RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 INSM2Q96T92 566 aaPredicted RBP6.07□□□□□ -1.44
SLIRP-202ENST00000553981 CNTNAP3Q9BZ76 1288 aa6.07□□□□□ -1.44
SLIRP-202ENST00000553981 TMPRSS4Q9NRS4 437 aa6.07□□□□□ -1.44
SLIRP-202ENST00000553981 IFT140Q96RY7 1462 aa6.07□□□□□ -1.44
SLIRP-202ENST00000553981 NBPF20Q3BBV1 942 aa6.06□□□□□ -1.44
SLIRP-202ENST00000553981 ZNF784Q8NCA9 323 aaPredicted RBP6.06□□□□□ -1.44
SLIRP-202ENST00000553981 COL25A1Q9BXS0 654 aaPredicted RBP6.06□□□□□ -1.44
SLIRP-202ENST00000553981 ZNF395Q9H8N7 513 aaPredicted RBP6.06□□□□□ -1.44
SLIRP-202ENST00000553981 RAD54L2Q9Y4B4 1467 aa6.06□□□□□ -1.44
SLIRP-202ENST00000553981 ERVH48-1M5A8F1 160 aa6.05□□□□□ -1.44
SLIRP-202ENST00000553981 RAB15P59190 212 aa6.05□□□□□ -1.44
SLIRP-202ENST00000553981 KCNMA1Q12791 1236 aa6.05□□□□□ -1.44
SLIRP-202ENST00000553981 POLMQ9NP87 494 aaPredicted RBP6.05□□□□□ -1.44
SLIRP-202ENST00000553981 ESPNB1AK53 854 aa6.04□□□□□ -1.44
SLIRP-202ENST00000553981 LILRA1O75019 489 aa6.04□□□□□ -1.44
SLIRP-202ENST00000553981 ADH1AP07327 375 aa6.04□□□□□ -1.44
SLIRP-202ENST00000553981 ITGA6P23229 1130 aa6.04□□□□□ -1.44
SLIRP-202ENST00000553981 ADD1P35611 737 aaKnown RBP6.04□□□□□ -1.44
SLIRP-202ENST00000553981 RFC5P40937 340 aa6.04□□□□□ -1.44
SLIRP-202ENST00000553981 GSK3AP49840 483 aa6.04□□□□□ -1.44
SLIRP-202ENST00000553981 RNFT1Q5M7Z0 435 aa6.04□□□□□ -1.44
SLIRP-202ENST00000553981 DZIP3Q86Y13 1208 aaKnown RBP6.04□□□□□ -1.44
SLIRP-202ENST00000553981 PNMA1Q8ND90 353 aa6.04□□□□□ -1.44
SLIRP-202ENST00000553981 RNF217Q8TC41 542 aa6.04□□□□□ -1.44
SLIRP-202ENST00000553981 POLA1P09884 1462 aaPredicted RBP6.03□□□□□ -1.44
SLIRP-202ENST00000553981 DNMBPQ6XZF7 1577 aa6.03□□□□□ -1.44
SLIRP-202ENST00000553981 SENP3-EIF4A1A0A087X0R7 540 aa6.03□□□□□ -1.44
SLIRP-202ENST00000553981 CDC14CA4D256 554 aa6.03□□□□□ -1.44
SLIRP-202ENST00000553981 FOXD4L5Q5VV16 416 aaPredicted RBP6.03□□□□□ -1.44
SLIRP-202ENST00000553981 VWA5B2Q8N398 1253 aa6.03□□□□□ -1.44
SLIRP-202ENST00000553981 KDF1Q8NAX2 398 aaPredicted RBP6.03□□□□□ -1.44
SLIRP-202ENST00000553981 PTGIRP43119 386 aa6.02□□□□□ -1.45
SLIRP-202ENST00000553981 SV2AQ7L0J3 742 aa6.02□□□□□ -1.45
SLIRP-202ENST00000553981 TRIM34Q9BYJ4 488 aa6.02□□□□□ -1.45
SLIRP-202ENST00000553981 ADAMTS8Q9UP79 889 aa6.02□□□□□ -1.45
SLIRP-202ENST00000553981 TDRD9Q8NDG6 1382 aaKnown RBP6.02□□□□□ -1.45
SLIRP-202ENST00000553981 CLASP1Q7Z460 1538 aa6.01□□□□□ -1.45
SLIRP-202ENST00000553981 ZNF385CQ66K41 422 aaPredicted RBP6.01□□□□□ -1.45
SLIRP-202ENST00000553981 SLURP2P0DP57 97 aa6□□□□□ -1.45
SLIRP-202ENST00000553981 SEPT12Q8IYM1 358 aa6□□□□□ -1.45
SLIRP-202ENST00000553981 SVOPQ8N4V2 548 aa6□□□□□ -1.45
SLIRP-202ENST00000553981 WHAMMQ8TF30 809 aa6□□□□□ -1.45
SLIRP-202ENST00000553981 SNAPC4Q5SXM2 1469 aa5.99□□□□□ -1.45
SLIRP-202ENST00000553981 BCANQ96GW7 911 aa5.99□□□□□ -1.45
SLIRP-202ENST00000553981 GOPCQ9HD26 462 aa5.99□□□□□ -1.45
SLIRP-202ENST00000553981 CYLDQ9NQC7 956 aa5.99□□□□□ -1.45
SLIRP-202ENST00000553981 CUX1P39880 1505 aa5.99□□□□□ -1.45
SLIRP-202ENST00000553981 ERCC6L2Q5T890 1561 aa5.98□□□□□ -1.45
SLIRP-202ENST00000553981 RASSF7Q02833 373 aa5.98□□□□□ -1.45
SLIRP-202ENST00000553981 TMEM259Q4ZIN3 620 aa5.98□□□□□ -1.45
SLIRP-202ENST00000553981 LYSMD3Q7Z3D4 306 aa5.98□□□□□ -1.45
SLIRP-202ENST00000553981 KCTD17Q8N5Z5 321 aa5.98□□□□□ -1.45
SLIRP-202ENST00000553981 GJD4Q96KN9 370 aaPredicted RBP5.98□□□□□ -1.45
SLIRP-202ENST00000553981 PCMTD1Q96MG8 357 aaPredicted RBP5.98□□□□□ -1.45
SLIRP-202ENST00000553981 CUEDC1Q9NWM3 386 aaPredicted RBP5.98□□□□□ -1.45
SLIRP-202ENST00000553981 FGD5Q6ZNL6 1462 aa5.97□□□□□ -1.45
SLIRP-202ENST00000553981 ZBBXA8MT70 800 aa5.97□□□□□ -1.45
SLIRP-202ENST00000553981 RNF225M0QZC1 329 aaPredicted RBP5.97□□□□□ -1.45
SLIRP-202ENST00000553981 GIGYF1O75420 1035 aaPredicted RBP5.97□□□□□ -1.45
SLIRP-202ENST00000553981 ARHGEF15O94989 841 aa5.97□□□□□ -1.45
SLIRP-202ENST00000553981 GDF11O95390 407 aa5.97□□□□□ -1.45
SLIRP-202ENST00000553981 FBXO45P0C2W1 286 aa5.97□□□□□ -1.45
SLIRP-202ENST00000553981 RNF144AP50876 292 aaPredicted RBP5.97□□□□□ -1.45
SLIRP-202ENST00000553981 PRICKLE2Q7Z3G6 844 aa5.97□□□□□ -1.45
SLIRP-202ENST00000553981 TMEM151AQ8N4L1 468 aa5.97□□□□□ -1.45
SLIRP-202ENST00000553981 PCDHB9Q9Y5E1 797 aa5.97□□□□□ -1.45
SLIRP-202ENST00000553981 SOGA1O94964 1423 aa5.97□□□□□ -1.45
SLIRP-202ENST00000553981 WDR97A6NE52 1622 aa5.96□□□□□ -1.45
SLIRP-202ENST00000553981 ATP5J2-PTCD1G3V325 749 aa5.96□□□□□ -1.46
SLIRP-202ENST00000553981 ADAMTS2O95450 1211 aa5.96□□□□□ -1.46
SLIRP-202ENST00000553981 RHOQP17081 205 aa5.96□□□□□ -1.46
SLIRP-202ENST00000553981 GAS6Q14393 721 aa5.96□□□□□ -1.46
SLIRP-202ENST00000553981 ABCC8Q09428 1581 aa5.96□□□□□ -1.46
SLIRP-202ENST00000553981 TRIM52Q96A61 297 aa5.95□□□□□ -1.46
SLIRP-202ENST00000553981 LOC100996750A0A140TA64 210 aa5.94□□□□□ -1.46
SLIRP-202ENST00000553981 GPC1P35052 558 aa5.94□□□□□ -1.46
SLIRP-202ENST00000553981 ERVK-9P63128 1117 aa5.94□□□□□ -1.46
SLIRP-202ENST00000553981 SRSF11Q05519 484 aaKnown RBP5.94□□□□□ -1.46
SLIRP-202ENST00000553981 LYPD4Q6UWN0 246 aa5.94□□□□□ -1.46
SLIRP-202ENST00000553981 KRTAP4-6Q9BYQ5 205 aa5.94□□□□□ -1.46
SLIRP-202ENST00000553981 A0A1W2PRU2 124 aa5.93□□□□□ -1.46
SLIRP-202ENST00000553981 MEN1O00255 615 aa5.93□□□□□ -1.46
SLIRP-202ENST00000553981 CC2D2BQ6DHV5 1058 aa5.93□□□□□ -1.46
SLIRP-202ENST00000553981 IL27Q8NEV9 243 aa5.93□□□□□ -1.46
SLIRP-202ENST00000553981 ZNF837Q96EG3 531 aaPredicted RBP5.93□□□□□ -1.46
SLIRP-202ENST00000553981 IRS1P35568 1242 aa5.92□□□□□ -1.46
SLIRP-202ENST00000553981 MARSP56192 900 aaKnown RBP5.92□□□□□ -1.46
SLIRP-202ENST00000553981 SUZ12Q15022 739 aaKnown RBP5.92□□□□□ -1.46
SLIRP-202ENST00000553981 NEUROD2Q15784 382 aa5.92□□□□□ -1.46
SLIRP-202ENST00000553981 CCDC125Q86Z20 511 aa5.92□□□□□ -1.46
SLIRP-202ENST00000553981 TRIM22Q8IYM9 498 aa5.92□□□□□ -1.46
SLIRP-202ENST00000553981 GMCL1Q96IK5 515 aa5.92□□□□□ -1.46
SLIRP-202ENST00000553981 PBRM1Q86U86 1689 aa5.91□□□□□ -1.46
SLIRP-202ENST00000553981 GAPVD1Q14C86 1478 aa5.91□□□□□ -1.46
SLIRP-202ENST00000553981 GPR25O00155 361 aa5.91□□□□□ -1.46
SLIRP-202ENST00000553981 GPR37L1O60883 481 aa5.91□□□□□ -1.46
SLIRP-202ENST00000553981 CELA2BP08218 269 aaPredicted RBP5.91□□□□□ -1.46
SLIRP-202ENST00000553981 SCTRP47872 440 aa5.91□□□□□ -1.46
SLIRP-202ENST00000553981 POU4F2Q12837 409 aa5.91□□□□□ -1.46
SLIRP-202ENST00000553981 NR1H3Q13133 447 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms