RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 PNISRQ8TF01 805 aaKnown RBP19.87■□□□□ 0.77
MTHFD1-204ENST00000553405 U2AF1L5P0DN76 240 aaPredicted RBP19.86■□□□□ 0.77
MTHFD1-204ENST00000553405 U2AF1Q01081 240 aaKnown RBP eCLIP19.86■□□□□ 0.77
MTHFD1-204ENST00000553405 ILDR2Q71H61 639 aa19.86■□□□□ 0.77
MTHFD1-204ENST00000553405 RAPGEF4Q8WZA2 1011 aa19.86■□□□□ 0.77
MTHFD1-204ENST00000553405 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.86■□□□□ 0.77
MTHFD1-204ENST00000553405 CCER2I3L3R5 266 aa19.85■□□□□ 0.77
MTHFD1-204ENST00000553405 FCHSD2O94868 740 aa19.85■□□□□ 0.77
MTHFD1-204ENST00000553405 TATP17735 454 aaPredicted RBP19.85■□□□□ 0.77
MTHFD1-204ENST00000553405 DDB1Q16531 1140 aa19.85■□□□□ 0.77
MTHFD1-204ENST00000553405 PLEKHF1Q96S99 279 aa19.85■□□□□ 0.77
MTHFD1-204ENST00000553405 MRS2Q9HD23 443 aa19.85■□□□□ 0.77
MTHFD1-204ENST00000553405 MARCH10Q8NA82 808 aaPredicted RBP19.84■□□□□ 0.77
MTHFD1-204ENST00000553405 CYP27B1O15528 508 aa19.83■□□□□ 0.77
MTHFD1-204ENST00000553405 ZCRB1Q8TBF4 217 aaKnown RBP19.83■□□□□ 0.77
MTHFD1-204ENST00000553405 PHACTR3Q96KR7 559 aa19.83■□□□□ 0.77
MTHFD1-204ENST00000553405 ADAMTS8Q9UP79 889 aa19.83■□□□□ 0.77
MTHFD1-204ENST00000553405 BCL9O00512 1426 aa19.83■□□□□ 0.76
MTHFD1-204ENST00000553405 EXOC5O00471 708 aa19.82■□□□□ 0.76
MTHFD1-204ENST00000553405 PRKAR2BP31323 418 aa19.82■□□□□ 0.76
MTHFD1-204ENST00000553405 KRT27Q7Z3Y8 459 aa19.81■□□□□ 0.76
MTHFD1-204ENST00000553405 ADAMTS7Q9UKP4 1686 aa19.8■□□□□ 0.76
MTHFD1-204ENST00000553405 A0A0G2JS52 829 aa19.79■□□□□ 0.76
MTHFD1-204ENST00000553405 MYT1Q01538 1121 aa19.79■□□□□ 0.76
MTHFD1-204ENST00000553405 MTHFSDQ2M296 383 aaKnown RBP19.79■□□□□ 0.76
MTHFD1-204ENST00000553405 TOGARAM1Q9Y4F4 1720 aa19.79■□□□□ 0.76
MTHFD1-204ENST00000553405 PCDH11XQ9BZA7 1347 aa19.78■□□□□ 0.76
MTHFD1-204ENST00000553405 PCDH11YQ9BZA8 1340 aa19.78■□□□□ 0.76
MTHFD1-204ENST00000553405 AMOTQ4VCS5 1084 aa19.78■□□□□ 0.76
MTHFD1-204ENST00000553405 FAM182BQ5T319 152 aa19.78■□□□□ 0.76
MTHFD1-204ENST00000553405 SBF2Q86WG5 1849 aa19.77■□□□□ 0.76
MTHFD1-204ENST00000553405 PHKG2P15735 406 aa19.77■□□□□ 0.76
MTHFD1-204ENST00000553405 PDE3BQ13370 1112 aa19.77■□□□□ 0.76
MTHFD1-204ENST00000553405 WDR43Q15061 677 aaKnown RBP eCLIP19.77■□□□□ 0.76
MTHFD1-204ENST00000553405 NKX1-1Q15270 411 aaPredicted RBP19.77■□□□□ 0.76
MTHFD1-204ENST00000553405 PLEKHO1Q53GL0 409 aaPredicted RBP19.77■□□□□ 0.76
MTHFD1-204ENST00000553405 SPG7Q9UQ90 795 aa19.77■□□□□ 0.76
MTHFD1-204ENST00000553405 KDM6AO15550 1401 aaPredicted RBP19.76■□□□□ 0.75
MTHFD1-204ENST00000553405 DDX54Q8TDD1 881 aaKnown RBP19.75■□□□□ 0.75
MTHFD1-204ENST00000553405 ZNF530Q6P9A1 599 aaPredicted RBP19.74■□□□□ 0.75
MTHFD1-204ENST00000553405 DOT1LQ8TEK3 1739 aa19.73■□□□□ 0.75
MTHFD1-204ENST00000553405 DLG5Q8TDM6 1919 aa19.73■□□□□ 0.75
MTHFD1-204ENST00000553405 NHSQ6T4R5 1651 aa19.73■□□□□ 0.75
MTHFD1-204ENST00000553405 IFNL2Q8IZJ0 200 aa19.73■□□□□ 0.75
MTHFD1-204ENST00000553405 CCDC146Q8IYE0 955 aa19.72■□□□□ 0.75
MTHFD1-204ENST00000553405 RUNDC1Q96C34 613 aa19.72■□□□□ 0.75
MTHFD1-204ENST00000553405 SCN11AQ9UI33 1791 aa19.72■□□□□ 0.75
MTHFD1-204ENST00000553405 AKAP4Q5JQC9 854 aa19.71■□□□□ 0.75
MTHFD1-204ENST00000553405 FAM196AQ6ZSG2 479 aa19.71■□□□□ 0.75
MTHFD1-204ENST00000553405 GAS2L2Q8NHY3 880 aa19.71■□□□□ 0.75
MTHFD1-204ENST00000553405 VIRMAQ69YN4 1812 aaKnown RBP19.71■□□□□ 0.75
MTHFD1-204ENST00000553405 TNS1Q9HBL0 1735 aaKnown RBP19.71■□□□□ 0.75
MTHFD1-204ENST00000553405 PTF1AQ7RTS3 328 aa19.7■□□□□ 0.74
MTHFD1-204ENST00000553405 MRC1P22897 1456 aa19.7■□□□□ 0.74
MTHFD1-204ENST00000553405 MAP3K5Q99683 1374 aa19.7■□□□□ 0.74
MTHFD1-204ENST00000553405 NFE2L2Q16236 605 aa19.69■□□□□ 0.74
MTHFD1-204ENST00000553405 PNNQ9H307 717 aaKnown RBP19.69■□□□□ 0.74
MTHFD1-204ENST00000553405 ITGB4P16144 1822 aa19.69■□□□□ 0.74
MTHFD1-204ENST00000553405 CEMIPQ8WUJ3 1361 aa19.69■□□□□ 0.74
MTHFD1-204ENST00000553405 KCNQ2O43526 872 aa19.67■□□□□ 0.74
MTHFD1-204ENST00000553405 TMPOP42166 694 aaKnown RBP19.67■□□□□ 0.74
MTHFD1-204ENST00000553405 MPRIPQ6WCQ1 1025 aa19.67■□□□□ 0.74
MTHFD1-204ENST00000553405 FAM9BQ8IZU0 186 aa19.67■□□□□ 0.74
MTHFD1-204ENST00000553405 IL17REQ8NFR9 667 aa19.67■□□□□ 0.74
MTHFD1-204ENST00000553405 DCAF5Q96JK2 942 aa19.67■□□□□ 0.74
MTHFD1-204ENST00000553405 LGR6Q9HBX8 967 aa19.67■□□□□ 0.74
MTHFD1-204ENST00000553405 MAPK8IP3Q9UPT6 1336 aa19.67■□□□□ 0.74
MTHFD1-204ENST00000553405 SIPA1L3O60292 1781 aaPredicted RBP19.67■□□□□ 0.74
MTHFD1-204ENST00000553405 C1orf141Q5JVX7 400 aa19.66■□□□□ 0.74
MTHFD1-204ENST00000553405 GNAT3A8MTJ3 354 aa19.65■□□□□ 0.74
MTHFD1-204ENST00000553405 APAF1O14727 1248 aa19.65■□□□□ 0.74
MTHFD1-204ENST00000553405 HSP90AB1P08238 724 aaKnown RBP19.65■□□□□ 0.74
MTHFD1-204ENST00000553405 BTAF1O14981 1849 aa19.65■□□□□ 0.74
MTHFD1-204ENST00000553405 RNMTO43148 476 aaKnown RBP19.64■□□□□ 0.73
MTHFD1-204ENST00000553405 HTATSF1O43719 755 aaKnown RBP19.64■□□□□ 0.73
MTHFD1-204ENST00000553405 TRIM35Q9UPQ4 493 aa19.64■□□□□ 0.73
MTHFD1-204ENST00000553405 ERVV-2B6SEH9 535 aa19.63■□□□□ 0.73
MTHFD1-204ENST00000553405 PRIM1P49642 420 aaKnown RBP19.63■□□□□ 0.73
MTHFD1-204ENST00000553405 ACSBG1Q96GR2 724 aa19.63■□□□□ 0.73
MTHFD1-204ENST00000553405 BCL11BQ9C0K0 894 aaPredicted RBP19.63■□□□□ 0.73
MTHFD1-204ENST00000553405 RRP7AQ9Y3A4 280 aaKnown RBP19.63■□□□□ 0.73
MTHFD1-204ENST00000553405 TRIM37O94972 964 aa19.62■□□□□ 0.73
MTHFD1-204ENST00000553405 UPF1Q92900 1129 aaKnown RBP eCLIP19.62■□□□□ 0.73
MTHFD1-204ENST00000553405 PAPPAQ13219 1627 aa19.62■□□□□ 0.73
MTHFD1-204ENST00000553405 RIPK4P57078 832 aa19.61■□□□□ 0.73
MTHFD1-204ENST00000553405 DCTN1Q14203 1278 aa19.61■□□□□ 0.73
MTHFD1-204ENST00000553405 NCBP3Q53F19 620 aaKnown RBP19.61■□□□□ 0.73
MTHFD1-204ENST00000553405 NEFMP07197 916 aa19.6■□□□□ 0.73
MTHFD1-204ENST00000553405 MCM10Q7L590 875 aa19.6■□□□□ 0.73
MTHFD1-204ENST00000553405 PIGBQ92521 554 aa19.6■□□□□ 0.73
MTHFD1-204ENST00000553405 SLC52A2Q9HAB3 445 aa19.59■□□□□ 0.73
MTHFD1-204ENST00000553405 RGPD3A6NKT7 1758 aaPredicted RBP19.59■□□□□ 0.73
MTHFD1-204ENST00000553405 RGPD4Q7Z3J3 1758 aa19.59■□□□□ 0.73
MTHFD1-204ENST00000553405 THUMPD2Q9BTF0 503 aaKnown RBP19.58■□□□□ 0.72
MTHFD1-204ENST00000553405 KAT6BQ8WYB5 2073 aa19.58■□□□□ 0.72
MTHFD1-204ENST00000553405 CCDC27Q2M243 656 aa19.57■□□□□ 0.72
MTHFD1-204ENST00000553405 NFATC2IPQ8NCF5 419 aa19.57■□□□□ 0.72
MTHFD1-204ENST00000553405 LY75O60449 1722 aa19.56■□□□□ 0.72
MTHFD1-204ENST00000553405 SENP3-EIF4A1A0A087X0R7 540 aa19.56■□□□□ 0.72
MTHFD1-204ENST00000553405 NEUROD2Q15784 382 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms