RNA–Protein interactions for RNA: ENST00000552343.1

HCFC2-206, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 992 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-206ENST00000552343 PHF20L1A8MW92 1017 aa8.52□□□□□ -1.05
HCFC2-206ENST00000552343 RSPH6AQ9H0K4 717 aa8.52□□□□□ -1.05
HCFC2-206ENST00000552343 MBIPQ9NS73 344 aa8.52□□□□□ -1.05
HCFC2-206ENST00000552343 KRTAP9-6A0A140TA67 174 aa8.51□□□□□ -1.05
HCFC2-206ENST00000552343 ERVH48-1M5A8F1 160 aa8.51□□□□□ -1.05
HCFC2-206ENST00000552343 GPR25O00155 361 aa8.51□□□□□ -1.05
HCFC2-206ENST00000552343 RHOQP17081 205 aa8.51□□□□□ -1.05
HCFC2-206ENST00000552343 BRPF1P55201 1214 aaPredicted RBP8.51□□□□□ -1.05
HCFC2-206ENST00000552343 NBPF20Q3BBV1 942 aa8.51□□□□□ -1.05
HCFC2-206ENST00000552343 PRICKLE2Q7Z3G6 844 aa8.51□□□□□ -1.05
HCFC2-206ENST00000552343 ZNF837Q96EG3 531 aaPredicted RBP8.51□□□□□ -1.05
HCFC2-206ENST00000552343 GPSM3Q9Y4H4 160 aa8.51□□□□□ -1.05
HCFC2-206ENST00000552343 IGF1RP08069 1367 aa8.5□□□□□ -1.05
HCFC2-206ENST00000552343 BEND7Q8N7W2 519 aaPredicted RBP8.5□□□□□ -1.05
HCFC2-206ENST00000552343 FBXO31Q5XUX0 539 aaPredicted RBP8.49□□□□□ -1.05
HCFC2-206ENST00000552343 TRIM22Q8IYM9 498 aa8.49□□□□□ -1.05
HCFC2-206ENST00000552343 NEDD1Q8NHV4 660 aa8.49□□□□□ -1.05
HCFC2-206ENST00000552343 PROCP04070 461 aa8.48□□□□□ -1.05
HCFC2-206ENST00000552343 BCRP11274 1271 aa8.48□□□□□ -1.05
HCFC2-206ENST00000552343 RNF144AP50876 292 aaPredicted RBP8.48□□□□□ -1.05
HCFC2-206ENST00000552343 DBN1Q16643 649 aa8.48□□□□□ -1.05
HCFC2-206ENST00000552343 GMCL1Q96IK5 515 aa8.48□□□□□ -1.05
HCFC2-206ENST00000552343 PSMG3-AS1Q96PY0 264 aa8.48□□□□□ -1.05
HCFC2-206ENST00000552343 FOXR1Q6PIV2 292 aa8.47□□□□□ -1.05
HCFC2-206ENST00000552343 PODNQ7Z5L7 613 aa8.47□□□□□ -1.05
HCFC2-206ENST00000552343 DZIP3Q86Y13 1208 aaKnown RBP8.47□□□□□ -1.05
HCFC2-206ENST00000552343 ACDQ96AP0 544 aa8.47□□□□□ -1.05
HCFC2-206ENST00000552343 ESPNB1AK53 854 aa8.46□□□□□ -1.06
HCFC2-206ENST00000552343 RIPOR1Q6ZS17 1223 aa8.46□□□□□ -1.06
HCFC2-206ENST00000552343 GTF3C3Q9Y5Q9 886 aa8.46□□□□□ -1.06
HCFC2-206ENST00000552343 EPS8L1Q8TE68 723 aa8.45□□□□□ -1.06
HCFC2-206ENST00000552343 CYLDQ9NQC7 956 aa8.45□□□□□ -1.06
HCFC2-206ENST00000552343 GALNT6Q8NCL4 622 aa8.44□□□□□ -1.06
HCFC2-206ENST00000552343 GTPBP3Q969Y2 492 aaKnown RBP8.44□□□□□ -1.06
HCFC2-206ENST00000552343 PPP2R2DQ66LE6 453 aa8.43□□□□□ -1.06
HCFC2-206ENST00000552343 AP1G2O75843 785 aa8.42□□□□□ -1.06
HCFC2-206ENST00000552343 SKIV2LQ15477 1246 aaKnown RBP8.42□□□□□ -1.06
HCFC2-206ENST00000552343 KRTAP1-3Q8IUG1 177 aa8.42□□□□□ -1.06
HCFC2-206ENST00000552343 PROCA1Q8NCQ7 364 aaPredicted RBP8.42□□□□□ -1.06
HCFC2-206ENST00000552343 DYRK1BQ9Y463 629 aa8.42□□□□□ -1.06
HCFC2-206ENST00000552343 ATP5J2-PTCD1G3V325 749 aa8.41□□□□□ -1.06
HCFC2-206ENST00000552343 H7C1W4 665 aa8.41□□□□□ -1.06
HCFC2-206ENST00000552343 MEN1O00255 615 aa8.41□□□□□ -1.06
HCFC2-206ENST00000552343 GPC1P35052 558 aa8.41□□□□□ -1.06
HCFC2-206ENST00000552343 TRERF1Q96PN7 1200 aa8.41□□□□□ -1.06
HCFC2-206ENST00000552343 GAS2L1Q99501 681 aaPredicted RBP8.41□□□□□ -1.06
HCFC2-206ENST00000552343 HMX1Q9NP08 348 aaPredicted RBP8.41□□□□□ -1.06
HCFC2-206ENST00000552343 K7ELQ4 463 aaPredicted RBP8.4□□□□□ -1.06
HCFC2-206ENST00000552343 POU4F2Q12837 409 aa8.4□□□□□ -1.06
HCFC2-206ENST00000552343 SEPT12Q8IYM1 358 aa8.4□□□□□ -1.06
HCFC2-206ENST00000552343 PNMA1Q8ND90 353 aa8.4□□□□□ -1.06
HCFC2-206ENST00000552343 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.4□□□□□ -1.06
HCFC2-206ENST00000552343 LRRC4BQ9NT99 713 aa8.4□□□□□ -1.06
HCFC2-206ENST00000552343 OIP5O43482 229 aa8.39□□□□□ -1.07
HCFC2-206ENST00000552343 MX2P20592 715 aa8.39□□□□□ -1.07
HCFC2-206ENST00000552343 A0A1W2PRU2 124 aa8.38□□□□□ -1.07
HCFC2-206ENST00000552343 KRBA1A5PL33 1030 aa8.38□□□□□ -1.07
HCFC2-206ENST00000552343 SNRPNP63162 240 aaKnown RBP8.38□□□□□ -1.07
HCFC2-206ENST00000552343 ATP1B4Q9UN42 357 aaPredicted RBP8.38□□□□□ -1.07
HCFC2-206ENST00000552343 BAG6P46379 1132 aa8.37□□□□□ -1.07
HCFC2-206ENST00000552343 SH3D19Q5HYK7 790 aa8.37□□□□□ -1.07
HCFC2-206ENST00000552343 SLC27A3Q5K4L6 730 aa8.37□□□□□ -1.07
HCFC2-206ENST00000552343 TRIM52Q96A61 297 aa8.37□□□□□ -1.07
HCFC2-206ENST00000552343 DDRGK1Q96HY6 314 aa8.37□□□□□ -1.07
HCFC2-206ENST00000552343 KDM4CQ9H3R0 1056 aa8.37□□□□□ -1.07
HCFC2-206ENST00000552343 NSFL1CQ9UNZ2 370 aaKnown RBP8.37□□□□□ -1.07
HCFC2-206ENST00000552343 GIGYF1O75420 1035 aaPredicted RBP8.36□□□□□ -1.07
HCFC2-206ENST00000552343 USP17L8P0C7I0 530 aa8.36□□□□□ -1.07
HCFC2-206ENST00000552343 NBPF10Q6P3W6 841 aaKnown RBP8.36□□□□□ -1.07
HCFC2-206ENST00000552343 Q8N3U1 123 aa8.36□□□□□ -1.07
HCFC2-206ENST00000552343 NBPF15Q8N660 670 aa8.36□□□□□ -1.07
HCFC2-206ENST00000552343 GRIP2Q9C0E4 1043 aa8.36□□□□□ -1.07
HCFC2-206ENST00000552343 OXCT2Q9BYC2 517 aaPredicted RBP8.35□□□□□ -1.07
HCFC2-206ENST00000552343 NUCKS1Q9H1E3 243 aaKnown RBP8.35□□□□□ -1.07
HCFC2-206ENST00000552343 NLRP3Q96P20 1036 aa8.34□□□□□ -1.07
HCFC2-206ENST00000552343 SPATA31C2B4DYI2 1134 aa8.33□□□□□ -1.08
HCFC2-206ENST00000552343 SHISA8B8ZZ34 492 aa8.33□□□□□ -1.08
HCFC2-206ENST00000552343 MAP2K3P46734 347 aa8.33□□□□□ -1.08
HCFC2-206ENST00000552343 GPBP1L1Q9HC44 474 aaPredicted RBP8.33□□□□□ -1.08
HCFC2-206ENST00000552343 TIMMDC1Q9NPL8 285 aa8.33□□□□□ -1.08
HCFC2-206ENST00000552343 MKL2Q9ULH7 1088 aa8.33□□□□□ -1.08
HCFC2-206ENST00000552343 F11P03951 625 aa8.32□□□□□ -1.08
HCFC2-206ENST00000552343 FURINP09958 794 aa8.32□□□□□ -1.08
HCFC2-206ENST00000552343 COL8A1P27658 744 aa8.32□□□□□ -1.08
HCFC2-206ENST00000552343 ERVK-9P63128 1117 aa8.32□□□□□ -1.08
HCFC2-206ENST00000552343 WDR44Q5JSH3 913 aa8.32□□□□□ -1.08
HCFC2-206ENST00000552343 CC2D2BQ6DHV5 1058 aa8.32□□□□□ -1.08
HCFC2-206ENST00000552343 C1orf229Q6ZS94 237 aaPredicted RBP8.32□□□□□ -1.08
HCFC2-206ENST00000552343 PCDHB9Q9Y5E1 797 aa8.32□□□□□ -1.08
HCFC2-206ENST00000552343 THBS1P07996 1170 aa8.31□□□□□ -1.08
HCFC2-206ENST00000552343 CLN3Q13286 438 aa8.31□□□□□ -1.08
HCFC2-206ENST00000552343 CFHR5Q9BXR6 569 aa8.31□□□□□ -1.08
HCFC2-206ENST00000552343 TAS1R3Q7RTX0 852 aa8.3□□□□□ -1.08
HCFC2-206ENST00000552343 KLRG1Q96E93 195 aa8.3□□□□□ -1.08
HCFC2-206ENST00000552343 TRIM34Q9BYJ4 488 aa8.3□□□□□ -1.08
HCFC2-206ENST00000552343 ZBBXA8MT70 800 aa8.29□□□□□ -1.08
HCFC2-206ENST00000552343 WASLO00401 505 aaPredicted RBP8.29□□□□□ -1.08
HCFC2-206ENST00000552343 CYP2U1Q7Z449 544 aa8.29□□□□□ -1.08
HCFC2-206ENST00000552343 ALYREFQ86V81 257 aaKnown RBP8.29□□□□□ -1.08
HCFC2-206ENST00000552343 IL27Q8NEV9 243 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms