RNA–Protein interactions for RNA: ENST00000556262.5

SDR39U1-218, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,960 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-218ENST00000556262 TNNQ9UQP3 1299 aa24.03■■□□□ 1.44
SDR39U1-218ENST00000556262 CHRNA2Q15822 529 aa24.02■■□□□ 1.44
SDR39U1-218ENST00000556262 ELL2O00472 640 aaPredicted RBP24.02■■□□□ 1.43
SDR39U1-218ENST00000556262 CRB1P82279 1406 aa24.01■■□□□ 1.43
SDR39U1-218ENST00000556262 PDE3AQ14432 1141 aa24.01■■□□□ 1.43
SDR39U1-218ENST00000556262 ERBB3P21860 1342 aa24■■□□□ 1.43
SDR39U1-218ENST00000556262 KIAA0232Q92628 1395 aa24■■□□□ 1.43
SDR39U1-218ENST00000556262 GNAT3A8MTJ3 354 aa24■■□□□ 1.43
SDR39U1-218ENST00000556262 CHL1O00533 1208 aa24■■□□□ 1.43
SDR39U1-218ENST00000556262 VAMP4O75379 141 aa24■■□□□ 1.43
SDR39U1-218ENST00000556262 C8orf58Q8NAV2 365 aa24■■□□□ 1.43
SDR39U1-218ENST00000556262 COL18A1P39060 1754 aa23.99■■□□□ 1.43
SDR39U1-218ENST00000556262 MIS18AQ9NYP9 233 aa23.99■■□□□ 1.43
SDR39U1-218ENST00000556262 RLBP1P12271 317 aa23.98■■□□□ 1.43
SDR39U1-218ENST00000556262 CLUAP1Q96AJ1 413 aa23.98■■□□□ 1.43
SDR39U1-218ENST00000556262 COG6Q9Y2V7 657 aa23.98■■□□□ 1.43
SDR39U1-218ENST00000556262 NCAPD2Q15021 1401 aa23.97■■□□□ 1.43
SDR39U1-218ENST00000556262 NHSL1Q5SYE7 1610 aa23.97■■□□□ 1.43
SDR39U1-218ENST00000556262 LTBP4Q8N2S1 1624 aa23.97■■□□□ 1.43
SDR39U1-218ENST00000556262 MAP3K5Q99683 1374 aa23.97■■□□□ 1.43
SDR39U1-218ENST00000556262 TWISTNBQ3B726 338 aaPredicted RBP23.96■■□□□ 1.43
SDR39U1-218ENST00000556262 HTATSF1O43719 755 aaKnown RBP23.96■■□□□ 1.43
SDR39U1-218ENST00000556262 KRT24Q2M2I5 525 aa23.96■■□□□ 1.43
SDR39U1-218ENST00000556262 IL17REQ8NFR9 667 aa23.96■■□□□ 1.43
SDR39U1-218ENST00000556262 ALDH1L2Q3SY69 923 aa23.95■■□□□ 1.42
SDR39U1-218ENST00000556262 ZKSCAN2Q63HK3 967 aa23.95■■□□□ 1.42
SDR39U1-218ENST00000556262 NOB1Q9ULX3 412 aaKnown RBP23.95■■□□□ 1.42
SDR39U1-218ENST00000556262 CAMTA1Q9Y6Y1 1673 aa23.95■■□□□ 1.42
SDR39U1-218ENST00000556262 CPDO75976 1380 aa23.94■■□□□ 1.42
SDR39U1-218ENST00000556262 NLRP2Q9NX02 1062 aa23.94■■□□□ 1.42
SDR39U1-218ENST00000556262 TCERG1O14776 1098 aaKnown RBP23.93■■□□□ 1.42
SDR39U1-218ENST00000556262 ZNF428Q96B54 188 aa23.92■■□□□ 1.42
SDR39U1-218ENST00000556262 TSPYL4Q9UJ04 414 aa23.92■■□□□ 1.42
SDR39U1-218ENST00000556262 LRRC37A3O60309 1634 aa23.91■■□□□ 1.42
SDR39U1-218ENST00000556262 CSB-PGBD3P0DP91 1061 aa23.91■■□□□ 1.42
SDR39U1-218ENST00000556262 TRIM27P14373 513 aa23.91■■□□□ 1.42
SDR39U1-218ENST00000556262 HAP1P54257 671 aaPredicted RBP23.91■■□□□ 1.42
SDR39U1-218ENST00000556262 PLEKHO1Q53GL0 409 aaPredicted RBP23.91■■□□□ 1.42
SDR39U1-218ENST00000556262 LMO7Q8WWI1 1683 aa23.91■■□□□ 1.42
SDR39U1-218ENST00000556262 ZNF530Q6P9A1 599 aaPredicted RBP23.91■■□□□ 1.42
SDR39U1-218ENST00000556262 PRDM11Q9NQV5 511 aa23.91■■□□□ 1.42
SDR39U1-218ENST00000556262 ROBO1Q9Y6N7 1651 aa23.9■■□□□ 1.42
SDR39U1-218ENST00000556262 ATF7IPQ6VMQ6 1270 aa23.89■■□□□ 1.42
SDR39U1-218ENST00000556262 FTSJ3Q8IY81 847 aaKnown RBP23.89■■□□□ 1.42
SDR39U1-218ENST00000556262 DZIP1LQ8IYY4 767 aaKnown RBP23.89■■□□□ 1.42
SDR39U1-218ENST00000556262 ABCA3Q99758 1704 aa23.89■■□□□ 1.41
SDR39U1-218ENST00000556262 AMOTQ4VCS5 1084 aa23.89■■□□□ 1.41
SDR39U1-218ENST00000556262 MRPL50Q8N5N7 158 aaKnown RBP23.89■■□□□ 1.41
SDR39U1-218ENST00000556262 LGR6Q9HBX8 967 aa23.89■■□□□ 1.41
SDR39U1-218ENST00000556262 KIF16BQ96L93 1317 aa23.89■■□□□ 1.41
SDR39U1-218ENST00000556262 ABCC6O95255 1503 aa23.88■■□□□ 1.41
SDR39U1-218ENST00000556262 AKAP4Q5JQC9 854 aa23.87■■□□□ 1.41
SDR39U1-218ENST00000556262 FAM208AQ9UK61 1670 aaKnown RBP23.86■■□□□ 1.41
SDR39U1-218ENST00000556262 BRPF1P55201 1214 aaPredicted RBP23.86■■□□□ 1.41
SDR39U1-218ENST00000556262 CEMIPQ8WUJ3 1361 aa23.86■■□□□ 1.41
SDR39U1-218ENST00000556262 MPRIPQ6WCQ1 1025 aa23.85■■□□□ 1.41
SDR39U1-218ENST00000556262 IPO8O15397 1037 aaKnown RBP23.85■■□□□ 1.41
SDR39U1-218ENST00000556262 TAF7Q15545 349 aaPredicted RBP23.85■■□□□ 1.41
SDR39U1-218ENST00000556262 RAPGEF4Q8WZA2 1011 aa23.85■■□□□ 1.41
SDR39U1-218ENST00000556262 MVPQ14764 893 aaKnown RBP23.84■■□□□ 1.41
SDR39U1-218ENST00000556262 MS4A1P11836 297 aa23.83■■□□□ 1.41
SDR39U1-218ENST00000556262 C1orf141Q5JVX7 400 aa23.83■■□□□ 1.41
SDR39U1-218ENST00000556262 MEGF6O75095 1541 aa23.82■■□□□ 1.4
SDR39U1-218ENST00000556262 KDM2BQ8NHM5 1336 aa23.81■■□□□ 1.4
SDR39U1-218ENST00000556262 TATP17735 454 aaPredicted RBP23.81■■□□□ 1.4
SDR39U1-218ENST00000556262 TMEM57Q8N5G2 664 aa23.81■■□□□ 1.4
SDR39U1-218ENST00000556262 VIRMAQ69YN4 1812 aaKnown RBP23.8■■□□□ 1.4
SDR39U1-218ENST00000556262 ITPRIPQ8IWB1 547 aa23.8■■□□□ 1.4
SDR39U1-218ENST00000556262 RNMTO43148 476 aaKnown RBP23.79■■□□□ 1.4
SDR39U1-218ENST00000556262 AHDC1Q5TGY3 1603 aaPredicted RBP23.79■■□□□ 1.4
SDR39U1-218ENST00000556262 WDR17Q8IZU2 1322 aa23.79■■□□□ 1.4
SDR39U1-218ENST00000556262 COL5A2P05997 1499 aaPredicted RBP23.78■■□□□ 1.4
SDR39U1-218ENST00000556262 TEFQ10587 303 aa23.78■■□□□ 1.4
SDR39U1-218ENST00000556262 TOM1L2Q6ZVM7 507 aa23.78■■□□□ 1.4
SDR39U1-218ENST00000556262 ARHGAP45Q92619 1136 aa23.78■■□□□ 1.4
SDR39U1-218ENST00000556262 BABAM1Q9NWV8 329 aa23.78■■□□□ 1.4
SDR39U1-218ENST00000556262 CENPQQ7L2Z9 268 aaPredicted RBP23.76■■□□□ 1.39
SDR39U1-218ENST00000556262 SKAP1Q86WV1 359 aa23.76■■□□□ 1.39
SDR39U1-218ENST00000556262 STRN4Q9NRL3 753 aa23.76■■□□□ 1.39
SDR39U1-218ENST00000556262 IGHDP01880 384 aa23.76■■□□□ 1.39
SDR39U1-218ENST00000556262 PCDHB15Q9Y5E8 787 aa23.76■■□□□ 1.39
SDR39U1-218ENST00000556262 DDX19BQ9UMR2 479 aa23.75■■□□□ 1.39
SDR39U1-218ENST00000556262 SPG7Q9UQ90 795 aa23.74■■□□□ 1.39
SDR39U1-218ENST00000556262 KCNQ3O43525 872 aa23.74■■□□□ 1.39
SDR39U1-218ENST00000556262 PIP4K2BP78356 416 aa23.74■■□□□ 1.39
SDR39U1-218ENST00000556262 AAMPQ13685 434 aa23.74■■□□□ 1.39
SDR39U1-218ENST00000556262 BTBD11A6QL63 1104 aa23.73■■□□□ 1.39
SDR39U1-218ENST00000556262 SLC4A2P04920 1241 aa23.73■■□□□ 1.39
SDR39U1-218ENST00000556262 LARP1Q6PKG0 1096 aaKnown RBP23.73■■□□□ 1.39
SDR39U1-218ENST00000556262 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.73■■□□□ 1.39
SDR39U1-218ENST00000556262 PHKG2P15735 406 aa23.72■■□□□ 1.39
SDR39U1-218ENST00000556262 NECTIN2Q92692 538 aa23.72■■□□□ 1.39
SDR39U1-218ENST00000556262 EVA1CP58658 441 aa23.72■■□□□ 1.39
SDR39U1-218ENST00000556262 KDM3BQ7LBC6 1761 aa23.71■■□□□ 1.39
SDR39U1-218ENST00000556262 ABCC4O15439 1325 aa23.71■■□□□ 1.39
SDR39U1-218ENST00000556262 OVOS2A0A0G2JMS6 1433 aa23.71■■□□□ 1.39
SDR39U1-218ENST00000556262 CYP27B1O15528 508 aa23.71■■□□□ 1.39
SDR39U1-218ENST00000556262 API5Q9BZZ5 524 aaKnown RBP23.71■■□□□ 1.39
SDR39U1-218ENST00000556262 EIF4A1P60842 406 aaKnown RBP23.7■■□□□ 1.38
SDR39U1-218ENST00000556262 BTG4Q9NY30 223 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms