RNA–Protein interactions for RNA: ENST00000557085.1

PSMC6-213, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 2

Gene PSMC6, Length 890 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-213ENST00000557085 ATP1A2P50993 1020 aa8.73□□□□□ -1.01
PSMC6-213ENST00000557085 OGFOD1Q8N543 542 aa8.73□□□□□ -1.01
PSMC6-213ENST00000557085 PCDHB9Q9Y5E1 797 aa8.73□□□□□ -1.01
PSMC6-213ENST00000557085 SERPINB4P48594 390 aa8.72□□□□□ -1.01
PSMC6-213ENST00000557085 MMP16P51512 607 aa8.72□□□□□ -1.01
PSMC6-213ENST00000557085 KCNH2Q12809 1159 aa8.72□□□□□ -1.01
PSMC6-213ENST00000557085 DPYDQ12882 1025 aa8.72□□□□□ -1.01
PSMC6-213ENST00000557085 SIRT1Q96EB6 747 aa8.72□□□□□ -1.01
PSMC6-213ENST00000557085 CLDN10P78369 228 aa8.71□□□□□ -1.02
PSMC6-213ENST00000557085 NOM1Q5C9Z4 860 aaKnown RBP8.71□□□□□ -1.02
PSMC6-213ENST00000557085 SIX5Q8N196 739 aa8.71□□□□□ -1.02
PSMC6-213ENST00000557085 CRIPAKQ8N1N5 446 aa8.71□□□□□ -1.02
PSMC6-213ENST00000557085 LARGE2Q8N3Y3 721 aa8.71□□□□□ -1.02
PSMC6-213ENST00000557085 DACH1Q9UI36 760 aa8.71□□□□□ -1.02
PSMC6-213ENST00000557085 RPIAP49247 311 aa8.7□□□□□ -1.02
PSMC6-213ENST00000557085 MARSP56192 900 aaKnown RBP8.7□□□□□ -1.02
PSMC6-213ENST00000557085 ADAM32Q8TC27 787 aa8.7□□□□□ -1.02
PSMC6-213ENST00000557085 NUDT12Q9BQG2 462 aa8.7□□□□□ -1.02
PSMC6-213ENST00000557085 DNAAF2Q9NVR5 837 aaKnown RBP8.7□□□□□ -1.02
PSMC6-213ENST00000557085 EGFL7Q9UHF1 273 aa8.7□□□□□ -1.02
PSMC6-213ENST00000557085 NOD1Q9Y239 953 aa8.7□□□□□ -1.02
PSMC6-213ENST00000557085 DKK1O94907 266 aa8.69□□□□□ -1.02
PSMC6-213ENST00000557085 CD2BP2O95400 341 aaKnown RBP8.69□□□□□ -1.02
PSMC6-213ENST00000557085 ZNF16P17020 682 aaPredicted RBP8.69□□□□□ -1.02
PSMC6-213ENST00000557085 CCDC24Q8N4L8 307 aa8.69□□□□□ -1.02
PSMC6-213ENST00000557085 MRRFQ96E11 262 aaKnown RBP8.69□□□□□ -1.02
PSMC6-213ENST00000557085 KIAA1522Q9P206 1035 aaPredicted RBP8.69□□□□□ -1.02
PSMC6-213ENST00000557085 SH3BP5LQ7L8J4 393 aa8.68□□□□□ -1.02
PSMC6-213ENST00000557085 ZNF594Q96JF6 807 aaPredicted RBP8.68□□□□□ -1.02
PSMC6-213ENST00000557085 ARHGAP9Q9BRR9 750 aa8.68□□□□□ -1.02
PSMC6-213ENST00000557085 SHROOM4Q9ULL8 1493 aa8.68□□□□□ -1.02
PSMC6-213ENST00000557085 WFS1O76024 890 aa8.67□□□□□ -1.02
PSMC6-213ENST00000557085 AVPP01185 164 aa8.67□□□□□ -1.02
PSMC6-213ENST00000557085 OCLNQ16625 522 aa8.67□□□□□ -1.02
PSMC6-213ENST00000557085 TAS1R3Q7RTX0 852 aa8.67□□□□□ -1.02
PSMC6-213ENST00000557085 BCL2L13Q9BXK5 485 aa8.67□□□□□ -1.02
PSMC6-213ENST00000557085 TOR4AQ9NXH8 423 aa8.67□□□□□ -1.02
PSMC6-213ENST00000557085 GMPR2Q9P2T1 348 aaKnown RBP8.67□□□□□ -1.02
PSMC6-213ENST00000557085 C11orf95C9JLR9 678 aaPredicted RBP8.66□□□□□ -1.02
PSMC6-213ENST00000557085 AXIN1O15169 862 aa8.66□□□□□ -1.02
PSMC6-213ENST00000557085 SEC13P55735 322 aa8.66□□□□□ -1.02
PSMC6-213ENST00000557085 NPAS4Q8IUM7 802 aa8.66□□□□□ -1.02
PSMC6-213ENST00000557085 CXXC1Q9P0U4 656 aaPredicted RBP8.66□□□□□ -1.02
PSMC6-213ENST00000557085 DOLKQ9UPQ8 538 aa8.66□□□□□ -1.02
PSMC6-213ENST00000557085 KIAA1024Q9UPX6 916 aa8.66□□□□□ -1.02
PSMC6-213ENST00000557085 ZBTB33Q86T24 672 aa8.65□□□□□ -1.02
PSMC6-213ENST00000557085 BIN2Q9UBW5 565 aaPredicted RBP8.65□□□□□ -1.02
PSMC6-213ENST00000557085 ZBTB7BO15156 539 aaPredicted RBP8.64□□□□□ -1.03
PSMC6-213ENST00000557085 GTF2IP78347 998 aa8.64□□□□□ -1.03
PSMC6-213ENST00000557085 TSGA10IPQ3SY00 556 aa8.64□□□□□ -1.03
PSMC6-213ENST00000557085 SH3RF1Q7Z6J0 888 aa8.64□□□□□ -1.03
PSMC6-213ENST00000557085 CYP4X1Q8N118 509 aa8.64□□□□□ -1.03
PSMC6-213ENST00000557085 CCDC85AQ96PX6 553 aaPredicted RBP8.64□□□□□ -1.03
PSMC6-213ENST00000557085 ANKRD33BA6NCL7 494 aa8.63□□□□□ -1.03
PSMC6-213ENST00000557085 CTC1Q2NKJ3 1217 aa8.63□□□□□ -1.03
PSMC6-213ENST00000557085 DZIP3Q86Y13 1208 aaKnown RBP8.63□□□□□ -1.03
PSMC6-213ENST00000557085 GIPC2Q8TF65 315 aa8.63□□□□□ -1.03
PSMC6-213ENST00000557085 UNC93B1Q9H1C4 597 aa8.63□□□□□ -1.03
PSMC6-213ENST00000557085 PRMT3O60678 531 aa8.62□□□□□ -1.03
PSMC6-213ENST00000557085 VAMP1P23763 118 aa8.62□□□□□ -1.03
PSMC6-213ENST00000557085 SCNN1AP37088 669 aa8.62□□□□□ -1.03
PSMC6-213ENST00000557085 NFX1Q12986 1120 aaKnown RBP8.62□□□□□ -1.03
PSMC6-213ENST00000557085 TRIM32Q13049 653 aa8.62□□□□□ -1.03
PSMC6-213ENST00000557085 CCDC102BQ68D86 513 aa8.62□□□□□ -1.03
PSMC6-213ENST00000557085 RBM19Q9Y4C8 960 aaKnown RBP8.62□□□□□ -1.03
PSMC6-213ENST00000557085 ICMTO60725 284 aa8.61□□□□□ -1.03
PSMC6-213ENST00000557085 OXLD1Q5BKU9 147 aa8.61□□□□□ -1.03
PSMC6-213ENST00000557085 RNF20Q5VTR2 975 aa8.61□□□□□ -1.03
PSMC6-213ENST00000557085 STK17AQ9UEE5 414 aa8.61□□□□□ -1.03
PSMC6-213ENST00000557085 H3BRB1 525 aa8.6□□□□□ -1.03
PSMC6-213ENST00000557085 SMCPP49901 116 aaPredicted RBP8.6□□□□□ -1.03
PSMC6-213ENST00000557085 CCDC125Q86Z20 511 aa8.6□□□□□ -1.03
PSMC6-213ENST00000557085 TUT1Q9H6E5 874 aaKnown RBP8.6□□□□□ -1.03
PSMC6-213ENST00000557085 PCDHGA11Q9Y5H2 935 aa8.6□□□□□ -1.03
PSMC6-213ENST00000557085 WIPF1O43516 503 aa8.59□□□□□ -1.03
PSMC6-213ENST00000557085 C21orf2O43822 256 aa8.59□□□□□ -1.03
PSMC6-213ENST00000557085 ZNF326Q5BKZ1 582 aaKnown RBP8.59□□□□□ -1.03
PSMC6-213ENST00000557085 TPCN2Q8NHX9 752 aa8.59□□□□□ -1.03
PSMC6-213ENST00000557085 USP35Q9P2H5 1018 aa8.59□□□□□ -1.03
PSMC6-213ENST00000557085 TTC24A2A3L6 582 aaPredicted RBP8.58□□□□□ -1.04
PSMC6-213ENST00000557085 M0R2N6 131 aa8.58□□□□□ -1.04
PSMC6-213ENST00000557085 GIGYF1O75420 1035 aaPredicted RBP8.58□□□□□ -1.04
PSMC6-213ENST00000557085 ABL1P00519 1130 aa8.58□□□□□ -1.04
PSMC6-213ENST00000557085 TCF3P15923 654 aa8.58□□□□□ -1.04
PSMC6-213ENST00000557085 COL19A1Q14993 1142 aa8.58□□□□□ -1.04
PSMC6-213ENST00000557085 FBXO33Q7Z6M2 555 aa8.58□□□□□ -1.04
PSMC6-213ENST00000557085 GLYCTKQ8IVS8 523 aa8.58□□□□□ -1.04
PSMC6-213ENST00000557085 PRIMPOLQ96LW4 560 aa8.58□□□□□ -1.04
PSMC6-213ENST00000557085 ASB16Q96NS5 453 aa8.58□□□□□ -1.04
PSMC6-213ENST00000557085 SFI1A8K8P3 1242 aa8.57□□□□□ -1.04
PSMC6-213ENST00000557085 INSM1Q01101 510 aaPredicted RBP8.57□□□□□ -1.04
PSMC6-213ENST00000557085 ZNF211Q13398 564 aaPredicted RBP8.57□□□□□ -1.04
PSMC6-213ENST00000557085 SF3B2Q13435 895 aaKnown RBP8.57□□□□□ -1.04
PSMC6-213ENST00000557085 ERFEQ4G0M1 354 aa8.57□□□□□ -1.04
PSMC6-213ENST00000557085 PTCRAQ6ISU1 281 aaPredicted RBP8.57□□□□□ -1.04
PSMC6-213ENST00000557085 BPHLQ86WA6 291 aaPredicted RBP8.57□□□□□ -1.04
PSMC6-213ENST00000557085 SEPT12Q8IYM1 358 aa8.57□□□□□ -1.04
PSMC6-213ENST00000557085 CARD14Q9BXL6 1004 aa8.57□□□□□ -1.04
PSMC6-213ENST00000557085 MAGEB6P1A0A0J9YX57 407 aa8.56□□□□□ -1.04
PSMC6-213ENST00000557085 ESPNB1AK53 854 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms