RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 ZBTB7AO95365 584 aa13.46□□□□□ -0.25
PRKCH-218ENST00000555628 COL24A1Q17RW2 1714 aa13.46□□□□□ -0.25
PRKCH-218ENST00000555628 NHSQ6T4R5 1651 aa13.45□□□□□ -0.26
PRKCH-218ENST00000555628 ABTB2Q8N961 1025 aa13.45□□□□□ -0.26
PRKCH-218ENST00000555628 MARCH10Q8NA82 808 aaPredicted RBP13.45□□□□□ -0.26
PRKCH-218ENST00000555628 TRIM35Q9UPQ4 493 aa13.45□□□□□ -0.26
PRKCH-218ENST00000555628 BRD4O60885 1362 aaPredicted RBP13.45□□□□□ -0.26
PRKCH-218ENST00000555628 TRPM1Q7Z4N2 1603 aa13.44□□□□□ -0.26
PRKCH-218ENST00000555628 PSEN1P49768 467 aa13.44□□□□□ -0.26
PRKCH-218ENST00000555628 STAC3Q96MF2 364 aa13.44□□□□□ -0.26
PRKCH-218ENST00000555628 SYT17Q9BSW7 474 aa13.44□□□□□ -0.26
PRKCH-218ENST00000555628 FHDC1Q9C0D6 1143 aaPredicted RBP13.44□□□□□ -0.26
PRKCH-218ENST00000555628 USP6P35125 1406 aa13.44□□□□□ -0.26
PRKCH-218ENST00000555628 C1QTNF8P60827 252 aa13.43□□□□□ -0.26
PRKCH-218ENST00000555628 PPIP5K1Q6PFW1 1433 aa13.43□□□□□ -0.26
PRKCH-218ENST00000555628 DCAF11Q8TEB1 546 aa13.43□□□□□ -0.26
PRKCH-218ENST00000555628 RGPD5Q99666 1765 aa13.43□□□□□ -0.26
PRKCH-218ENST00000555628 CPSF1Q10570 1443 aaKnown RBP13.42□□□□□ -0.26
PRKCH-218ENST00000555628 POTEB2H3BUK9 544 aa13.42□□□□□ -0.26
PRKCH-218ENST00000555628 ECM2O94769 699 aaPredicted RBP13.42□□□□□ -0.26
PRKCH-218ENST00000555628 DDB1Q16531 1140 aa13.42□□□□□ -0.26
PRKCH-218ENST00000555628 METRNQ9UJH8 293 aa13.42□□□□□ -0.26
PRKCH-218ENST00000555628 RAB3GAP2Q9H2M9 1393 aa13.42□□□□□ -0.26
PRKCH-218ENST00000555628 SHANK3Q9BYB0 1731 aa13.42□□□□□ -0.26
PRKCH-218ENST00000555628 WDR17Q8IZU2 1322 aa13.41□□□□□ -0.26
PRKCH-218ENST00000555628 QRICH2Q9H0J4 1663 aa13.41□□□□□ -0.26
PRKCH-218ENST00000555628 NFAT5O94916 1531 aa13.41□□□□□ -0.26
PRKCH-218ENST00000555628 LHX8Q68G74 356 aa13.41□□□□□ -0.26
PRKCH-218ENST00000555628 NLRP13Q86W25 1043 aa13.41□□□□□ -0.26
PRKCH-218ENST00000555628 SLC39A7Q92504 469 aa13.41□□□□□ -0.26
PRKCH-218ENST00000555628 AXIN2Q9Y2T1 843 aa13.41□□□□□ -0.26
PRKCH-218ENST00000555628 TNS2Q63HR2 1409 aa13.4□□□□□ -0.26
PRKCH-218ENST00000555628 ABCC6O95255 1503 aa13.4□□□□□ -0.26
PRKCH-218ENST00000555628 QSER1Q2KHR3 1735 aa13.4□□□□□ -0.26
PRKCH-218ENST00000555628 SENP3-EIF4A1A0A087X0R7 540 aa13.4□□□□□ -0.26
PRKCH-218ENST00000555628 POTEFA5A3E0 1075 aa13.4□□□□□ -0.26
PRKCH-218ENST00000555628 C7P10643 843 aa13.4□□□□□ -0.26
PRKCH-218ENST00000555628 SLC15A2Q16348 729 aa13.4□□□□□ -0.26
PRKCH-218ENST00000555628 TXNRD1Q16881 649 aa13.4□□□□□ -0.26
PRKCH-218ENST00000555628 MTFR1LQ9H019 292 aa13.4□□□□□ -0.26
PRKCH-218ENST00000555628 KDM2AQ9Y2K7 1162 aa13.4□□□□□ -0.26
PRKCH-218ENST00000555628 IFFO2Q5TF58 517 aa13.39□□□□□ -0.27
PRKCH-218ENST00000555628 PDAP1Q13442 181 aaKnown RBP13.38□□□□□ -0.27
PRKCH-218ENST00000555628 BTAF1O14981 1849 aa13.38□□□□□ -0.27
PRKCH-218ENST00000555628 CDCA7Q9BWT1 371 aaPredicted RBP13.37□□□□□ -0.27
PRKCH-218ENST00000555628 COLQQ9Y215 455 aaPredicted RBP13.37□□□□□ -0.27
PRKCH-218ENST00000555628 USP54Q70EL1 1684 aa13.37□□□□□ -0.27
PRKCH-218ENST00000555628 TUBGCP6Q96RT7 1819 aa13.36□□□□□ -0.27
PRKCH-218ENST00000555628 RIOK3O14730 519 aaKnown RBP13.36□□□□□ -0.27
PRKCH-218ENST00000555628 RGL2O15211 777 aa13.36□□□□□ -0.27
PRKCH-218ENST00000555628 ARHGEF25Q86VW2 580 aa13.36□□□□□ -0.27
PRKCH-218ENST00000555628 CARD10Q9BWT7 1032 aa13.36□□□□□ -0.27
PRKCH-218ENST00000555628 STK32BQ9NY57 414 aa13.36□□□□□ -0.27
PRKCH-218ENST00000555628 TOM1L2Q6ZVM7 507 aa13.35□□□□□ -0.27
PRKCH-218ENST00000555628 NLRP6P59044 892 aa13.33□□□□□ -0.28
PRKCH-218ENST00000555628 ZNF827Q17R98 1081 aa13.33□□□□□ -0.28
PRKCH-218ENST00000555628 NBPF1Q3BBV0 1214 aa13.33□□□□□ -0.28
PRKCH-218ENST00000555628 ARXQ96QS3 562 aa13.33□□□□□ -0.28
PRKCH-218ENST00000555628 CABP2Q9NPB3 220 aa13.33□□□□□ -0.28
PRKCH-218ENST00000555628 CCDC7Q96M83 1385 aa13.32□□□□□ -0.28
PRKCH-218ENST00000555628 POTEJP0CG39 1038 aa13.32□□□□□ -0.28
PRKCH-218ENST00000555628 CENPJQ9HC77 1338 aaPredicted RBP13.32□□□□□ -0.28
PRKCH-218ENST00000555628 LRRC4BQ9NT99 713 aa13.31□□□□□ -0.28
PRKCH-218ENST00000555628 CABP1Q9NZU7 370 aa13.31□□□□□ -0.28
PRKCH-218ENST00000555628 MON2Q7Z3U7 1717 aa13.3□□□□□ -0.28
PRKCH-218ENST00000555628 SRPK2P78362 688 aaKnown RBP13.3□□□□□ -0.28
PRKCH-218ENST00000555628 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.29□□□□□ -0.28
PRKCH-218ENST00000555628 ZFP91Q96JP5 570 aaPredicted RBP13.29□□□□□ -0.28
PRKCH-218ENST00000555628 ZBTB7CA1YPR0 619 aa13.28□□□□□ -0.28
PRKCH-218ENST00000555628 GIGYF1O75420 1035 aaPredicted RBP13.28□□□□□ -0.28
PRKCH-218ENST00000555628 IER5LQ5T953 404 aa13.28□□□□□ -0.28
PRKCH-218ENST00000555628 TTC21BQ7Z4L5 1316 aa13.28□□□□□ -0.28
PRKCH-218ENST00000555628 LY75O60449 1722 aa13.27□□□□□ -0.28
PRKCH-218ENST00000555628 EXOC5O00471 708 aa13.27□□□□□ -0.29
PRKCH-218ENST00000555628 SEC24BO95487 1268 aa13.27□□□□□ -0.29
PRKCH-218ENST00000555628 IRX5P78411 483 aaPredicted RBP13.27□□□□□ -0.29
PRKCH-218ENST00000555628 ERBB3P21860 1342 aa13.27□□□□□ -0.29
PRKCH-218ENST00000555628 PNPLA7Q6ZV29 1317 aa13.27□□□□□ -0.29
PRKCH-218ENST00000555628 LTN1O94822 1766 aa13.27□□□□□ -0.29
PRKCH-218ENST00000555628 KCNH5Q8NCM2 988 aa13.26□□□□□ -0.29
PRKCH-218ENST00000555628 CD163L1Q9NR16 1453 aa13.25□□□□□ -0.29
PRKCH-218ENST00000555628 ADCY9O60503 1353 aa13.25□□□□□ -0.29
PRKCH-218ENST00000555628 NSD2O96028 1365 aa13.25□□□□□ -0.29
PRKCH-218ENST00000555628 USP31Q70CQ4 1352 aa13.25□□□□□ -0.29
PRKCH-218ENST00000555628 TTC21AQ8NDW8 1320 aa13.25□□□□□ -0.29
PRKCH-218ENST00000555628 NLGN2Q8NFZ4 835 aa13.25□□□□□ -0.29
PRKCH-218ENST00000555628 ACSBG1Q96GR2 724 aa13.25□□□□□ -0.29
PRKCH-218ENST00000555628 YBX3P16989 372 aaKnown RBP eCLIP13.24□□□□□ -0.29
PRKCH-218ENST00000555628 SLC16A10Q8TF71 515 aa13.24□□□□□ -0.29
PRKCH-218ENST00000555628 GPR162Q16538 588 aa13.23□□□□□ -0.29
PRKCH-218ENST00000555628 DOT1LQ8TEK3 1739 aa13.22□□□□□ -0.29
PRKCH-218ENST00000555628 FAM208AQ9UK61 1670 aaKnown RBP13.22□□□□□ -0.29
PRKCH-218ENST00000555628 CSB-PGBD3P0DP91 1061 aa13.22□□□□□ -0.29
PRKCH-218ENST00000555628 GOLGA2Q08379 1002 aa13.22□□□□□ -0.29
PRKCH-218ENST00000555628 MKRN3Q13064 507 aaKnown RBP13.22□□□□□ -0.29
PRKCH-218ENST00000555628 ATP10DQ9P241 1426 aa13.22□□□□□ -0.29
PRKCH-218ENST00000555628 SLC27A3Q5K4L6 730 aa13.21□□□□□ -0.29
PRKCH-218ENST00000555628 EFCAB3Q8N7B9 438 aa13.21□□□□□ -0.29
PRKCH-218ENST00000555628 OTUD5Q96G74 571 aa13.21□□□□□ -0.29
PRKCH-218ENST00000555628 SBNO2Q9Y2G9 1366 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms