00000557331 PLEKHG2Q9H7P9 1386 aa14.22□□□□□ -0.13
RDH11-210ENST00000557331 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.22□□□□□ -0.13
RDH11-210ENST00000557331 CYP27B1O15528 508 aa14.22□□□□□ -0.13
RDH11-210ENST00000557331 FBLN1P23142 703 aa14.22□□□□□ -0.13
RDH11-210ENST00000557331 USHBP1Q8N6Y0 703 aa14.22□□□□□ -0.13
RDH11-210ENST00000557331 ADCY9O60503 1353 aa14.22□□□□□ -0.13
RDH11-210ENST00000557331 LOC102724428A0A0B4J2F2 783 aa14.21□□□□□ -0.13
RDH11-210ENST00000557331 SIK1P57059 783 aa14.21□□□□□ -0.13
RDH11-210ENST00000557331 IGSF1Q8N6C5 1336 aa14.2□□□□□ -0.14
RDH11-210ENST00000557331 RGPD2P0DJD1 1756 aa14.2□□□□□ -0.14
RDH11-210ENST00000557331 PIGBQ92521 554 aa14.2□□□□□ -0.14
RDH11-210ENST00000557331 TMOD3Q9NYL9 352 aa14.2□□□□□ -0.14
RDH11-210ENST00000557331 TGFB2P61812 414 aa14.19□□□□□ -0.14
RDH11-210ENST00000557331 IFNL2Q8IZJ0 200 aa14.19□□□□□ -0.14
RDH11-210ENST00000557331 NLGN1Q8N2Q7 840 aa14.19□□□□□ -0.14
RDH11-210ENST00000557331 TAF1LQ8IZX4 1826 aa14.19□□□□□ -0.14
RDH11-210ENST00000557331 C4BP0C0L5 1744 aa14.18□□□□□ -0.14
RDH11-210ENST00000557331 ADRA2BP18089 450 aa14.18□□□□□ -0.14
RDH11-210ENST00000557331 WASHC2AQ641Q2 1341 aa14.17□□□□□ -0.14
RDH11-210ENST00000557331 PHF14O94880 888 aa14.17□□□□□ -0.14
RDH11-210ENST00000557331 APLP1P51693 650 aa14.17□□□□□ -0.14
RDH11-210ENST00000557331 NCAPD2Q15021 1401 aa14.16□□□□□ -0.14
RDH11-210ENST00000557331 GNPATO15228 680 aa14.16□□□□□ -0.14
RDH11-210ENST00000557331 HSP90AB1P08238 724 aaKnown RBP14.16□□□□□ -0.14
RDH11-210ENST00000557331 ATP6V1AP38606 617 aa14.16□□□□□ -0.14
RDH11-210ENST00000557331 TRAPPC3LQ5T215 181 aa14.16□□□□□ -0.14
RDH11-210ENST00000557331 ERVV-2B6SEH9 535 aa14.15□□□□□ -0.14
RDH11-210ENST00000557331 TOMM70O94826 608 aa14.15□□□□□ -0.14
RDH11-210ENST00000557331 RC3H1Q5TC82 1133 aaKnown RBP14.15□□□□□ -0.14
RDH11-210ENST00000557331 RTCBQ9Y3I0 505 aaKnown RBP14.15□□□□□ -0.14
RDH11-210ENST00000557331 UBR3Q6ZT12 1888 aa14.14□□□□□ -0.15
RDH11-210ENST00000557331 ITGB4P16144 1822 aa14.14□□□□□ -0.15
RDH11-210ENST00000557331 PPM1GO15355 546 aaPredicted RBP14.14□□□□□ -0.15
RDH11-210ENST00000557331 LINC00116Q8NCU8 138 aa14.14□□□□□ -0.15
RDH11-210ENST00000557331 ZNF526Q8TF50 670 aaPredicted RBP14.14□□□□□ -0.15
RDH11-210ENST00000557331 PKD1L3Q7Z443 1732 aa14.13□□□□□ -0.15
RDH11-210ENST00000557331 KIF3CO14782 793 aa14.13□□□□□ -0.15
RDH11-210ENST00000557331 MMP10P09238 476 aa14.13□□□□□ -0.15
RDH11-210ENST00000557331 PHKG2P15735 406 aa14.13□□□□□ -0.15
RDH11-210ENST00000557331 CCDC87Q9NVE4 849 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms