RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 PHF20L1A8MW92 1017 aa9.85□□□□□ -0.83
SNX6-204ENST00000555541 PTK2Q05397 1052 aa9.85□□□□□ -0.83
SNX6-204ENST00000555541 DBN1Q16643 649 aa9.85□□□□□ -0.83
SNX6-204ENST00000555541 POLR3EQ9NVU0 708 aa9.85□□□□□ -0.83
SNX6-204ENST00000555541 BCRP11274 1271 aa9.84□□□□□ -0.83
SNX6-204ENST00000555541 BEND7Q8N7W2 519 aaPredicted RBP9.84□□□□□ -0.83
SNX6-204ENST00000555541 GPR25O00155 361 aa9.83□□□□□ -0.84
SNX6-204ENST00000555541 NBPF20Q3BBV1 942 aa9.83□□□□□ -0.84
SNX6-204ENST00000555541 LRRC4BQ9NT99 713 aa9.83□□□□□ -0.84
SNX6-204ENST00000555541 RHOQP17081 205 aa9.82□□□□□ -0.84
SNX6-204ENST00000555541 PRICKLE2Q7Z3G6 844 aa9.82□□□□□ -0.84
SNX6-204ENST00000555541 EPS8L1Q8TE68 723 aa9.81□□□□□ -0.84
SNX6-204ENST00000555541 RSPH6AQ9H0K4 717 aa9.81□□□□□ -0.84
SNX6-204ENST00000555541 PPP2R2DQ66LE6 453 aa9.8□□□□□ -0.84
SNX6-204ENST00000555541 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.79□□□□□ -0.84
SNX6-204ENST00000555541 RAB15P59190 212 aa9.78□□□□□ -0.84
SNX6-204ENST00000555541 KRBA1A5PL33 1030 aa9.77□□□□□ -0.85
SNX6-204ENST00000555541 GPC1P35052 558 aa9.77□□□□□ -0.85
SNX6-204ENST00000555541 GTPBP3Q969Y2 492 aaKnown RBP9.77□□□□□ -0.85
SNX6-204ENST00000555541 DYRK1BQ9Y463 629 aa9.77□□□□□ -0.85
SNX6-204ENST00000555541 SKIV2LQ15477 1246 aaKnown RBP9.76□□□□□ -0.85
SNX6-204ENST00000555541 SEPT12Q8IYM1 358 aa9.76□□□□□ -0.85
SNX6-204ENST00000555541 PROCA1Q8NCQ7 364 aaPredicted RBP9.76□□□□□ -0.85
SNX6-204ENST00000555541 GPBP1L1Q9HC44 474 aaPredicted RBP9.76□□□□□ -0.85
SNX6-204ENST00000555541 HMX1Q9NP08 348 aaPredicted RBP9.76□□□□□ -0.85
SNX6-204ENST00000555541 CYLDQ9NQC7 956 aa9.76□□□□□ -0.85
SNX6-204ENST00000555541 OIP5O43482 229 aa9.75□□□□□ -0.85
SNX6-204ENST00000555541 THBS1P07996 1170 aa9.75□□□□□ -0.85
SNX6-204ENST00000555541 SNRPNP63162 240 aaKnown RBP9.75□□□□□ -0.85
SNX6-204ENST00000555541 NEDD1Q8NHV4 660 aa9.75□□□□□ -0.85
SNX6-204ENST00000555541 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.74□□□□□ -0.85
SNX6-204ENST00000555541 K7ELQ4 463 aaPredicted RBP9.74□□□□□ -0.85
SNX6-204ENST00000555541 PODNQ7Z5L7 613 aa9.74□□□□□ -0.85
SNX6-204ENST00000555541 FAM117AQ9C073 453 aa9.74□□□□□ -0.85
SNX6-204ENST00000555541 BAG6P46379 1132 aa9.73□□□□□ -0.85
SNX6-204ENST00000555541 SH3D19Q5HYK7 790 aa9.73□□□□□ -0.85
SNX6-204ENST00000555541 FOXR1Q6PIV2 292 aa9.73□□□□□ -0.85
SNX6-204ENST00000555541 DZIP3Q86Y13 1208 aaKnown RBP9.73□□□□□ -0.85
SNX6-204ENST00000555541 KRTAP9-2Q9BYQ4 174 aa9.73□□□□□ -0.85
SNX6-204ENST00000555541 KDM4CQ9H3R0 1056 aa9.73□□□□□ -0.85
SNX6-204ENST00000555541 ATP5J2-PTCD1G3V325 749 aa9.72□□□□□ -0.85
SNX6-204ENST00000555541 COL8A1P27658 744 aa9.72□□□□□ -0.85
SNX6-204ENST00000555541 RIPOR1Q6ZS17 1223 aa9.72□□□□□ -0.85
SNX6-204ENST00000555541 C1orf229Q6ZS94 237 aaPredicted RBP9.72□□□□□ -0.85
SNX6-204ENST00000555541 Q8N3U1 123 aa9.72□□□□□ -0.85
SNX6-204ENST00000555541 GRIP2Q9C0E4 1043 aa9.72□□□□□ -0.85
SNX6-204ENST00000555541 A0A1W2PRU2 124 aa9.71□□□□□ -0.86
SNX6-204ENST00000555541 H7C1W4 665 aa9.71□□□□□ -0.86
SNX6-204ENST00000555541 HOXB4P17483 251 aaPredicted RBP9.71□□□□□ -0.86
SNX6-204ENST00000555541 POU4F2Q12837 409 aa9.71□□□□□ -0.86
SNX6-204ENST00000555541 GALNT6Q8NCL4 622 aa9.71□□□□□ -0.86
SNX6-204ENST00000555541 SHISA8B8ZZ34 492 aa9.7□□□□□ -0.86
SNX6-204ENST00000555541 SPATA31C2B4DYI2 1134 aa9.69□□□□□ -0.86
SNX6-204ENST00000555541 MX2P20592 715 aa9.69□□□□□ -0.86
SNX6-204ENST00000555541 NBPF10Q6P3W6 841 aaKnown RBP9.69□□□□□ -0.86
SNX6-204ENST00000555541 NBPF15Q8N660 670 aa9.69□□□□□ -0.86
SNX6-204ENST00000555541 GIGYF1O75420 1035 aaPredicted RBP9.68□□□□□ -0.86
SNX6-204ENST00000555541 ERVK-9P63128 1117 aa9.68□□□□□ -0.86
SNX6-204ENST00000555541 WDR44Q5JSH3 913 aa9.68□□□□□ -0.86
SNX6-204ENST00000555541 TRERF1Q96PN7 1200 aa9.68□□□□□ -0.86
SNX6-204ENST00000555541 KRTAP9-6A0A140TA67 174 aa9.67□□□□□ -0.86
SNX6-204ENST00000555541 AP1G2O75843 785 aa9.67□□□□□ -0.86
SNX6-204ENST00000555541 UBAP2LQ14157 1087 aaKnown RBP9.67□□□□□ -0.86
SNX6-204ENST00000555541 OXCT2Q9BYC2 517 aaPredicted RBP9.67□□□□□ -0.86
SNX6-204ENST00000555541 TRIM34Q9BYJ4 488 aa9.67□□□□□ -0.86
SNX6-204ENST00000555541 MEN1O00255 615 aa9.66□□□□□ -0.86
SNX6-204ENST00000555541 USP17L8P0C7I0 530 aa9.66□□□□□ -0.86
SNX6-204ENST00000555541 DDRGK1Q96HY6 314 aa9.66□□□□□ -0.86
SNX6-204ENST00000555541 GAS2L1Q99501 681 aaPredicted RBP9.66□□□□□ -0.86
SNX6-204ENST00000555541 CLN3Q13286 438 aa9.65□□□□□ -0.86
SNX6-204ENST00000555541 ALYREFQ86V81 257 aaKnown RBP9.65□□□□□ -0.86
SNX6-204ENST00000555541 CFHR5Q9BXR6 569 aa9.65□□□□□ -0.86
SNX6-204ENST00000555541 F11P03951 625 aa9.64□□□□□ -0.87
SNX6-204ENST00000555541 FURINP09958 794 aa9.64□□□□□ -0.87
SNX6-204ENST00000555541 ITGB7P26010 798 aa9.64□□□□□ -0.87
SNX6-204ENST00000555541 MAP2K3P46734 347 aa9.64□□□□□ -0.87
SNX6-204ENST00000555541 LINC00114Q6XXX2 140 aa9.64□□□□□ -0.87
SNX6-204ENST00000555541 KLRG1Q96E93 195 aa9.64□□□□□ -0.87
SNX6-204ENST00000555541 PSMG3-AS1Q96PY0 264 aa9.64□□□□□ -0.87
SNX6-204ENST00000555541 NUCKS1Q9H1E3 243 aaKnown RBP9.64□□□□□ -0.87
SNX6-204ENST00000555541 NSFL1CQ9UNZ2 370 aaKnown RBP9.63□□□□□ -0.87
SNX6-204ENST00000555541 TRAK2O60296 914 aa9.62□□□□□ -0.87
SNX6-204ENST00000555541 SCTRP47872 440 aa9.62□□□□□ -0.87
SNX6-204ENST00000555541 CC2D2BQ6DHV5 1058 aa9.62□□□□□ -0.87
SNX6-204ENST00000555541 PNMA1Q8ND90 353 aa9.62□□□□□ -0.87
SNX6-204ENST00000555541 MKL2Q9ULH7 1088 aa9.62□□□□□ -0.87
SNX6-204ENST00000555541 SUV39H2Q9H5I1 410 aa9.61□□□□□ -0.87
SNX6-204ENST00000555541 WASLO00401 505 aaPredicted RBP9.6□□□□□ -0.87
SNX6-204ENST00000555541 SLC27A3Q5K4L6 730 aa9.6□□□□□ -0.87
SNX6-204ENST00000555541 CCDC125Q86Z20 511 aa9.6□□□□□ -0.87
SNX6-204ENST00000555541 TRIM52Q96A61 297 aa9.6□□□□□ -0.87
SNX6-204ENST00000555541 OSBPL3Q9H4L5 887 aa9.6□□□□□ -0.87
SNX6-204ENST00000555541 TIMMDC1Q9NPL8 285 aa9.6□□□□□ -0.87
SNX6-204ENST00000555541 TAS1R3Q7RTX0 852 aa9.59□□□□□ -0.87
SNX6-204ENST00000555541 HRH3Q9Y5N1 445 aa9.59□□□□□ -0.87
SNX6-204ENST00000555541 FBXO45P0C2W1 286 aa9.58□□□□□ -0.88
SNX6-204ENST00000555541 EDARADDQ8WWZ3 215 aa9.58□□□□□ -0.88
SNX6-204ENST00000555541 NLRP3Q96P20 1036 aa9.58□□□□□ -0.88
SNX6-204ENST00000555541 ZBBXA8MT70 800 aa9.57□□□□□ -0.88
SNX6-204ENST00000555541 C2CD2LO14523 706 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms