RNA–Protein interactions for RNA: ENST00000555554.1

CASC1-209, Transcript of cancer susceptibility 1, humanhuman

TSL 3

Gene CASC1, Length 403 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1-209ENST00000555554 RETREG2Q8NC44 543 aa8.64□□□□□ -1.03
CASC1-209ENST00000555554 TRIM34Q9BYJ4 488 aa8.64□□□□□ -1.03
CASC1-209ENST00000555554 PATL2C9JE40 543 aaKnown RBP8.63□□□□□ -1.03
CASC1-209ENST00000555554 HDGFL1Q5TGJ6 251 aa8.63□□□□□ -1.03
CASC1-209ENST00000555554 PBXIP1Q96AQ6 731 aa8.63□□□□□ -1.03
CASC1-209ENST00000555554 AGBL1Q96MI9 1066 aa8.63□□□□□ -1.03
CASC1-209ENST00000555554 FIGNL2A6NMB9 653 aa8.62□□□□□ -1.03
CASC1-209ENST00000555554 SPINT1O43278 529 aa8.62□□□□□ -1.03
CASC1-209ENST00000555554 RAB15P59190 212 aa8.62□□□□□ -1.03
CASC1-209ENST00000555554 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.62□□□□□ -1.03
CASC1-209ENST00000555554 NBPF20Q3BBV1 942 aa8.62□□□□□ -1.03
CASC1-209ENST00000555554 TMPRSS4Q9NRS4 437 aa8.61□□□□□ -1.03
CASC1-209ENST00000555554 FAM181BA6NEQ2 426 aa8.6□□□□□ -1.03
CASC1-209ENST00000555554 RELBQ01201 579 aa8.6□□□□□ -1.03
CASC1-209ENST00000555554 PTSQ03393 145 aa8.6□□□□□ -1.03
CASC1-209ENST00000555554 DZIP3Q86Y13 1208 aaKnown RBP8.6□□□□□ -1.03
CASC1-209ENST00000555554 ZNF784Q8NCA9 323 aaPredicted RBP8.6□□□□□ -1.03
CASC1-209ENST00000555554 GPR37L1O60883 481 aa8.59□□□□□ -1.03
CASC1-209ENST00000555554 USTQ9Y2C2 406 aa8.59□□□□□ -1.03
CASC1-209ENST00000555554 ERVH48-1M5A8F1 160 aa8.58□□□□□ -1.04
CASC1-209ENST00000555554 CTSOP43234 321 aaPredicted RBP8.58□□□□□ -1.04
CASC1-209ENST00000555554 INSM2Q96T92 566 aaPredicted RBP8.58□□□□□ -1.04
CASC1-209ENST00000555554 ALG2Q9H553 416 aa8.58□□□□□ -1.04
CASC1-209ENST00000555554 VAC14Q08AM6 782 aa8.57□□□□□ -1.04
CASC1-209ENST00000555554 AEBP1Q8IUX7 1158 aa8.57□□□□□ -1.04
CASC1-209ENST00000555554 ADAMTS19Q8TE59 1207 aa8.57□□□□□ -1.04
CASC1-209ENST00000555554 PPP1R12CQ9BZL4 782 aa8.57□□□□□ -1.04
CASC1-209ENST00000555554 ZNF395Q9H8N7 513 aaPredicted RBP8.57□□□□□ -1.04
CASC1-209ENST00000555554 ESPNB1AK53 854 aa8.56□□□□□ -1.04
CASC1-209ENST00000555554 LILRA1O75019 489 aa8.56□□□□□ -1.04
CASC1-209ENST00000555554 CSB-PGBD3P0DP91 1061 aa8.56□□□□□ -1.04
CASC1-209ENST00000555554 EIF4G2P78344 907 aaKnown RBP eCLIP8.56□□□□□ -1.04
CASC1-209ENST00000555554 SEMA3FQ13275 785 aa8.56□□□□□ -1.04
CASC1-209ENST00000555554 POLMQ9NP87 494 aaPredicted RBP8.56□□□□□ -1.04
CASC1-209ENST00000555554 ADH1AP07327 375 aa8.55□□□□□ -1.04
CASC1-209ENST00000555554 ADD1P35611 737 aaKnown RBP8.55□□□□□ -1.04
CASC1-209ENST00000555554 CFAP70Q5T0N1 1121 aa8.55□□□□□ -1.04
CASC1-209ENST00000555554 CCDC155Q8N6L0 562 aa8.55□□□□□ -1.04
CASC1-209ENST00000555554 GPR161Q8N6U8 529 aaKnown RBP8.55□□□□□ -1.04
CASC1-209ENST00000555554 FBXO45P0C2W1 286 aa8.54□□□□□ -1.04
CASC1-209ENST00000555554 KRT76Q01546 638 aa8.54□□□□□ -1.04
CASC1-209ENST00000555554 RNF217Q8TC41 542 aa8.54□□□□□ -1.04
CASC1-209ENST00000555554 ZNF592Q92610 1267 aa8.54□□□□□ -1.04
CASC1-209ENST00000555554 SLC35F4A4IF30 521 aa8.53□□□□□ -1.04
CASC1-209ENST00000555554 PALM3A6NDB9 673 aaPredicted RBP8.53□□□□□ -1.04
CASC1-209ENST00000555554 ZBBXA8MT70 800 aa8.53□□□□□ -1.04
CASC1-209ENST00000555554 FOXD4L5Q5VV16 416 aaPredicted RBP8.53□□□□□ -1.04
CASC1-209ENST00000555554 NPM2Q86SE8 214 aaKnown RBP8.53□□□□□ -1.04
CASC1-209ENST00000555554 KDF1Q8NAX2 398 aaPredicted RBP8.53□□□□□ -1.04
CASC1-209ENST00000555554 CYLDQ9NQC7 956 aa8.53□□□□□ -1.04
CASC1-209ENST00000555554 PCDHB9Q9Y5E1 797 aa8.53□□□□□ -1.04
CASC1-209ENST00000555554 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.51□□□□□ -1.05
CASC1-209ENST00000555554 BRD1O95696 1058 aa8.51□□□□□ -1.05
CASC1-209ENST00000555554 RFX1P22670 979 aa8.51□□□□□ -1.05
CASC1-209ENST00000555554 PTGIRP43119 386 aa8.51□□□□□ -1.05
CASC1-209ENST00000555554 KCNA1Q09470 495 aa8.51□□□□□ -1.05
CASC1-209ENST00000555554 NR1H3Q13133 447 aa8.51□□□□□ -1.05
CASC1-209ENST00000555554 SEPT12Q8IYM1 358 aa8.51□□□□□ -1.05
CASC1-209ENST00000555554 CNTNAP3BQ96NU0 1288 aa8.51□□□□□ -1.05
CASC1-209ENST00000555554 CNTNAP3Q9BZ76 1288 aa8.51□□□□□ -1.05
CASC1-209ENST00000555554 SENP3-EIF4A1A0A087X0R7 540 aa8.5□□□□□ -1.05
CASC1-209ENST00000555554 GIGYF1O75420 1035 aaPredicted RBP8.5□□□□□ -1.05
CASC1-209ENST00000555554 ITGA6P23229 1130 aa8.5□□□□□ -1.05
CASC1-209ENST00000555554 LMOD1P29536 600 aaPredicted RBP8.5□□□□□ -1.05
CASC1-209ENST00000555554 SRPK2P78362 688 aaKnown RBP8.5□□□□□ -1.05
CASC1-209ENST00000555554 NANOS1Q8WY41 292 aaKnown RBP8.5□□□□□ -1.05
CASC1-209ENST00000555554 COL25A1Q9BXS0 654 aaPredicted RBP8.49□□□□□ -1.05
CASC1-209ENST00000555554 CDC14CA4D256 554 aa8.48□□□□□ -1.05
CASC1-209ENST00000555554 ATG7O95352 703 aa8.48□□□□□ -1.05
CASC1-209ENST00000555554 RNFT1Q5M7Z0 435 aa8.48□□□□□ -1.05
CASC1-209ENST00000555554 TMCO4Q5TGY1 634 aa8.48□□□□□ -1.05
CASC1-209ENST00000555554 NFATC2IPQ8NCF5 419 aa8.48□□□□□ -1.05
CASC1-209ENST00000555554 UCN2Q96RP3 112 aa8.48□□□□□ -1.05
CASC1-209ENST00000555554 TFIP11Q9UBB9 837 aaKnown RBP8.48□□□□□ -1.05
CASC1-209ENST00000555554 MAFBQ9Y5Q3 323 aaPredicted RBP8.48□□□□□ -1.05
CASC1-209ENST00000555554 ATP9BO43861 1147 aa8.47□□□□□ -1.05
CASC1-209ENST00000555554 VWA5B2Q8N398 1253 aa8.47□□□□□ -1.05
CASC1-209ENST00000555554 MCCD1P59942 119 aaPredicted RBP8.46□□□□□ -1.06
CASC1-209ENST00000555554 B4GALNT3Q6L9W6 998 aa8.46□□□□□ -1.06
CASC1-209ENST00000555554 ATP5J2-PTCD1G3V325 749 aa8.45□□□□□ -1.06
CASC1-209ENST00000555554 SV2AQ7L0J3 742 aa8.45□□□□□ -1.06
CASC1-209ENST00000555554 LYSMD3Q7Z3D4 306 aa8.45□□□□□ -1.06
CASC1-209ENST00000555554 ERVK-9P63128 1117 aa8.44□□□□□ -1.06
CASC1-209ENST00000555554 GZF1Q9H116 711 aaPredicted RBP8.44□□□□□ -1.06
CASC1-209ENST00000555554 RHOQP17081 205 aa8.43□□□□□ -1.06
CASC1-209ENST00000555554 RNF144AP50876 292 aaPredicted RBP8.43□□□□□ -1.06
CASC1-209ENST00000555554 CC2D2BQ6DHV5 1058 aa8.43□□□□□ -1.06
CASC1-209ENST00000555554 PRICKLE2Q7Z3G6 844 aa8.43□□□□□ -1.06
CASC1-209ENST00000555554 VRTNQ9H8Y1 702 aa8.43□□□□□ -1.06
CASC1-209ENST00000555554 CUEDC1Q9NWM3 386 aaPredicted RBP8.43□□□□□ -1.06
CASC1-209ENST00000555554 MEN1O00255 615 aa8.42□□□□□ -1.06
CASC1-209ENST00000555554 SCTRP47872 440 aa8.42□□□□□ -1.06
CASC1-209ENST00000555554 ELOAQ14241 798 aaKnown RBP8.42□□□□□ -1.06
CASC1-209ENST00000555554 RNF20Q5VTR2 975 aa8.42□□□□□ -1.06
CASC1-209ENST00000555554 TBC1D9Q6ZT07 1266 aa8.42□□□□□ -1.06
CASC1-209ENST00000555554 TRIM52Q96A61 297 aa8.42□□□□□ -1.06
CASC1-209ENST00000555554 A0A1W2PRU2 124 aa8.41□□□□□ -1.06
CASC1-209ENST00000555554 ZNF385CQ66K41 422 aaPredicted RBP8.41□□□□□ -1.06
CASC1-209ENST00000555554 PLEKHM2Q8IWE5 1019 aa8.41□□□□□ -1.06
CASC1-209ENST00000555554 PCDHB11Q9Y5F2 797 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms